Bac to the future: The use of bac transgenic mice for neuroscience research

The development of methods for engineering bacterial artificial chromosomes (BACs), and for the efficient production of BAC transgenic mice, has allowed the design of in vivo approaches to the analysis of gene expression and function in the brain, which could not be accomplished using traditional methods. These strategies have shed light on the functions of single genes in the nervous system, and will accelerate the use of functional genomic approaches to neuroscience research.

[1]  C. Payne,et al.  Granulation Rescue and Developmental Marking of Juxtaglomerular Cells Using “Piggy-BAC” Recombination of the Mouse RenLocus* , 2000, The Journal of Biological Chemistry.

[2]  Richard Axel,et al.  Visualizing an Olfactory Sensory Map , 1996, Cell.

[3]  G. Kelsey,et al.  A yeast artificial chromosome covering the tyrosinase gene confers copy number-dependent expression in transgenic mice , 1993, Nature.

[4]  P. Rigby,et al.  A BAC transgenic analysis of the Mrf4/Myf5 locus reveals interdigitated elements that control activation and maintenance of gene expression during muscle development. , 2001, Development.

[5]  M. Doughty,et al.  BAC-mediated gene-dosage analysis reveals a role for Zipro1 (Ru49/Zfp38) in progenitor cell proliferation in cerebellum and skin , 1999, Nature Genetics.

[6]  P Chambon,et al.  Segmentation and specification in the branchial region of the head: the role of the Hox selector genes. , 1998, The International journal of developmental biology.

[7]  H. Zoghbi,et al.  Insights from mouse models into the molecular basis of neurodegeneration. , 2000, Annual review of physiology.

[8]  Jan-Fang Cheng,et al.  Functional screening of 2 Mb of human chromosome 21q22.2 in transgenic mice implicates minibrain in learning defects associated with Down syndrome , 1997, Nature Genetics.

[9]  Bernd Fritzsch,et al.  Visualization of alpha9 acetylcholine receptor expression in hair cells of transgenic mice containing a modified bacterial artificial chromosome. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[10]  D. Court,et al.  A highly efficient Escherichia coli-based chromosome engineering system adapted for recombinogenic targeting and subcloning of BAC DNA. , 2001, Genomics.

[11]  C. Dulac Cloning of genes from single neurons. , 1998, Current topics in developmental biology.

[12]  M Yuzaki,et al.  Purification of Purkinje cells by fluorescence‐activated cell sorting from transgenic mice that express green fluorescent protein , 2001, The European journal of neuroscience.

[13]  Hermann Bujard,et al.  Tetracycline-regulated gene expression in the brain , 2000, Current Opinion in Neurobiology.

[14]  R. Krumlauf,et al.  Hox codes and positional specification in vertebrate embryonic axes. , 1992, Annual review of cell biology.

[15]  H. Lester,et al.  ROMK1 (Kir1.1) causes apoptosis and chronic silencing of hippocampal neurons. , 2000, Journal of neurophysiology.

[16]  Thomas C. Südhof,et al.  The Synaptic VesicleCycle Revisited , 2000, Neuron.

[17]  Minoru Tanaka,et al.  Positional Cloning of the Mouse Circadian Clock Gene , 1997, Cell.

[18]  R. Mains,et al.  Inducible Genetic Suppression of Neuronal Excitability , 1999, The Journal of Neuroscience.

[19]  R. Roeder,et al.  Ligand induction of a transcriptionally active thyroid hormone receptor coactivator complex. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[20]  J. Derry,et al.  Transgenic rescue of the tattered phenotype by using a BAC encoding Ebp , 2001, Mammalian Genome.

[21]  Peter Mombaerts,et al.  Olfactory coding: Revealing intrinsic representations of odors , 2001, Current Biology.

[22]  M. Callow,et al.  Expression of human apolipoprotein B and assembly of lipoprotein(a) in transgenic mice. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[23]  D. Clapham,et al.  Molecular Determinants for Subcellular Localization of PSD-95 with an Interacting K+ Channel , 1999, Neuron.

[24]  Claire-Anne Gutekunst,et al.  A YAC Mouse Model for Huntington’s Disease with Full-Length Mutant Huntingtin, Cytoplasmic Toxicity, and Selective Striatal Neurodegeneration , 1999, Neuron.

