Predictive Population Dynamics of Escherichia coli O157:H7 and Salmonella enterica on Plants: a Mechanistic Mathematical Model Based on Weather Parameters and Bacterial State

Fruits and vegetables are important sources of foodborne disease. Novel approaches to improve the microbial safety of produce are greatly lacking. ABSTRACT Weather affects key aspects of bacterial behavior on plants but has not been extensively investigated as a tool to assess risk of crop contamination with human foodborne pathogens. A novel mechanistic model informed by weather factors and bacterial state was developed to predict population dynamics on leafy vegetables and tested against published data tracking Escherichia coli O157:H7 (EcO157) and Salmonella enterica populations on lettuce and cilantro plants. The model utilizes temperature, radiation, and dew point depression to characterize pathogen growth and decay rates. Additionally, the model incorporates the population level effect of bacterial physiological state dynamics in the phyllosphere in terms of the duration and frequency of specific weather parameters. The model accurately predicted EcO157 and S. enterica population sizes on lettuce and cilantro leaves in the laboratory under various conditions of temperature, relative humidity, light intensity, and cycles of leaf wetness and dryness. Importantly, the model successfully predicted EcO157 population dynamics on 4-week-old romaine lettuce plants under variable weather conditions in nearly all field trials. Prediction of initial EcO157 population decay rates after inoculation of 6-week-old romaine plants in the same field study was better than that of long-term survival. This suggests that future augmentation of the model should consider plant age and species morphology by including additional physical parameters. Our results highlight the potential of a comprehensive weather-based model in predicting contamination risk in the field. Such a modeling approach would additionally be valuable for timing field sampling in quality control to ensure the microbial safety of produce. IMPORTANCE Fruits and vegetables are important sources of foodborne disease. Novel approaches to improve the microbial safety of produce are greatly lacking. Given that bacterial behavior on plant surfaces is highly dependent on weather factors, risk assessment informed by meteorological data may be an effective tool to integrate into strategies to prevent crop contamination. A mathematical model was developed to predict the population trends of pathogenic E. coli and S. enterica, two major causal agents of foodborne disease associated with produce, on leaves. Our model is based on weather parameters and rates of switching between the active (growing) and inactive (nongrowing) bacterial state resulting from prevailing environmental conditions on leaf surfaces. We demonstrate that the model has the ability to accurately predict dynamics of enteric pathogens on leaves and, notably, sizes of populations of pathogenic E. coli over time after inoculation onto the leaves of young lettuce plants in the field.

[1]  Susan R. Leonard,et al.  Weather factors, soil microbiome, and bacteria-fungi interactions as drivers of the epiphytic phyllosphere communities of romaine lettuce. , 2023, Food microbiology.

[2]  M. Wiedmann,et al.  Weather stressors correlate with Escherichia coli and Salmonella enterica persister formation rates in the phyllosphere: a mathematical modeling study , 2022, ISME Communications.

[3]  N. Kashtan,et al.  It’s the Economy, Stupid: Applying (Micro)economic Principles to Microbiome Science , 2022, mSystems.

[4]  Susan R. Leonard,et al.  Seasonality, shelf life and storage atmosphere are main drivers of the microbiome and E. coli O157:H7 colonization of post-harvest lettuce cultivated in a major production area in California , 2021, Environmental microbiome.

[5]  Irine Ronin,et al.  Observation of universal ageing dynamics in antibiotic persistence , 2021, Nature.

[6]  D. J. Kiviet,et al.  Wide lag time distributions break a trade-off between reproduction and survival in bacteria , 2020, Proceedings of the National Academy of Sciences.

[7]  M. Wiedmann,et al.  Effect of Weather on the Die-Off of Escherichia coli and Attenuated Salmonella enterica Serovar Typhimurium on Preharvest Leafy Greens following Irrigation with Contaminated Water , 2020, Applied and Environmental Microbiology.

[8]  M. Marco,et al.  Conditions at the time of inoculation influence survival of attenuated Escherichia coli O157:H7 on field-inoculated lettuce. , 2020, Food microbiology.

[9]  F. Kuchler,et al.  Shiga Toxin-Producing Escherichia coli (STEC) O157:H7 and Romaine Lettuce: Source Labeling, Prevention, and Business. , 2020, American journal of public health.

