Massively Parallel Evolutionary Computation on GPGPUs
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[1] Weihang Zhu,et al. Massively parallel differential evolution—pattern search optimization with graphics hardware acceleration: an investigation on bound constrained optimization problems , 2011, J. Glob. Optim..
[2] Dmitri Yudanov,et al. GPU-based implementation of real-time system for spiking neural networks , 2009 .
[3] Siu-Ming Yiu,et al. SOAP3: ultra-fast GPU-based parallel alignment tool for short reads , 2012, Bioinform..
[4] Andrew J. Page,et al. Framework for Task Scheduling in Heterogeneous Distributed Computing Using Genetic Algorithms , 2005, Artificial Intelligence Review.
[5] Nikolaos V. Sahinidis,et al. GPU-BLAST: using graphics processors to accelerate protein sequence alignment , 2010, Bioinform..
[6] Jörn Loviscach,et al. Evolutionary Design of BRDFs , 2003, Eurographics.
[7] George D. Magoulas,et al. Strategies to minimise the total run time of cyclic graph based genetic programming with GPUs , 2009, GECCO '09.
[8] William B. Langdon. Initial experiences of the Emerald: e-Infrastructure South GPU supercomputer , 2012 .
[9] Raghavendra D. Prabhu,et al. SOMGPU: An unsupervised pattern classifier on Graphical Processing Unit , 2008, 2008 IEEE Congress on Evolutionary Computation (IEEE World Congress on Computational Intelligence).
[10] George D. Magoulas,et al. Identifying similarities in TMBL programs with alignment to quicken their compilation for GPUs: computational intelligence on consumer games and graphics hardware , 2011, GECCO '11.
[11] Fatos Xhafa,et al. Genetic algorithm based schedulers for grid computing systems , 2007 .
[12] Gang Wang,et al. MrBayes on a Graphics Processing Unit , 2011, Bioinform..
[13] Peter J. Bentley,et al. Systemic Computation Using Graphics Processors , 2010, ICES.
[14] Can Yang,et al. GBOOST: a GPU-based tool for detecting gene-gene interactions in genome-wide case control studies , 2011, Bioinform..
[15] Suvranu De,et al. CUDA-based Real Time Surgery Simulation , 2008, MMVR.
[16] Alexandros Stamatakis,et al. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models , 2006, Bioinform..
[17] Weiguo Liu,et al. Bio-sequence database scanning on a GPU , 2006, Proceedings 20th IEEE International Parallel & Distributed Processing Symposium.
[18] P. S. Thiagarajan,et al. Approximate probabilistic analysis of biopathway dynamics , 2012, Bioinform..
[19] Václav Snásel,et al. Many-threaded implementation of differential evolution for the CUDA platform , 2011, GECCO '11.
[20] William B. Langdon,et al. GP on SPMD parallel graphics hardware for mega Bioinformatics data mining , 2008, Soft Comput..
[21] Amit Konar,et al. Automatic Hard Clustering Using Improved Differential Evolution Algorithm , 2009 .
[22] Shin Yoo,et al. Evolving Human Competitive Spectra-Based Fault Localisation Techniques , 2012, SSBSE.
[23] Chee Keong Kwoh,et al. CBESW: Sequence Alignment on the Playstation 3 , 2008, BMC Bioinformatics.
[24] Wolfgang Banzhaf,et al. Deployment of CPU and GPU-based genetic programming on heterogeneous devices , 2009, GECCO '09.
[25] Nicolas Lachiche,et al. Fast Evaluation of GP Trees on GPGPU by Optimizing Hardware Scheduling , 2010, EuroGP.
[26] William B. Langdon,et al. Generalisation in genetic programming , 2011, GECCO.
[27] Peter Nordin,et al. A compiling genetic programming system that directly manipulates the machine-code , 1994 .
[28] Nicolas Lachiche,et al. Coarse grain parallelization of evolutionary algorithms on GPGPU cards with EASEA , 2009, GECCO.
[29] Václav Snásel,et al. Differential Evolution and Genetic Algorithms for the Linear Ordering Problem , 2009, KES.
[30] Václav Snásel,et al. Comparison of Heuristics for Scheduling Independent Tasks on Heterogeneous Distributed Environments , 2009, 2009 International Joint Conference on Computational Sciences and Optimization.
[31] Ajith Abraham,et al. A modified differential evolution for autonomous deployment and localization of sensor nodes , 2011, GECCO '11.
[32] Jose L. Contreras-Vidal,et al. Development of a Large-Scale Integrated Neurocognitive Architecture Part 2: Design and Architecture , 2006 .
[33] W. Langdon,et al. RNAnet a Map of Human Gene Expression , 2010, 1001.4263.
[34] Andrew Lim,et al. Designing A Hybrid Genetic Algorithm for the Linear Ordering Problem , 2003, GECCO.
