Diverse Region-Based CNN for Tongue Squamous Cell Carcinoma Classification With Raman Spectroscopy

Border discrimination is very important in the treatment of tongue squamous cell carcinoma (TSCC). This study proposes an ensemble convolutional neural network (CNN) framework based on fiber optic Raman spectroscopy and deep learning techniques to distinguish between TSCC and non-tumor tissue frameworks. First, the data used in the experiments was collected by a fiber optic Raman system. A total of 44 tissues of 22 patients were collected for Raman spectroscopy, with TSCC and adjacent normal tissues each accounting for half. The spectral data range used in the model from a full spectrum of 600-4000 cm−1. Then, the ensemble CNN model was used in the experiment. By using two convolution kernels, the model is able to extract nonlinear feature representations from different spectral regions. It has two advantages, on the one hand, it reduces the generation of noise, on the other hand, it obtains a stronger distinguishing ability. Finally, a feature vector is formed by the fusion layer, and is sent to the fully connected layer for the TSCC classification task. The results showed that the sensitivity and specificity of the model were 99.2% and 99.2%, respectively. In addition, comparison with existing methods shows that our method achieves the highest accuracy of TSCC classification. By comparing the different channels, the results show that the spectral range of 1380-2250cm−1 data has the greatest impact on the results. Therefore, Raman spectroscopy combined with the ensemble CNN model has great potential and can provide a useful technique for intraoperative evaluation of the margins of oral tongue squamous cell carcinoma.

[1]  T. B. Bakker Schut,et al.  Resection margins in oral cancer surgery: Room for improvement , 2016, Head & neck.

[2]  Nathan D. Shemonski,et al.  Real-time Imaging of the Resection Bed Using a Handheld Probe to Reduce Incidence of Microscopic Positive Margins in Cancer Surgery. , 2015, Cancer research.

[3]  Lior Rokach,et al.  Ensemble-based classifiers , 2010, Artificial Intelligence Review.

[4]  H. Barr,et al.  Advances in the clinical application of Raman spectroscopy for cancer diagnostics. , 2013, Photodiagnosis and photodynamic therapy.

[5]  A. Jemal,et al.  Global cancer statistics , 2011, CA: a cancer journal for clinicians.

[6]  Atul Deshmukh,et al.  In vivo Raman spectroscopic identification of premalignant lesions in oral buccal mucosa , 2012, Journal of biomedical optics.

[7]  Abhijit Datta,et al.  Autofluorescence imaging. , 2008, Ophthalmology.

[8]  P. Chaturvedi,et al.  In vivo Raman spectroscopy of oral buccal mucosa: a study on malignancy associated changes (MAC)/cancer field effects (CFE). , 2013, The Analyst.

[9]  A. Jemal,et al.  Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries , 2018, CA: a cancer journal for clinicians.

[10]  D. Godden,et al.  Do frozen sections help achieve adequate surgical margins in the resection of oral carcinoma? , 2003, International journal of oral and maxillofacial surgery.

[11]  P. Eilers,et al.  Sign constraints improve the detection of differences between complex spectral data sets: LC-IR as an example. , 2005, Analytical chemistry.

[12]  Aaron Park,et al.  Baseline correction using asymmetrically reweighted penalized least squares smoothing. , 2015, The Analyst.

[13]  Yan Wang,et al.  Comparison of autofluorescence imaging bronchoscopy and white light bronchoscopy for detection of lung cancers and precancerous lesions , 2013, Patient preference and adherence.

[14]  Giacomo Capizzi,et al.  A novel training method to preserve generalization of RBPNN classifiers applied to ECG signals diagnosis , 2018, Neural Networks.

[15]  T. B. Bakker Schut,et al.  Discrimination between oral cancer and healthy tissue based on water content determined by Raman spectroscopy. , 2015, Analytical chemistry.

[16]  G. Puppels,et al.  Towards oncological application of Raman spectroscopy , 2009, Journal of biophotonics.

[17]  Ke Gu,et al.  A self-organizing RBF neural network based on distance concentration immune algorithm , 2020, IEEE/CAA Journal of Automatica Sinica.

[18]  Volker Seifert,et al.  Intraoperative MRI guidance and extent of resection in glioma surgery: a randomised, controlled trial. , 2011, The Lancet. Oncology.

[19]  H. Zeng,et al.  Parameters defining the potential applicability of Raman spectroscopy as a diagnostic tool for oral disease. , 2009, Journal of biomedical optics.