[10]  R. Ivanek,et al.  Formation of Escherichia coli O157:H7 Persister Cells in the Lettuce Phyllosphere and Application of Differential Equation Models To Predict Their Prevalence on Lettuce Plants in the Field , 2019, Applied and Environmental Microbiology.

[11]  N. Kashtan,et al.  Bacterial survival in microscopic surface wetness , 2019, eLife.

[12]  M. Hajmeer,et al.  Overview of Leafy Greens-Related Food Safety Incidents with a California Link: 1996 to 2016. , 2019, Journal of food protection.

[13]  T. Suslow,et al.  Evaluation of post-contamination survival and persistence of applied attenuated E. coli O157:H7 and naturally-contaminating E. coli O157:H7 on spinach under field conditions and following postharvest handling. , 2019, Food microbiology.

[14]  B. Alsanius,et al.  Season and Species: Two Possible Hurdles for Reducing the Food Safety Risk of Escherichia coli O157 Contamination of Leafy Vegetables. , 2019, Journal of food protection.

[15]  F. López-Gálvez,et al.  Impact of relative humidity, inoculum carrier and size, and native microbiota on Salmonella ser. Typhimurium survival in baby lettuce. , 2018, Food microbiology.

[16]  Christopher J. Sroka,et al.  Survival of Escherichia coli on Lettuce under Field Conditions Encountered in the Northeastern United States. , 2017, Journal of food protection.

[17]  Chii-Wann Lin,et al.  Current Perspectives on Viable but Non-culturable State in Foodborne Pathogens , 2017, Front. Microbiol..

[18]  M. Eisenberg,et al.  Modeling Biphasic Environmental Decay of Pathogens and Implications for Risk Analysis , 2017, Environmental science & technology.

[19]  Tracy Rowlandson,et al.  Reconsidering Leaf Wetness Duration Determination for Plant Disease Management. , 2015, Plant disease.

[20]  Ivan Simko,et al.  Downy mildew disease promotes the colonization of romaine lettuce by Escherichia coli O157:H7 and Salmonella enterica , 2015, BMC Microbiology.

[21]  S. George,et al.  Bacterial economics: adaptation to stress conditions via stage-wise changes in the response mechanism. , 2015, Food microbiology.

[22]  K. Wiegand,et al.  Spatial scales of interactions among bacteria and between bacteria and the leaf surface , 2014, FEMS microbiology ecology.

[23]  E. Topp,et al.  Evaluation of different approaches for modeling Escherichia coli O157:H7 survival on field lettuce. , 2014, International journal of food microbiology.

[24]  Yaguang Luo,et al.  Inheritance of Decay of Fresh-cut Lettuce in a Recombinant Inbred Line Population from ‘Salinas 88’ × ‘La Brillante’ , 2014 .

[25]  S. Huynh,et al.  Effect of the Surfactant Tween 80 on the Detachment and Dispersal of Salmonella enterica Serovar Thompson Single Cells and Aggregates from Cilantro Leaves as Revealed by Image Analysis , 2014, Applied and Environmental Microbiology.

[26]  A. Geeraerd,et al.  Modeling the fate of Escherichia coli O157:H7 and Salmonella enterica in the agricultural environment: current perspective. , 2014, Journal of food science.

[27]  D. Korber,et al.  Escherichia coli O157: Insights into the adaptive stress physiology and the influence of stressors on epidemiology and ecology of this human pathogen , 2014, Critical reviews in microbiology.

[28]  S. Burleigh,et al.  Prevalence of Escherichia coli O157:H7 on spinach and rocket as affected by inoculum and time to harvest , 2014 .

[29]  T. Stenström,et al.  Modeling the die-off of E. coli and Ascaris in wastewater-irrigated vegetables: implications for microbial health risk reduction associated with irrigation cessation. , 2013, Water science and technology : a journal of the International Association on Water Pollution Research.

[30]  M. Marco,et al.  Assessments of Total and Viable Escherichia coli O157:H7 on Field and Laboratory Grown Lettuce , 2013, PloS one.

[31]  M. Marco,et al.  Season, Irrigation, Leaf Age, and Escherichia coli Inoculation Influence the Bacterial Diversity in the Lettuce Phyllosphere , 2013, PloS one.

