Defining the RBPome of T helper cells to study higher order post-transcriptional gene regulation
暂无分享,去创建一个
M. Mann | E. Wong | S. Hauck | R. Feederle | Dirk Baumjohann | M. Wierer | Meng Xu | Alexander Reim | A. Geerlof | J. Mautner | V. Heissmeyer | Kai P Hoefig | G. Behrens | E. Glasmacher | Christian Gallus | Taku Ito-Kureha | Kyra A Y Defourny | C. Conrad
[1] Robert F. Harvey,et al. Efficient recovery of the RNA-bound proteome and protein-bound transcriptome using phase separation (OOPS) , 2020, Nature Protocols.
[2] C. Dieterich,et al. Validation strategies for antibodies targeting modified ribonucleotides , 2020, RNA.
[3] Noam Stern-Ginossar,et al. The RNA modification N6-methyladenosine as a novel regulator of the immune system , 2020, Nature Immunology.
[4] M. Wolkers,et al. Dynamic Post-Transcriptional Events Governing CD8+ T Cell Homeostasis and Effector Function. , 2020, Trends in immunology.
[5] Y. Saeys,et al. A human immune dysregulation syndrome characterized by severe hyperinflammation with a homozygous nonsense Roquin-1 mutation , 2019, Nature Communications.
[6] S. Jaffrey,et al. Reading, writing and erasing mRNA methylation , 2019, Nature Reviews Molecular Cell Biology.
[7] K. Hu,et al. EuRBPDB: a comprehensive resource for annotation, functional and oncological investigation of eukaryotic RNA binding proteins (RBPs) , 2019, bioRxiv.
[8] M. Screen,et al. RNA-binding proteins in hematopoiesis and hematological malignancy. , 2019, Blood.
[9] Yun-Cai Liu,et al. The E3 ligase VHL promotes follicular helper T cell differentiation via glycolytic-epigenetic control , 2019, The Journal of experimental medicine.
[10] Robert F. Harvey,et al. Comprehensive identification of RNA–protein interactions in any organism using orthogonal organic phase separation (OOPS) , 2019, Nature Biotechnology.
[11] V. Heissmeyer,et al. Posttranscriptional regulation of T helper cell fate decisions , 2018, The Journal of cell biology.
[12] P. Hubbe,et al. 4EHP-independent repression of endogenous mRNAs by the RNA-binding protein GIGYF2 , 2018, Nucleic acids research.
[13] J. Hackermüller,et al. Binding of NUFIP2 to Roquin promotes recognition and regulation of ICOS mRNA , 2018, Nature Communications.
[14] Matthias W. Hentze,et al. A brave new world of RNA-binding proteins , 2018, Nature Reviews Molecular Cell Biology.
[15] Christopher Y. Park,et al. ZFP36 RNA-binding proteins restrain T cell activation and anti-viral immunity , 2018, bioRxiv.
[16] A. Melnick,et al. Central role of myeloid MCPIP1 in protecting against LPS-induced inflammation and lung injury , 2017, Signal Transduction and Targeted Therapy.
[17] Chuan He,et al. N6-methyladenosine (m6A) recruits and repels proteins to regulate mRNA homeostasis , 2017, Nature Structural &Molecular Biology.
[18] E. Izaurralde,et al. A CAF40-binding motif facilitates recruitment of the CCR4-NOT complex to mRNAs targeted by Drosophila Roquin , 2017, Nature Communications.
[19] E. Kremmer,et al. Generation of Pax1/PAX1-Specific Monoclonal Antibodies. , 2016, Monoclonal antibodies in immunodiagnosis and immunotherapy.
[20] H. Ahlfors,et al. The RNA-Binding Proteins Zfp36l1 and Zfp36l2 Enforce the Thymic β-Selection Checkpoint by Limiting DNA Damage Response Signaling and Cell Cycle Progression , 2016, The Journal of Immunology.
[21] Jeroen Krijgsveld,et al. Comprehensive Identification of RNA-Binding Domains in Human Cells , 2016, Molecular cell.
[22] Santiago Schnell,et al. Disorder Atlas: web-based software for the proteome-based interpretation of intrinsic disorder predictions , 2016, bioRxiv.
[23] P. Bohjanen,et al. Altered CELF1 binding to target transcripts in malignant T cells , 2015, RNA.
[24] S. Hauck,et al. The Proteome of Native Adult Müller Glial Cells From Murine Retina* , 2015, Molecular & Cellular Proteomics.
[25] R. Casellas,et al. MicroRNA-146a regulates ICOS–ICOSL signalling to limit accumulation of T follicular helper cells and germinal centres , 2015, Nature Communications.
[26] Vasilis J. Promponas,et al. LCR-eXXXplorer: a web platform to search, visualize and share data for low complexity regions in protein sequences , 2015, Bioinform..
[27] Chuan He,et al. N6-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions , 2015, Nature.