[25]  Y. Raphael,et al.  Correction of deafness in shaker-2 mice by an unconventional myosin in a BAC transgene. , 1998, Science.

[26]  H. Zoghbi,et al.  Glutamine repeats and neurodegeneration. , 2000, Annual review of neuroscience.

[27]  L. Liotta,et al.  Laser capture microdissection. , 2006, Methods in molecular biology.

[28]  W. Hammerschmidt,et al.  Cloning and mutagenesis of a herpesvirus genome as an infectious bacterial artificial chromosome. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[29]  M. Hatten,et al.  Brain lipid-binding protein (BLBP): A novel signaling system in the developing mammalian CNS , 1994, Neuron.

[30]  F. Grosveld,et al.  Modification of human beta-globin locus PAC clones by homologous recombination in Escherichia coli. , 2000, Nucleic acids research.

[31]  T. Anderson,et al.  Epitope tagging: general method for tracking recombinant proteins. , 2000, Methods in enzymology.

[32]  Eric R Kandel,et al.  Local protein synthesis and its role in synapse-specific plasticity , 2000, Current Opinion in Neurobiology.

[33]  N. Heintz,et al.  A strategy for the analysis of gene expression during neural development. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[34]  G. Kelsey,et al.  Transgenic mice generated by pronuclear injection of a yeast artificial chromosome. , 1992, Nucleic acids research.

[35]  E. Martínez-Salas Internal ribosome entry site biology and its use in expression vectors. , 1999, Current opinion in biotechnology.

[36]  Frank Buchholz,et al.  A new logic for DNA engineering using recombination in Escherichia coli , 1998, Nature Genetics.

[37]  R. Plasterk,et al.  The complete family of genes encoding G proteins of Caenorhabditis elegans , 1999, Nature Genetics.

[38]  M. Wines,et al.  Physical localization of the mesoderm development (mesd) functional region. , 2000, Genomics.

[39]  B. Mignotte,et al.  Mitochondria and apoptosis. , 1998, European journal of biochemistry.

[40]  H. Okano,et al.  A Genetic Approach to Visualization of Multisynaptic Neural Pathways Using Plant Lectin Transgene , 1999, Neuron.

[41]  D. Lancet,et al.  The molecular basis of odor recognition , 1987 .

[42]  C. Huxley Exploring gene function: use of yeast artificial chromosome transgenesis. , 1998, Methods.

[43]  N. Heintz,et al.  Homologous recombination based modification in Esherichia coli and germline transmission in transgenic mice of a bacterial artificial chromsome , 1997, Nature Biotechnology.

[44]  O. Steward,et al.  Protein synthesis at synaptic sites on dendrites. , 2001, Annual review of neuroscience.

[45]  B. Birren,et al.  Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[46]  Elizabeth,et al.  Analysis of the Human {-Globin Gene Promoter in Transgenic Mice , 2003 .

[47]  K. Mikoshiba,et al.  Functional expression of a mammalian odorant receptor. , 1998, Science.

[48]  S. Wagner,et al.  Amyloid production and deposition in mutant amyloid precursor protein and presenilin-1 yeast artificial chromosome transgenic mice , 1999, Nature Neuroscience.

[49]  C. Dulac 14 Cloning of Genes from Single Neurons , 1997 .

[50]  H. Orr,et al.  Beyond the Qs in the polyglutamine diseases. , 2001, Genes & development.

[51]  B. Paw,et al.  Modification of bacterial artificial chromosomes through chi-stimulated homologous recombination and its application in zebrafish transgenesis. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[52]  Jacqueline K. White,et al.  Length-dependent gametic CAG repeat instability in the Huntington's disease knock-in mouse. , 1999, Human molecular genetics.

[53]  Paul Scherz,et al.  Defining brain wiring patterns and mechanisms through gene trapping in mice , 2001, Nature.

[54]  N. Perrimon New advances in Drosophila provide opportunities to study gene functions. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[55]  Anne-Marie Chang,et al.  Functional Identification of the Mouse Circadian Clock Gene by Transgenic BAC Rescue , 1997, Cell.

[56]  Bernardo L. Sabatini,et al.  Analysis of calcium channels in single spines using optical fluctuation analysis , 2000, Nature.

[57]  K. Frazer,et al.  The apolipoprotein(a) gene is regulated by sex hormones and acute–phase inducers in YAC transgenic mice , 1995, Nature Genetics.

