The genome of the cucumber, Cucumis sativus L.

[1]  Lihuang Zhu,et al.  Molecular Isolation of the M Gene Suggests That a Conserved-Residue Conversion Induces the Formation of Bisexual Flowers in Cucumber Plants , 2009, Genetics.

[2]  W. Jin,et al.  An Integrated Genetic and Cytogenetic Map of the Cucumber Genome , 2009, PloS one.

[3]  Brett S Phinney,et al.  Analysis of the Pumpkin Phloem Proteome Provides Insights into Angiosperm Sieve Tube Function*S , 2009, Molecular & Cellular Proteomics.

[4]  S. Renner,et al.  Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events , 2009, Proceedings of the Royal Society B: Biological Sciences.

[5]  Dawei Li,et al.  The diploid genome sequence of an Asian individual , 2008, Nature.

[6]  Nancy F. Hansen,et al.  Accurate Whole Human Genome Sequencing using Reversible Terminator Chemistry , 2008, Nature.

[7]  W. Jin,et al.  Distribution of the tandem repeat sequences and karyotyping in cucumber (Cucumis sativus L.) by fluorescence in situ hybridization , 2008, Cytogenetic and Genome Research.

[8]  P. Arús,et al.  Bin mapping of genomic and EST-derived SSRs in melon (Cucumis melo L.) , 2008, Theoretical and Applied Genetics.

[9]  A. V. van Bel,et al.  GFP Tagging of Sieve Element Occlusion (SEO) Proteins Results in Green Fluorescent Forisomes , 2008, Plant & cell physiology.

[10]  M. Purugganan,et al.  A Conserved Mutation in an Ethylene Biosynthesis Enzyme Leads to Andromonoecy in Melons , 2008, Science.

[11]  W. Schwab,et al.  Biosynthesis of plant-derived flavor compounds. , 2008, The Plant journal : for cell and molecular biology.

[12]  S. Yanagisawa,et al.  Nano scale proteomics revealed the presence of regulatory proteins including three FT-Like proteins in phloem and xylem saps from rice. , 2008, Plant & cell physiology.

[13]  A. Osbourn,et al.  Metabolic Diversification—Independent Assembly of Operon-Like Gene Clusters in Different Plants , 2008, Science.

[14]  Stephen M. Mount,et al.  The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) , 2008, Nature.

[15]  J. Bennetzen,et al.  The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants , 2008, Science.

[16]  J. Poulain,et al.  The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla , 2007, Nature.

[17]  L. Davin,et al.  Expression of cinnamyl alcohol dehydrogenases and their putative homologues during Arabidopsis thaliana growth and development: lessons for database annotations? , 2007, Phytochemistry.

[18]  Zhao Xu,et al.  LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons , 2007, Nucleic Acids Res..

[19]  Wei Zhu,et al.  The TIGR Plant Transcript Assemblies database , 2006, Nucleic Acids Res..

[20]  E. D. Earle,et al.  Nuclear DNA content of some important plant species , 1991, Plant Molecular Biology Reporter.

[21]  G. Weinstock,et al.  Creating a honey bee consensus gene set , 2007, Genome Biology.

[22]  Stephen M. Mount,et al.  Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis , 2006, BMC Genomics.

[23]  A. Monfort,et al.  An eIF4E allele confers resistance to an uncapped and non-polyadenylated RNA virus in melon. , 2006, The Plant journal : for cell and molecular biology.

[24]  M. Gribskov,et al.  The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray) , 2006, Science.

[25]  B. Bartel,et al.  Biosynthetic diversity in plant triterpene cyclization. , 2006, Current opinion in plant biology.

[26]  W. J. Lucas,et al.  Integrative plant biology: role of phloem long-distance macromolecular trafficking. , 2006, Annual review of plant biology.

[27]  Ivo Feussner,et al.  Lipoxygenases: occurrence, functions and catalysis. , 2006, Journal of plant physiology.

[28]  P. Giavalisco,et al.  Towards the proteome of Brassica napus phloem sap , 2006, Proteomics.

[29]  Tao Liu,et al.  TreeFam: a curated database of phylogenetic trees of animal gene families , 2005, Nucleic Acids Res..

[30]  Jian Wang,et al.  ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun , 2005, PLoS Comput. Biol..

[31]  Takuji Sasaki,et al.  The map-based sequence of the rice genome , 2005, Nature.

[32]  李佩芳.  International Rice Genome Sequencing Project. 2005. The map-based sequence of the rice genome. , 2005 .

[33]  Lei Gao,et al.  Test Data Sets and Evaluation of Gene Prediction Programs on the Rice Genome , 2005, Journal of Computer Science and Technology.

[34]  Dawei Li,et al.  The Genomes of Oryza sativa: A History of Duplications , 2005, PLoS biology.

[35]  Sean R. Eddy,et al.  Rfam: annotating non-coding RNAs in complete genomes , 2004, Nucleic Acids Res..

[36]  Janet Braam,et al.  In touch: plant responses to mechanical stimuli. , 2004, The New phytologist.

[37]  E. Galun.  The cucumber tendril — a new test organ for gibberellic acid , 1959, Experientia.

[38]  H. Kishino,et al.  Dating of the human-ape splitting by a molecular clock of mitochondrial DNA , 2005, Journal of Molecular Evolution.

[39]  Eugene W. Myers,et al.  PILER: identification and classification of genomic repeats , 2005, ISMB.

[40]  Pavel A. Pevzner,et al.  De novo identification of repeat families in large genomes , 2005, ISMB.