[28] S. Gerstberger,et al. A census of human RNA-binding proteins , 2014, Nature Reviews Genetics.
[29] E. Kremmer,et al. Cleavage of roquin and regnase-1 by the paracaspase MALT1 releases their cooperatively repressed targets to promote TH17 differentiation , 2014, Nature Immunology.
[30] V. Heissmeyer,et al. Degradation of oligouridylated histone mRNAs: see UUUUU and goodbye , 2014, Wiley interdisciplinary reviews. RNA.
[31] Marco Y. Hein,et al. Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ * , 2014, Molecular & Cellular Proteomics.
[32] E. Vigorito,et al. Noncoding RNA and its associated proteins as regulatory elements of the immune system , 2014, Nature Immunology.
[33] T. Matsui,et al. Posttranscriptional Modulation of Cytokine Production in T Cells for the Regulation of Excessive Inflammation by TFL , 2014, The Journal of Immunology.
[34] Uwe Ohler,et al. Global target mRNA specification and regulation by the RNA-binding protein ZFP36 , 2014, Genome Biology.
[35] U. Atasoy,et al. Posttranscriptional Gene Regulation of IL-17 by the RNA-Binding Protein HuR Is Required for Initiation of Experimental Autoimmune Encephalomyelitis , 2013, The Journal of Immunology.
[36] B. Becher,et al. TGF-β Signalling Is Required for CD4+ T Cell Homeostasis But Dispensable for Regulatory T Cell Function , 2013, PLoS biology.
[37] K. Mark Ansel,et al. MicroRNA-mediated regulation of T helper cell differentiation and plasticity , 2013, Nature Reviews Immunology.
[38] S. Akira,et al. Malt1-Induced Cleavage of Regnase-1 in CD4+ Helper T Cells Regulates Immune Activation , 2013, Cell.
[39] H. Kiyonari,et al. Arid5a controls IL-6 mRNA stability, which contributes to elevation of IL-6 level in vivo , 2013, Proceedings of the National Academy of Sciences.
[40] Ming C. Hammond,et al. Roquin Promotes Constitutive mRNA Decay via a Conserved Class of Stem-Loop Recognition Motifs , 2013, Cell.
[41] V. Heissmeyer,et al. Molecular control of Tfh‐cell differentiation by Roquin family proteins , 2013, Immunological reviews.
[42] H. Blum,et al. Roquin paralogs 1 and 2 redundantly repress the Icos and Ox40 costimulator mRNAs and control follicular helper T cell differentiation. , 2013, Immunity.
[43] Michael T. McManus,et al. T cell activation induces proteasomal degradation of Argonaute and rapid remodeling of the microRNA repertoire , 2013, The Journal of experimental medicine.
[44] E. Kremmer,et al. Eri1 degrades the stem-loop of oligouridylated histone mRNAs to induce replication-dependent decay , 2012, Nature Structural &Molecular Biology.
[45] Norman E. Davey,et al. Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins , 2012, Cell.
[46] Guangchuang Yu,et al. clusterProfiler: an R package for comparing biological themes among gene clusters. , 2012, Omics : a journal of integrative biology.
[47] Brian Burke,et al. A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells , 2012, The Journal of cell biology.
[48] Jinshui Fan,et al. Coordinate Regulation of GATA-3 and Th2 Cytokine Gene Expression by the RNA-Binding Protein HuR , 2011, The Journal of Immunology.
[49] M. Mann,et al. Andromeda: a peptide search engine integrated into the MaxQuant environment. , 2011, Journal of proteome research.
[50] E. Kremmer,et al. Roquin binds inducible costimulator mRNA and effectors of mRNA decay to induce microRNA-independent post-transcriptional repression , 2010, Nature Immunology.
[51] Michael R. Vanner,et al. Phonon-tunnelling dissipation in mechanical resonators , 2010, Nature communications.
[52] R. Jaenisch,et al. Loss of Cardiac microRNA-Mediated Regulation Leads to Dilated Cardiomyopathy and Heart Failure , 2009, Circulation research.
[53] M. Mann,et al. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification , 2008, Nature Biotechnology.
[54] J. Keene. RNA regulons: coordination of post-transcriptional events , 2007, Nature Reviews Genetics.
[55] R. Copley,et al. A RING-type ubiquitin ligase family member required to repress follicular helper T cells and autoimmunity , 2005, Nature.
[56] J. Peyman. Mammalian Expression Cloning of Two Human Trophoblast Suppressors of Major Histocompatibility Complex Genes , 2001, American journal of reproductive immunology.
[57] S. Akira. Regnase-1, a ribonuclease involved in the regulation of immune responses. , 2013, Cold Spring Harbor symposia on quantitative biology.
[58] D. Hodson,et al. An emerging role of RNA-binding proteins as multifunctional regulators of lymphocyte development and function. , 2012, Advances in immunology.
[59] J. Peyman. Repression of major histocompatibility complex genes by a human trophoblast ribonucleic acid. , 1999, Biology of reproduction.