[32]  N. Hofstra,et al.  Impacts of climate change on the microbial safety of pre-harvest leafy green vegetables as indicated by Escherichia coli O157 and Salmonella spp. , 2013, International journal of food microbiology.

[33]  J. Leveau,et al.  Leaf microbiota in an agroecosystem: spatiotemporal variation in bacterial community composition on field-grown lettuce , 2012, The ISME Journal.

[34]  M. Gilmour,et al.  Comparative examination of Escherichia coli O157:H7 survival on romaine lettuce and in soil at two independent experimental sites. , 2012, Journal of food protection.

[35]  Roland Lindqvist,et al.  Quantitative microbial risk assessment for Escherichia coli O157 on lettuce, based on survival data from controlled studies in a climate chamber. , 2011, Journal of food protection.

[36]  M. Cahn,et al.  Fate of Escherichia coli O157:H7 in field-inoculated lettuce. , 2011, Food microbiology.

[37]  S. Bach,et al.  Induction of Viable but Nonculturable Escherichia coli O157:H7 in the Phyllosphere of Lettuce: a Food Safety Risk Factor , 2011, Applied and Environmental Microbiology.

[38]  J. Baranyi,et al.  Lag Phase of Salmonella enterica under Osmotic Stress Conditions , 2010, Applied and Environmental Microbiology.

[39]  S. Phatak,et al.  Surface and internalized Escherichia coli O157:H7 on field-grown spinach and lettuce treated with spray-contaminated irrigation water. , 2010, Journal of food protection.

[40]  J. Leveau,et al.  Linking environmental heterogeneity and reproductive success at single-cell resolution , 2010, The ISME Journal.

[41]  M. Brandl,et al.  Leaf Age as a Risk Factor in Contamination of Lettuce with Escherichia coli O157:H7 and Salmonella enterica , 2008, Applied and Environmental Microbiology.

[42]  C. Nguyen-the,et al.  Viable but non‐culturable Listeria monocytogenes on parsley leaves and absence of recovery to a culturable state , 2007, Journal of applied microbiology.

[43]  M. Drake,et al.  Stress Response of Escherichia coli , 2006 .

[44]  Andreas Wagner,et al.  Faculty Opinions recommendation of Bacterial persistence: a model of survival in changing environments. , 2005 .

[45]  S. Leibler,et al.  Bacterial Persistence , 2005, Genetics.

[46]  Tom Humphrey,et al.  Salmonella, stress responses and food safety , 2004, Nature Reviews Microbiology.

[47]  T. Gillespie,et al.  Electronic leaf wetness duration sensor: why it should be painted , 2004, International journal of biometeorology.

[48]  R. Mandrell,et al.  Fitness of Salmonella enterica serovar Thompson in the Cilantro Phyllosphere , 2002, Applied and Environmental Microbiology.

[49]  G. Sundin,et al.  Effect of Solar UV-B Radiation on a Phyllosphere Bacterial Community , 2001, Applied and Environmental Microbiology.

[50]  S. S. Hirano,et al.  Bacteria in the Leaf Ecosystem with Emphasis onPseudomonas syringae—a Pathogen, Ice Nucleus, and Epiphyte , 2000, Microbiology and Molecular Biology Reviews.

[51]  James C. Paton,et al.  Pathogenesis and Diagnosis of Shiga Toxin-Producing Escherichia coli Infections , 1998, Clinical Microbiology Reviews.

[52]  B. P. Hills,et al.  Multi-compartment kinetic models for injury, resuscitation, induced lag and growth in bacterial cell populations , 1995 .

[53]  S. Lindow,et al.  Inoculum Density-Dependent Mortality and Colonization of the Phyllosphere by Pseudomonas syringae , 1994, Applied and environmental microbiology.

[54]  J Olley,et al.  Relationship between temperature and growth rate of bacterial cultures , 1982, Journal of bacteriology.

[55]  A. Parikh,et al.  Topography-Driven Shape, Spread, and Retention of Leaf Surface Water Impacts Microbial Dispersion and Activity in the Phyllosphere , 2020 .

[56]  M. Bailey,et al.  Human pathogens and the health threat of the phyllosphere. , 2006 .