[20]  Jian Sun,et al.  Delving Deep into Rectifiers: Surpassing Human-Level Performance on ImageNet Classification , 2015, 2015 IEEE International Conference on Computer Vision (ICCV).

[21]  Tao Zhang,et al.  Deep convolutional neural networks for tongue squamous cell carcinoma classification using Raman spectroscopy. , 2019, Photodiagnosis and photodynamic therapy.

[22]  C. Krishna,et al.  Optical pathology of oral tissue: A raman spectroscopy diagnostic method , 2001 .

[23]  R. Polikar,et al.  Ensemble based systems in decision making , 2006, IEEE Circuits and Systems Magazine.

[24]  P. Chaturvedi,et al.  Raman spectroscopy of normal oral buccal mucosa tissues: study on intact and incised biopsies. , 2011, Journal of biomedical optics.

[25]  Tao Zhang,et al.  Tongue squamous cell carcinoma discrimination with Raman spectroscopy and convolutional neural networks , 2019, Vibrational Spectroscopy.

[26]  C. Kerawala,et al.  Relocating the site of frozen sections—Is there room for improvement? , 2001, Head & neck.

[27]  H. Byrne,et al.  Raman spectroscopic analysis of oral cells in the high wavenumber region. , 2017, Experimental and molecular pathology.

[28]  F. Parker Applications of Infrared, Raman, and Resonance Raman Spectroscopy in Biochemistry , 1983 .

[29]  H. Barr,et al.  Medical applications of Raman spectroscopy: from proof of principle to clinical implementation. , 2002, Biopolymers.

[30]  L. Dinardo,et al.  Accuracy, Utility, and Cost of Frozen Section Margins in Head and Neck Cancer Surgery , 2000, The Laryngoscope.

[31]  Atul Deshmukh,et al.  In vivo Raman spectroscopy for oral cancers diagnosis , 2012, Other Conferences.

[32]  D. Opitz,et al.  Popular Ensemble Methods: An Empirical Study , 1999, J. Artif. Intell. Res..

[33]  A. Savitzky,et al.  Smoothing and Differentiation of Data by Simplified Least Squares Procedures. , 1964 .

[34]  V. B. Kartha,et al.  Micro-Raman Spectroscopy for Optical Pathology of Oral Squamous Cell Carcinoma , 2004, Applied spectroscopy.

[35]  Mads S. Bergholt,et al.  Characterizing variability in in vivo Raman spectroscopic properties of different anatomical sites of normal tissue in the oral cavity , 2012 .

[36]  H. Abramczyk,et al.  The cellular environment of cancerous human tissue. Interfacial and dangling water as a "hydration fingerprint". , 2014, Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy.

[37]  Marcin Wozniak,et al.  Lung segmentation on x-ray images with neural validation , 2017, 2017 IEEE Symposium Series on Computational Intelligence (SSCI).

[38]  Hélène Duplan,et al.  Effects of atmospheric relative humidity on Stratum Corneum structure at the molecular level: ex vivo Raman spectroscopy analysis. , 2013, The Analyst.

[39]  J. Woolgar,et al.  A histopathological appraisal of surgical margins in oral and oropharyngeal cancer resection specimens. , 2005, Oral oncology.

[40]  Fei-Yue Wang,et al.  Accurate and robust eye center localization via fully convolutional networks , 2019, IEEE/CAA Journal of Automatica Sinica.

[41]  T. B. Bakker Schut,et al.  Raman spectroscopy for cancer detection and cancer surgery guidance: translation to the clinics. , 2017, The Analyst.

[42]  Marcin Wozniak,et al.  Bacteria shape classification by the use of region covariance and Convolutional Neural Network , 2019, 2019 International Joint Conference on Neural Networks (IJCNN).

[43]  P. Chaturvedi,et al.  In vivo Raman spectroscopy for detection of oral neoplasia: A pilot clinical study , 2014, Journal of biophotonics.

[44]  Tuan D. Pham,et al.  Classification of short time series in early Parkinsonʼ s disease with deep learning of fuzzy recurrence plots , 2019, IEEE/CAA Journal of Automatica Sinica.

[45]  Ping Guo,et al.  A Low-Delay Lightweight Recurrent Neural Network (LLRNN) for Rotating Machinery Fault Diagnosis , 2019, Sensors.

[46]  Xiaoxia Song,et al.  Data gathering in wireless sensor networks via regular low density parity check matrix , 2018, IEEE/CAA Journal of Automatica Sinica.