Genomic Selection Accuracy using Multifamily Prediction Models in a Wheat Breeding Program
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[1] J. A. Hartigan,et al. A k-means clustering algorithm , 1979 .
[2] L. Totir,et al. Mixed model approaches for the identification of QTLs within a maize hybrid breeding program , 2009, Theoretical and Applied Genetics.
[3] M P L Calus,et al. Genomic breeding value prediction: methods and procedures. , 2010, Animal : an international journal of animal bioscience.
[4] Robenzon E. Lorenzana,et al. Accuracy of genotypic value predictions for marker-based selection in biparental plant populations , 2009, Theoretical and Applied Genetics.
[5] P. VanRaden. Invited review: selection on net merit to improve lifetime profit. , 2004, Journal of dairy science.
[6] J. Beckmann,et al. Trait-based analyses for the detection of linkage between marker loci and quantitative trait loci in crosses between inbred lines , 1987, Theoretical and Applied Genetics.
[7] R. Reiter,et al. Molecular Markers in a Commercial Breeding Program , 2007 .
[8] R. Bernardo. Molecular Markers and Selection for Complex Traits in Plants: Learning from the Last 20 Years , 2008 .
[9] J. Sved. Linkage disequilibrium and homozygosity of chromosome segments in finite populations. , 1971, Theoretical population biology.
[10] C. Sneller,et al. Nonstarch polysaccharides in wheat flour wire-cut cookie making. , 2008, Journal of agricultural and food chemistry.
[11] R. Bernardo,et al. Genomewide selection in oil palm: increasing selection gain per unit time and cost with small populations , 2008, Theoretical and Applied Genetics.
[12] R. Jansen,et al. Using complex plant pedigrees to map valuable genes. , 2001, Trends in plant science.
[13] C. Y. Lin. Index selection for genetic improvement of quantitative characters , 1978, Theoretical and Applied Genetics.
[14] B. Guldbrandtsen,et al. Preliminary investigation on reliability of genomic estimated breeding values in the Danish Holstein population. , 2010, Journal of dairy science.
[15] R. Fernando,et al. The Impact of Genetic Relationship Information on Genome-Assisted Breeding Values , 2007, Genetics.
[16] W. Muir,et al. Comparison of genomic and traditional BLUP-estimated breeding value accuracy and selection response under alternative trait and genomic parameters. , 2007, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.
[17] D. L. Harris. EXPECTED AND PREDICTED PROGRESS FROM INDEX SELECTION INVOLVING ESTIMATES OF POPULATION PARAMETERS , 1964 .
[18] A. Melchinger,et al. Quantitative Trait Locus Mapping Based on Resampling in a Vast Maize Testcross Experiment and Its Relevance to Quantitative Genetics for Complex Traits , 2004, Genetics.
[19] J. Holland. Implementation of molecular markers for quantitative traits in breeding programs - challenges and opportunities , 2004 .
[20] Daniel Gianola,et al. Additive Genetic Variability and the Bayesian Alphabet , 2009, Genetics.
[21] Keyan Zhao,et al. An Arabidopsis Example of Association Mapping in Structured Samples , 2006, PLoS genetics.
[22] S. Knapp,et al. Using molecular markers to estimate quantitative trait locus parameters: power and genetic variances for unreplicated and replicated progeny. , 1990, Genetics.
[23] Jeffery A. Thompson,et al. Context-specific marker-assisted selection for improved grain yield in elite soybean populations. , 2010 .
[24] Shizhong Xu,et al. Theoretical basis of the Beavis effect. , 2003, Genetics.
[25] M. Sorrells,et al. Mapping quantitative trait loci for preharvest sprouting resistance in white wheat , 2009, Theoretical and Applied Genetics.
[26] P. Visscher,et al. Increased accuracy of artificial selection by using the realized relationship matrix. , 2009, Genetics research.
[27] Andrew H. Paterson,et al. Molecular Dissection of Complex Traits , 1997 .
[28] Jonathan H. Crouch,et al. Marker-Assisted Selection in Plant Breeding: From Publications to Practice , 2008 .
[29] Dean W. Podlich,et al. Mapping As You Go , 2004 .
[30] H. W. Johnson,et al. Multiple Selection Criteria in Soybeans1 , 1959 .
[31] H. Piepho. Ridge Regression and Extensions for Genomewide Selection in Maize , 2009 .
[32] Bjarni V. Halldórsson,et al. Many sequence variants affecting diversity of adult human height , 2008, Nature Genetics.
[33] D. Heckerman,et al. Efficient Control of Population Structure in Model Organism Association Mapping , 2008, Genetics.
[34] J C Whittaker,et al. Marker-assisted selection using ridge regression. , 2000, Genetical research.
[35] José Crossa,et al. Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers , 2010, Genetics.
[36] T. Meuwissen,et al. Accuracy of breeding values of 'unrelated' individuals predicted by dense SNP genotyping , 2009, Genetics Selection Evolution.