[35] Wolfgang Banzhaf,et al. Linear genetic programming GPGPU on Microsoft’s Xbox 360 , 2008, 2008 IEEE Congress on Evolutionary Computation (IEEE World Congress on Computational Intelligence).
[36] Cyril Fonlupt,et al. Population Parallel GP on the G80 GPU , 2008, EuroGP.
[37] Cyril Fonlupt,et al. High performance genetic programming on GPU , 2009, BADS '09.
[38] William B. Langdon,et al. Creating and Debugging Performance CUDA C , 2012, Parallel Architectures and Bioinspired Algorithms.
[39] J. Mitchell,et al. Solving Linear Ordering Problems with a Combined Interior Pointtsimplex Cutting Plane Algorithm * , 1999 .
[40] Jack J. Dongarra,et al. Experiments with Scheduling Using Simulated Annealing in a Grid Environment , 2002, GRID.
[41] Martín Pedemonte,et al. PUGACE, a cellular Evolutionary Algorithm framework on GPUs , 2010, IEEE Congress on Evolutionary Computation.
[42] P. Hall,et al. An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[43] Jan Platos,et al. Differential Evolution for Scheduling Independent Tasks on Heterogeneous Distributed Environments , 2010 .
[44] Renato A. Krohling,et al. Differential evolution algorithm on the GPU with C-CUDA , 2010, IEEE Congress on Evolutionary Computation.
[45] David Fernández-Baca,et al. Allocating Modules to Processors in a Distributed System , 1989, IEEE Trans. Software Eng..
[46] Giorgio Valle,et al. CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment , 2008, BMC Bioinformatics.
[47] Jason Lawrence,et al. Genetic programming for shader simplification , 2011, ACM Trans. Graph..
[48] William B. Langdon,et al. Genetic Programming in Data Mining for Drug Discovery , 2005 .
[49] Gerhard Reinelt,et al. A benchmark library and a comparison of heuristic methods for the linear ordering problem , 2012, Comput. Optim. Appl..
[50] Michael P. H. Stumpf,et al. GPU accelerated biochemical network simulation , 2011, Bioinform..
[51] William B. Langdon. Large Scale Bioinformatics Data Mining with Parallel Genetic Programming on Graphics Processing Units , 2010, Parallel and Distributed Computational Intelligence.
[52] Jens H. Krüger,et al. A Survey of General‐Purpose Computation on Graphics Hardware , 2007, Eurographics.
[53] Man Leung Wong,et al. Parallel multi-objective evolutionary algorithms on graphics processing units , 2009, GECCO '09.
[54] Martín Pedemonte,et al. Bitwise operations for GPU implementation of genetic algorithms , 2011, GECCO '11.
[55] Fred W. Glover,et al. An Experimental Evaluation of a Scatter Search for the Linear Ordering Problem , 2001, J. Glob. Optim..
[56] Thomas Stützle,et al. Search Space Analysis of the Linear Ordering Problem , 2003, EvoWorkshops.
[57] William B. Langdon,et al. A Many Threaded CUDA Interpreter for Genetic Programming , 2010, EuroGP.
[58] William B. Langdon,et al. Graphics processing units and genetic programming: an overview , 2011, Soft Comput..
[59] R. Storn,et al. Differential Evolution - A simple and efficient adaptive scheme for global optimization over continuous spaces , 2004 .
[60] William B. Langdon,et al. A fast high quality pseudo random number generator for nVidia CUDA , 2009, GECCO '09.
[61] James E. Baker,et al. Reducing Bias and Inefficienry in the Selection Algorithm , 1987, ICGA.
[62] Gerhard Reinelt,et al. The Linear Ordering Problem: Exact and Heuristic Methods in Combinatorial Optimization , 2011 .
[63] Rainer Storn,et al. Differential evolution design of an IIR-filter , 1996, Proceedings of IEEE International Conference on Evolutionary Computation.
[64] William B. Langdon,et al. Genetic Programming for Mining DNA Chip Data from Cancer Patients , 2004, Genetic Programming and Evolvable Machines.
[65] John Levine,et al. A hybrid ant algorithm for scheduling independent jobs in heterogeneous computing environments , 2004 .
[66] William B. Langdon. Distilling GeneChips with Genetic Programming on the Emerald GPU supercomputer , 2012 .
[67] Jian-Zhong Li,et al. Performance Analysis of Task Scheduling Heuristics in Grid , 2007, 2007 International Conference on Machine Learning and Cybernetics.
[68] Mark Harman,et al. Evolving a CUDA kernel from an nVidia template , 2010, IEEE Congress on Evolutionary Computation.
[69] Noel Lopes,et al. High-performance bankruptcy prediction model using Graphics Processing Units , 2010, The 2010 International Joint Conference on Neural Networks (IJCNN).
[70] John D. Owens,et al. GPU Computing , 2008, Proceedings of the IEEE.
[71] Cyril Fonlupt,et al. Genetic programming on graphics processing units , 2009, Genetic Programming and Evolvable Machines.
