Simultaneous smoothing and estimation of the tensor field from diffusion tensor MRI

Diffusion tensor magnetic resonance imaging (DT-MRI) is a relatively new imaging modality in the field of medical imaging. This modality of imaging allows one to capture the structural connectivity if any between functionally meaningful regions for example, in the brain. The data however can be noisy and requires restoration. In this paper, we present a unified model for simultaneous smoothing and estimation of diffusion tensor field from DT-MRI. The diffusion tensor field is estimated directly from the raw data with L/sup P/ smoothness and positive definiteness constraints. The data term we employ is from the original Stejskal-Tanner equation instead of the linearized version as usually done in literature. In addition, we use Cholesky decomposition to ensure positive definiteness of the diffusion tensor. The unified model is discretized and solved numerically using limited memory quasi-Newton method. Both synthetic and real data experiments are shown to depict the algorithm performance.

[1]  G. M.,et al.  Partial Differential Equations I , 2023, Applied Mathematical Sciences.

[2]  Alex T. Pang,et al.  Spray rendering: Visualization using smart particles , 1993, Proceedings Visualization '93.

[3]  Carl-Fredrik Westin,et al.  Processing and visualization for diffusion tensor MRI , 2002, Medical Image Anal..

[4]  Rachid Deriche,et al.  Constrained Flows of Matrix-Valued Functions: Application to Diffusion Tensor Regularization , 2002, ECCV.

[5]  Tony F. Chan,et al.  Color TV: total variation methods for restoration of vector-valued images , 1998, IEEE Trans. Image Process..

[6]  P. Basser,et al.  Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. , 1996, Journal of magnetic resonance. Series B.

[7]  J. Schnabel,et al.  Nonlinear smoothing for reduction of systematic and random errors in diffusion tensor imaging , 2000, Journal of magnetic resonance imaging : JMRI.

[8]  Simon R. Arridge,et al.  A Regularization Scheme for Diffusion Tensor Magnetic Resonance Images , 2001, IPMI.

[9]  G. G. Stokes "J." , 1890, The New Yale Book of Quotations.

[10]  Isabelle Bloch,et al.  Towards inference of human brain connectivity from MR diffusion tensor data , 2001, Medical Image Anal..

[11]  B. Vemuri,et al.  Fiber tract mapping from diffusion tensor MRI , 2001, Proceedings IEEE Workshop on Variational and Level Set Methods in Computer Vision.

[12]  P. Basser,et al.  Estimation of the effective self-diffusion tensor from the NMR spin echo. , 1994, Journal of magnetic resonance. Series B.

[13]  R. Deriche,et al.  Regularization of orthonormal vector sets using coupled PDE's , 2001, Proceedings IEEE Workshop on Variational and Level Set Methods in Computer Vision.