[37] M. Sorrells,et al. Genomic Selection for Crop Improvement , 2009 .
[38] An application of the discriminant function for selection in poultry , 1946, Journal of Genetics.
[39] Walter T. Federer,et al. Augmented (or Hoonuiaku) Designs , 1956 .
[40] Adrian E. Raftery,et al. MCLUST Version 3 for R: Normal Mixture Modeling and Model-Based Clustering † , 2007 .
[41] J. S. Williams. THE EVALUATION OF A SELECTION INDEX1 , 1962 .
[42] M. Sorrells,et al. Plant Breeding with Genomic Selection: Gain per Unit Time and Cost , 2010 .
[43] P. Visscher,et al. Common SNPs explain a large proportion of heritability for human height , 2011 .
[44] Robin Thompson,et al. ASREML user guide release 1.0 , 2002 .
[45] C. R. Henderson. Applications of linear models in animal breeding , 1984 .
[46] H. Piepho,et al. Comparison of Weighting in Two‐Stage Analysis of Plant Breeding Trials , 2009 .
[47] M. Goddard,et al. Invited review: Genomic selection in dairy cattle: progress and challenges. , 2009, Journal of dairy science.
[48] M. Goddard. Genomic selection: prediction of accuracy and maximisation of long term response , 2009, Genetica.
[49] F. Hospital,et al. Marker-assisted selection efficiency in populations of finite size. , 1998, Genetics.
[50] H. F. Smith,et al. A DISCRIMINANT FUNCTION FOR PLANT SELECTION , 1936 .
[51] P. VanRaden,et al. Invited review: reliability of genomic predictions for North American Holstein bulls. , 2009, Journal of dairy science.
[52] L R Schaeffer,et al. Strategy for applying genome-wide selection in dairy cattle. , 2006, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.
[53] A. Rafalski. Applications of single nucleotide polymorphisms in crop genetics. , 2002, Current opinion in plant biology.
[54] R. Bernardo,et al. Prospects for genomewide selection for quantitative traits in maize , 2007 .
[55] Ben J Hayes,et al. Accuracy of genomic breeding values in multi-breed dairy cattle populations , 2009, Genetics Selection Evolution.
[56] Bruce Tier,et al. A comparison of five methods to predict genomic breeding values of dairy bulls from genome-wide SNP markers , 2009, Genetics Selection Evolution.
[57] W. Beavis. QTL Analyses: Power, Precision, and Accuracy , 1997, Molecular Dissection of Complex Traits.
[58] M. Goddard,et al. Genomic selection. , 2007, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.
[59] J. Jannink. Dynamics of long-term genomic selection , 2010, Genetics Selection Evolution.
[60] J. Dekkers,et al. Prediction of response to marker-assisted and genomic selection using selection index theory. , 2007, Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie.
[61] Jean-Luc Jannink,et al. Genomic selection in plant breeding: from theory to practice. , 2010, Briefings in functional genomics.
[62] M. Goddard,et al. Prediction of total genetic value using genome-wide dense marker maps. , 2001, Genetics.
[63] Mark E. Sorrells,et al. RFLP Analysis of Genomic Regions Associated with Resistance to Preharvest Sprouting in Wheat , 1993 .
[64] F. Hospital,et al. More on the efficiency of marker-assisted selection , 1997, Theoretical and Applied Genetics.
[65] Peter M Visscher,et al. Sizing up human height variation , 2008, Nature Genetics.
[66] R. Lande,et al. Efficiency of marker-assisted selection in the improvement of quantitative traits. , 1990, Genetics.
[67] L. N. Hazel. The Genetic Basis for Constructing Selection Indexes. , 1943, Genetics.
[68] M. Sorrells,et al. Association Analysis as a Strategy for Improvement of Quantitative Traits in Plants , 2006 .
[69] Michael E Goddard,et al. Sensitivity of genomic selection to using different prior distributions , 2010, BMC proceedings.
[70] Aaron J. Lorenz,et al. Genomic Selection in Plant Breeding , 2011 .
[71] Adrian E. Raftery,et al. Model-Based Clustering, Discriminant Analysis, and Density Estimation , 2002 .
[72] J. Woolliams,et al. The Impact of Genetic Architecture on Genome-Wide Evaluation Methods , 2010, Genetics.
[73] Jean-Luc Jannink,et al. Factors Affecting Accuracy From Genomic Selection in Populations Derived From Multiple Inbred Lines: A Barley Case Study , 2009, Genetics.
[74] C. Gieger,et al. Identification of ten loci associated with height highlights new biological pathways in human growth , 2008, Nature Genetics.
[75] David M. Evans,et al. Genome-wide association analysis identifies 20 loci that influence adult height , 2008, Nature Genetics.
[76] J. Woolliams,et al. The Accuracy of Genomic Selection in Norwegian Red Cattle Assessed by Cross-Validation , 2009, Genetics.