[41]  J. Alonso,et al.  The Ethylene Signaling Pathway , 2004, Science.

[42]  Steven Salzberg,et al.  TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders , 2004, Bioinform..

[43]  M. Gandolfo,et al.  Fossil evidence and phylogeny: the age of major angiosperm clades based on mesofossil and macrofossil evidence from Cretaceous deposits. , 2004, American journal of botany.

[44]  Y. Ebizuka,et al.  Cucurbitadienol synthase, the first committed enzyme for cucurbitacin biosynthesis, is a distinct enzyme from cycloartenol synthase for phytosterol biosynthesis , 2004 .

[45]  M. Tanurdžić,et al.  Sex-Determining Mechanisms in Land Plants , 2004, The Plant Cell Online.

[46]  Ian Korf,et al.  Gene finding in novel genomes , 2004, BMC Bioinformatics.

[47]  R. Buescher,et al.  Inactivation of pathogenic bacteria by cucumber volatiles (E,Z)-2,6-nonadienal and (E)-2-nonenal. , 2004, Journal of food protection.

[48]  J. Shendure,et al.  Advanced sequencing technologies: methods and goals , 2004, Nature Reviews Genetics.

[49]  R. Durbin,et al.  GeneWise and Genomewise. , 2004, Genome research.

[50]  Robert C. Edgar,et al.  MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.

[51]  S. Smeekens.  Faculty Opinions recommendation of Plant eR genes that encode photorespiratory enzymes confer resistance against disease. , 2004 .

[52]  J. Staub,et al.  Genetic diversity in cucumber (Cucumis sativus L.): IV. An evaluation of Chinese germplasm1 , 1999, Genetic Resources and Crop Evolution.

[53]  R. Grumet,et al.  Inheritance of resistance to watermelon mosaic virus in the cucumber line TMG-1: tissue-specific expression and relationship to zucchini yellow mosaic virus resistance , 1995, Theoretical and Applied Genetics.

[54]  H. Bouwmeester,et al.  Role of Cucurbitacin C in Resistance to Spider Mite (Tetranychus urticae) in Cucumber (Cucumis sativus L.) , 2004, Journal of Chemical Ecology.

[55]  S. Salzberg,et al.  Versatile and open software for comparing large genomes , 2004, Genome Biology.

[56]  W. Haddon,et al.  Biochemical Diversity among the 1-Amino-cyclopropane-1-Carboxylate Synthase Isozymes Encoded by the Arabidopsis Gene Family* , 2003, Journal of Biological Chemistry.

[57]  Mario Stanke,et al.  Gene prediction with a hidden Markov model and a new intron submodel , 2003, ECCB.

[58]  G. Thompson,et al.  Diversity of the Superfamily of Phloem Lectins (Phloem Protein 2) in Angiosperms1 , 2003, Plant Physiology.

[59]  Huanming Yang,et al.  RePS: a sequence assembler that masks exact repeats identified from the shotgun data. , 2002, Genome research.

[60]  M. Thomas,et al.  Association of dwarfism and floral induction with a grape ‘green revolution’ mutation , 2002, Nature.

[61]  Huanming Yang,et al.  A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) , 2002, Science.

[62]  A. Oliphant,et al.  A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). , 2002, Science.

[63]  Mark W. Chase,et al.  Evolution of the angiosperms: calibrating the family tree , 2001, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[64]  R. Buescher,et al.  Production and Stability of (E, Z)‐2, 6‐Nonadienal, the Major Flavor Volatile of Cucumbers , 2001 .

[65]  The Arabidopsis Genome Initiative.  Analysis of the genome sequence of the flowering plant Arabidopsis thaliana , 2000, Nature.

[66]  Daniel J. Cosgrove,et al.  Loosening of plant cell walls by expansins , 2000, Nature.

[67]  I. Feussner,et al.  Fatty acid 9‐ and 13‐hydroperoxide lyases from cucumber1 , 2000, FEBS letters.

[68]  V. Solovyev,et al.  Ab initio gene finding in Drosophila genomic DNA. , 2000, Genome research.

[69]  M. Pirrung.  Ethylene Biosynthesis from 1‐Aminocyclopropanecarboxylic Acid , 1999 .

[70]  S. Eddy,et al.  A computational screen for methylation guide snoRNAs in yeast. , 1999, Science.

[71]  W. J. Lucas,et al.  Plant paralog to viral movement protein that potentiates transport of mRNA into the phloem. , 1999, Science.

[72]  M. Adams,et al.  A tool for analyzing and annotating genomic sequences. , 1997, Genomics.

[73]  T. Lange.  Cloning gibberellin dioxygenase genes from pumpkin endosperm by heterologous expression of enzyme activities in Escherichia coli. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[74]  S. Eddy,et al.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. , 1997, Nucleic acids research.

[75]  S. Dellaporta,et al.  Sex determination gene TASSELSEED2 of maize encodes a short-chain alcohol dehydrogenase required for stage-specific floral organ abortion. , 1993, Cell.

[76]  M. Jaffe,et al.  Further studies of auxin and ACC induced feminization in the cucumber plant using ethylene inhibitors. , 1984, Phyton.

[77]  J. Rudich,et al.  Ethylene evolution from cucumber plants as related to sex expression. , 1972, Plant physiology.

[78]  C. M. Jones,et al.  Cucumber Beetle Resistance and Mite Susceptibility Controlled by the Bitter Gene in Cucumis sativus L , 1971, Science.

[79]  C. Darwin.  The Movements and Habits of Climbing Plants , 1875, Nature.

[80]  Yasuko Takahashi,et al.  Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events , 2022 .