[58]  L. Buck,et al.  A genetic approach to trace neural circuits. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[59]  Leonard K. Kaczmarek,et al.  Targeted Attenuation of Electrical Activity in Drosophila Using a Genetically Modified K+ Channel , 2001, Neuron.

[60]  D. Mccormick Sequence the Human Genome , 1986, Bio/Technology.

[61]  S. West,et al.  Exchanging partners: recombination in E. coli. , 1996, Trends in genetics : TIG.

[62]  C. Amemiya,et al.  A new bacteriophage P1–derived vector for the propagation of large human DNA fragments , 1994, Nature Genetics.

[63]  O. Steward,et al.  mRNA Localization in Neurons: A Multipurpose Mechanism? , 1997, Neuron.

[64]  S. Fields,et al.  A novel genetic system to detect protein–protein interactions , 1989, Nature.

[65]  J. V. Moran,et al.  Initial sequencing and analysis of the human genome. , 2001, Nature.

[66]  G. Rubin,et al.  The Role of the Genome Project in Determining Gene Function: Insights from Model Organisms , 1996, Cell.

[67]  G. Stamatoyannopoulos,et al.  Analysis of the human zeta-globin gene promoter in transgenic mice. , 1993, Blood.

[68]  Heikyung Suh,et al.  Coordinate regulation of RAG1 and RAG2 by cell type-specific DNA elements 5' of RAG2. , 1999, Science.

[69]  R. Krumlauf,et al.  Patterning the cranial neural crest: Hinbrain segmentation and hox gene plasticity , 2000, Nature Reviews Neuroscience.

[70]  J. Ragoussis,et al.  Yeast artificial chromosome vectors. , 1995, Molecular and cell biology of human diseases series.

[71]  T. Südhof,et al.  The synaptic vesicle cycle revisited. , 2000, Neuron.

[72]  J. Friedman,et al.  Virus-Assisted Mapping of Neural Inputs to a Feeding Center in the Hypothalamus , 2001, Science.

[73]  M. Ross,et al.  Changing patterns of gene expression define four stages of cerebellar granule neuron differentiation. , 1993, Development.

[74]  F. Cross,et al.  The CLN gene family: central regulators of cell cycle Start in budding yeast. , 1995, Progress in cell cycle research.

[75]  R. Guillery Histology of the Nervous System by Santiago Ramón y Cajal. Translated into English from the French edition by Neely Swanson and Larry W. Swanson, Oxford University Press, 1995. $195.00 (1672 pp) ISBN 0 19 507 4017 , 1996, Trends in Neurosciences.

[76]  M. Surani,et al.  Imprinted expression of neuronatin from modified BAC transgenes reveals regulation by distinct and distant enhancers. , 2001, Developmental biology.

[77]  D. Wilkinson Genetic control of segmentation in the vertebrate hindbrain. , 1995, Perspectives on developmental neurobiology.

[78]  P Siekevitz,et al.  The structure of postsynaptic densities isolated from dog cerebral cortex: II. characterization and arrangement of some of the major proteins within the structure , 1977, The Journal of cell biology.

[79]  B. Chait,et al.  The Yeast Nuclear Pore Complex: Composition, Architecture, and Transport Mechanism , 2000 .

[80]  R. Scheller,et al.  Mechanisms of synaptic vesicle exocytosis. , 2000, Annual review of cell and developmental biology.

[81]  Andrew Lumsden,et al.  Patterning the Vertebrate Neuraxis , 1996, Science.

[82]  M. Kennedy,et al.  Signal-processing machines at the postsynaptic density. , 2000, Science.

[83]  D. Broderick,et al.  Properties and evolutionary potential of newly induced tandem duplications in Drosophila melanogaster. , 1982, Genetics.

[84]  R. Axel,et al.  A novel multigene family may encode odorant receptors: A molecular basis for odor recognition , 1991, Cell.

[85]  K. Rajewsky,et al.  Deletion of a DNA polymerase beta gene segment in T cells using cell type-specific gene targeting. , 1994, Science.

[86]  A. Coulson,et al.  Genome linking with yeast artificial chromosomes , 1988, Nature.

[87]  P. Rørth,et al.  A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. , 1996, Proceedings of the National Academy of Sciences of the United States of America.