[72] Matteo Fischetti,et al. The Linear Ordering Problem with cumulative costs , 2008, Eur. J. Oper. Res..
[73] Daniel A. Ashlock,et al. Evolutionary computation for modeling and optimization , 2005 .
[74] William B. Langdon,et al. A SIMD Interpreter for Genetic Programming on GPU Graphics Cards , 2007, EuroGP.
[75] Tatsuo Unemi,et al. SBArt4 — Breeding abstract animations in realtime , 2010, IEEE Congress on Evolutionary Computation.
[76] Zhongwen Luo,et al. Artificial neural network computation on graphic process unit , 2005, Proceedings. 2005 IEEE International Joint Conference on Neural Networks, 2005..
[77] Asim Munawar,et al. Hybrid of genetic algorithm and local search to solve MAX-SAT problem using nVidia CUDA framework , 2009, Genetic Programming and Evolvable Machines.
[78] Andries P. Engelbrecht,et al. Computational Intelligence: An Introduction , 2002 .
[79] George D. Magoulas,et al. TMBL kernels for CUDA GPUs compile faster using PTX: computational intelligence on consumer games and graphics hardware , 2011, GECCO '11.
[80] Riccardo Poli,et al. Foundations of Genetic Programming , 1999, Springer Berlin Heidelberg.
[81] Václav Snásel,et al. Optimization of Turbo Codes by Differential Evolution and Genetic Algorithms , 2009, 2009 Ninth International Conference on Hybrid Intelligent Systems.
[82] William B. Langdon. Debugging CUDA , 2011, GECCO '11.
[83] Nicolas Lachiche,et al. EASEA parallelization of tree-based Genetic Programming , 2010, IEEE Congress on Evolutionary Computation.
[84] Gerhard Reinelt,et al. The linear ordering problem: algorithms and applications , 1985 .
[85] G.E. Moore,et al. Cramming More Components Onto Integrated Circuits , 1998, Proceedings of the IEEE.
[86] Michael O'Neill,et al. Acceleration of grammatical evolution using graphics processing units: computational intelligence on consumer games and graphics hardware , 2011, GECCO.
[87] Jirí Jaros,et al. Parallel Genetic Algorithm on the CUDA Architecture , 2010, EvoApplications.
[88] Václav Snásel,et al. Evolving Schedules of Independent Tasks by Differential Evolution , 2011, Intelligent Networking, Collaborative Systems and Applications.
[89] Krister Wolff,et al. Evolving 3D model interpretation of images using graphics hardware , 2002, Proceedings of the 2002 Congress on Evolutionary Computation. CEC'02 (Cat. No.02TH8600).
[90] Cole Trapnell,et al. Optimizing data intensive GPGPU computations for DNA sequence alignment , 2009, Parallel Comput..
[91] Debashis Ghosh,et al. Feature selection and molecular classification of cancer using genetic programming. , 2007, Neoplasia.
[92] T. Stützle,et al. The Linear Ordering Problem: Instances, Search Space Analysis and Algorithms , 2004 .
[93] Shigeyoshi Tsutsui,et al. A Highly-Parallel TSP Solver for a GPU Computing Platform , 2010, NMA.
[94] Riccardo Poli,et al. A Field Guide to Genetic Programming , 2008 .
[95] George R. Price,et al. Selection and Covariance , 1970, Nature.
[96] Wolfgang Banzhaf,et al. Deployment of parallel linear genetic programming using GPUs on PC and video game console platforms , 2010, Genetic Programming and Evolvable Machines.
[97] El-Ghazali Talbi,et al. Parallel hybrid evolutionary algorithms on GPU , 2010, IEEE Congress on Evolutionary Computation.
[98] William B. Langdon,et al. A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips , 2010, IEEE/ACM Transactions on Computational Biology and Bioinformatics.
[99] R. Storn,et al. Differential Evolution: A Practical Approach to Global Optimization (Natural Computing Series) , 2005 .
[100] David P. Anderson,et al. An analysis of massively distributed evolutionary algorithms , 2010, IEEE Congress on Evolutionary Computation.
[101] Mark Harman,et al. Formal Concept Analysis on Graphics Hardware , 2011, CLA.
[102] Yuji Sato,et al. Acceleration experiment of genetic computations for sudoku solution on multi-core processors , 2011, GECCO '11.
[103] Václav Snásel,et al. Differential evolution for the linear ordering problem implemented on CUDA , 2011, 2011 IEEE Congress of Evolutionary Computation (CEC).
[104] Václav Snásel,et al. Scheduling Independent Tasks on Heterogeneous Distributed Environments by Differential Evolution , 2009, 2009 International Conference on Intelligent Networking and Collaborative Systems.
[105] Ladislau Bölöni,et al. A Comparison of Eleven Static Heuristics for Mapping a Class of Independent Tasks onto Heterogeneous Distributed Computing Systems , 2001, J. Parallel Distributed Comput..
[106] A. A. Maciejewski,et al. Heterogeneous Computing , 2002 .