Genome-scale profiling of histone H3.3 replacement patterns

[1]  Lani F. Wu,et al.  Genome-Scale Identification of Nucleosome Positions in S. cerevisiae , 2005, Science.

[2]  T. Straub,et al.  Dosage compensation in flies: Mechanism, models, mystery , 2005, FEBS letters.

[3]  B. Séraphin,et al.  Cryptic Pol II Transcripts Are Degraded by a Nuclear Quality Control Pathway Involving a New Poly(A) Polymerase , 2005, Cell.

[4]  B. Steensel.  Mapping of genetic and epigenetic regulatory networks using microarrays , 2005, Nature Genetics.

[5]  Brian E. Schwartz,et al.  Transcriptional activation triggers deposition and removal of the histone variant H3.3. , 2005, Genes & development.

[6]  A. Pombo,et al.  Variant histone H3.3 marks promoters of transcriptionally active genes during mammalian cell division , 2005, EMBO reports.

[7]  J. Hayes,et al.  Replication-independent core histone dynamics at transcriptionally active loci in vivo. , 2005, Genes & development.

[8]  R. Paro,et al.  Intergenic transcription through a polycomb group response element counteracts silencing. , 2005, Genes & development.

[9]  Martin Radolf,et al.  The profile of repeat‐associated histone lysine methylation states in the mouse epigenome , 2005, The EMBO journal.

[10]  E. Schadt,et al.  Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments. , 2005, Trends in genetics : TIG.

[11]  Eric S. Lander,et al.  Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse , 2005, Cell.

[12]  David M MacAlpine,et al.  Coordination of replication and transcription along a Drosophila chromosome. , 2004, Genes & development.

[13]  Kevin Struhl,et al.  Evidence for Eviction and Rapid Deposition of Histones upon Transcriptional Elongation by RNA Polymerase II , 2004, Molecular and Cellular Biology.

[14]  A. Kristjuhan,et al.  Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo , 2004, The EMBO journal.

[15]  Shireen A. Sarraf,et al.  Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly. , 2004, Molecular cell.

[16]  S. Schreiber,et al.  Global nucleosome occupancy in yeast , 2004, Genome Biology.

[17]  J. Lieb,et al.  Evidence for nucleosome depletion at active regulatory regions genome-wide , 2004, Nature Genetics.

[18]  David Landsman,et al.  High-resolution genome-wide mapping of histone modifications , 2004, Nature Biotechnology.

[19]  Steven Henikoff,et al.  Histone variants, nucleosome assembly and epigenetic inheritance. , 2004, Trends in genetics : TIG.

[20]  D. Reinberg,et al.  Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27. , 2004, Genes & development.

[21]  Saeed Tavazoie,et al.  Mapping Global Histone Acetylation Patterns to Gene Expression , 2004, Cell.

[22]  Charles Kooperberg,et al.  The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote. , 2004, Genes & development.

[23]  Thomas Ried,et al.  From Silencing to Gene Expression Real-Time Analysis in Single Cells , 2004, Cell.

[24]  Philip R. Gafken,et al.  Histone H3.3 is enriched in covalent modifications associated with active chromatin. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[25]  J. Workman,et al.  Histone H3 variants and modifications on transcribed genes. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[26]  G. Almouzni,et al.  Histone H3.1 and H3.3 Complexes Mediate Nucleosome Assembly Pathways Dependent or Independent of DNA Synthesis , 2004, Cell.

[27]  Lianna Johnson,et al.  Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications. , 2004, Nucleic acids research.

[28]  F. Castellino,et al.  Rapid selection of Drosophila S2 cells with the puromycin resistance gene. , 2003, BioTechniques.

[29]  Patrick Rodriguez,et al.  Efficient biotinylation and single-step purification of tagged transcription factors in mammalian cells and transgenic mice , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[30]  H. Reinke,et al.  Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter. , 2003, Molecular cell.

[31]  J Seth Strattan,et al.  Nucleosomes unfold completely at a transcriptionally active promoter. , 2003, Molecular cell.

[32]  R. Paro,et al.  Transcription through Intergenic Chromosomal Memory Elements of the Drosophila Bithorax Complex Correlates with an Epigenetic Switch , 2002, Molecular and Cellular Biology.

[33]  F. Karch,et al.  Transcription through the iab-7 cis-regulatory domain of the bithorax complex interferes with maintenance of Polycomb-mediated silencing. , 2002, Development.

[34]  S. Henikoff,et al.  The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly. , 2002, Molecular cell.

[35]  Gary H Karpen,et al.  Conserved organization of centromeric chromatin in flies and humans. , 2002, Developmental cell.

[36]  C. Allis,et al.  Linking Global Histone Acetylation to the Transcription Enhancement of X-chromosomal Genes in Drosophila Males* , 2001, The Journal of Biological Chemistry.

[37]  S. Henikoff,et al.  Centromeres Are Specialized Replication Domains in Heterochromatin , 2001, The Journal of cell biology.

[38]  P. Fraser,et al.  Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus. , 2000, Molecular cell.

[39]  S. Henikoff,et al.  Heterochromatic deposition of centromeric histone H3-like proteins. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[40]  D. Beckett,et al.  A minimal peptide substrate in biotin holoenzyme synthetase‐catalyzed biotinylation , 2008, Protein science : a publication of the Protein Society.

[41]  Ryuji Kobayashi,et al.  The RCAF complex mediates chromatin assembly during DNA replication and repair , 1999, Nature.

[42]  Ash A. Alizadeh,et al.  Genome-wide analysis of DNA copy-number changes using cDNA microarrays , 1999, Nature Genetics.

[43]  M. Kuroda,et al.  Complex formation by the Drosophila MSL proteins: role of the MSL2 RING finger in protein complex assembly , 1998, The EMBO journal.

[44]  G. Echalier.  Drosophila cells in culture , 1997 .

[45]  S. Henikoff,et al.  Unwinding dosage compensation , 1993, Cell.

[46]  Nature Genetics , 1991, Nature.

[47]  J. H. Waterborg.  Sequence analysis of acetylation and methylation in two histone H3 variants of alfalfa. , 1990, The Journal of biological chemistry.

[48]  L. Goldstein,et al.  Characterization and use of the Drosophila metallothionein promoter in cultured Drosophila melanogaster cells. , 1988, Nucleic acids research.

[49]  D. Hogness,et al.  Novel transcripts from the Ultrabithorax domain of the bithorax complex. , 1987, Genes & development.

[50]  Claudio Nicolini,et al.  Chromatin Structure and Function , 1979, NATO Advanced Study Institutes Series.