Improvement in recombinant protein production in ppGpp-deficient Escherichia coli.

Maintaining a metabolically productive state for recombinant Escherichia coli remains a central problem for a wide variety of growth-dependent biosynthesis. This problem becomes particularly acute under conditions of minimal cell growth such as fed-batch fermentations. In this, we investigated the possibility of manipulating the protein synthesis machinery of E. coli whereby synthesis of foreign proteins might be decoupled from cell growth. In particular, the effects of eliminating intracellular ppGpp on the synthesis of foreign proteins were studied in both batch and fed-batch operations. A significant increase in CAT production was observed from the ppGpp-deficient strain during both exponential and fed-batch phases. The increase in CAT production during exponential growth was accompanied by a simultaneous increase in CAT mRNA levels. Interestingly, CAT production was increased five-fold, while the level of CAT-specific mRNA increased only three-fold. Thus, eliminating intracellular ppGpp appears to have increase the production of recombinant protein by increasing not only the pool sizes of CAT mRNA but also possible alternations in the post-transcriptional processes. (c) 1997 John Wiley & Sons, Inc. Biotechnol Bioeng 53: 379-386, 1997.

[1]  J. Bailey,et al.  Process Characterization of a Novel Cross‐Regulation System for Cloned Protein Production in Escherichia coli , 1995, Biotechnology progress.

[2]  F. Neidhardt,et al.  Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology , 1987 .

[3]  A. Matin The molecular basis of carbon‐starvation‐induced general resistance in Escherichia coli , 1991, Molecular microbiology.

[4]  J. Zyskind,et al.  Guanosine tetraphosphate inhibits protein synthesis in vivo. A possible protective mechanism for starvation stress in Escherichia coli. , 1993, The Journal of biological chemistry.

[5]  J. Gallant,et al.  Two Compounds implicated in the Function of the RC Gene of Escherichia coli , 1969, Nature.

[6]  P. Dennis,et al.  Regulation of ribonucleic acid synthesis in Escherichia coli B-r: an analysis of a shift-up. 1. Ribosomal RNA chain growth rates. , 1973, Journal of molecular biology.

[7]  J. Bailey,et al.  Construction and characterization of a novel cross-regulation system for regulating cloned gene expression in Escherichia coli. , 1993, Gene.

[8]  C. A. Thomas,et al.  Molecular cloning. , 1977, Advances in pathobiology.

[9]  P. Sarmientos,et al.  Functional interrelationship between two tandem E. coli ribosomal RNA promoters , 1983, Nature.

[10]  G. Bennett,et al.  Strategies in High‐Level Expression of Recombinant Protein in Escherichia coli , 1994, Annals of the New York Academy of Sciences.

[11]  U. K. Laemmli,et al.  Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 , 1970, Nature.

[12]  H. Bremer,et al.  Toxic effects of high levels of ppGpp in Escherichia coli are relieved by rpoB mutations. , 1992, The Journal of biological chemistry.

[13]  W. Bentley,et al.  Response dynamics of 26‐, 34‐, 39‐, 54‐, and 80‐kDa proteases in induced cultures of recombinant Escherichia coli , 1993, Biotechnology and Bioengineering.

[14]  A. L. Koch,et al.  Effect of growth rate on the relative rates of synthesis of messenger, ribosomal and transfer RNA in Escherichia coli. , 1972, Journal of molecular biology.

[15]  H. Bremer,et al.  Control of rRNA and tRNA syntheses in Escherichia coli by guanosine tetraphosphate , 1982, Journal of bacteriology.

[16]  H. Bremer,et al.  Characterization of RNA and DNA synthesis in Escherichia coli strains devoid of ppGpp. , 1993, The Journal of biological chemistry.

[17]  W. Haseltine,et al.  In Vitro Synthesis of ppGpp and pppGpp , 1974 .

[18]  R. Rodriguez,et al.  Recombinant DNA Techniques: An Introduction , 1983 .

[19]  A. Lamond,et al.  PpGpp regulates the binding of two RNA polymerase molecules to the tyrT promoter. , 1982, Nucleic acids research.

[20]  R. Gourse,et al.  Feedback regulation of rRNA and tRNA synthesis and accumulation of free ribosomes after conditional expression of rRNA genes. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[21]  P. Blum,et al.  Genetic basis of starvation survival in nondifferentiating bacteria. , 1989, Annual review of microbiology.

[22]  M. Cashel,et al.  Mutational analysis of the Escherichia coli spoT gene identifies distinct but overlapping regions involved in ppGpp synthesis and degradation , 1996, Molecular microbiology.

[23]  H. Bremer Modulation of Chemical Composition and Other Parameters of the Cell by Growth Rate , 1999 .

[24]  Teri,et al.  Molecular Cloning A Laboratory Manual Second Edition Sambrook , 1989 .

[25]  G W Luli,et al.  Comparison of growth, acetate production, and acetate inhibition of Escherichia coli strains in batch and fed-batch fermentations , 1990, Applied and environmental microbiology.

[26]  T. Nystöm Role of guanosine tetraphosphate in gene expression and the survival of glucose or seryl-tRNA starved cells of Escherichia coli K12. , 1994, Molecular & general genetics : MGG.

[27]  T. Hall,et al.  Analysis of RNA replication in plant viruses , 1994 .

[28]  M. Cashel,et al.  The stringent response , 1996 .

[29]  H. Xiao,et al.  Residual guanosine 3',5'-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations. , 1991, The Journal of biological chemistry.

[30]  A. Herman,et al.  Effect of increased ppGpp concentration on DNA replication of different replicons in Escherichia coli , 1995, Journal of basic microbiology.

[31]  J. Hamming,et al.  E coli RNA polymerase-rRNA promoter interaction and the effect of ppGpp. , 1980, Nucleic acids research.

[32]  H. Bremer,et al.  Escherichia coli ppGpp synthetase II activity requires spoT. , 1991, The Journal of biological chemistry.

[33]  K. Jensen,et al.  High concentrations of ppGpp decrease the RNA chain growth rate. Implications for protein synthesis and translational fidelity during amino acid starvation in Escherichia coli. , 1994, Journal of molecular biology.

[34]  M. Chamberlin,et al.  Pausing and attenuation of in vitro transcription in the rrnB operon of E. coli , 1981, Cell.