The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins

The regulation of gene expression depends critically upon chromatin structure. Transcription of protein-coding genes can be reconstituted on naked DNA with only the general transcription factors and RNA polymerase II (ref. 2). This minimal system cannot transcribe DNA packaged into chromatin, indicating thataccessory factors may facilitate access to DNA. Two classes of accessory factor, ATP-dependent chromatin-remodelling enzymes and histone acetyltransferases, facilitate transcription initiation from chromatin templates. FACT (for facilitates chromatin transcription) is a chromatin-specific elongation factor required for transcription of chromatin templates in vitro,. Here we show that FACT comprises a new human homologue of the Saccharomyces cerevisiae Spt16/Cdc68 protein and the high-mobility group-1-like protein structure-specific recognition protein-1. Yeast SPT16/CDC68 is an essential gene that has been implicated in transcription and cell-cycle regulation. Consistent with our biochemical analysis of FACT, we provide evidence that Spt16/Cdc68 is involved in transcript elongation in vivo. Moreover, FACT specifically interacts with nucleosomes and histone H2A/H2B dimers, indicating that it may work by promoting nucleosome disassembly upon transcription. In support of this model, we show that FACT activity is abrogated by covalently crosslinking nucleosomal histones.

[1]  R. Burgess,et al.  Elution of proteins from sodium dodecyl sulfate-polyacrylamide gels, removal of sodium dodecyl sulfate, and renaturation of enzymatic activity: results with sigma subunit of Escherichia coli RNA polymerase, wheat germ DNA topoisomerase, and other enzymes. , 1980, Analytical biochemistry.

[2]  D. Rhodes,et al.  Eukaryotic RNA polymerase II binds to nucleosome cores from transcribed genes , 1983, Nature.

[3]  G. C. Johnston,et al.  Size selection identifies new genes that regulate Saccharomyces cerevisiae cell proliferation. , 1990, Genetics.

[4]  HMG1-related DNA-binding protein isolated with V-(D)-J recombination signal probes. , 1991, Molecular and cellular biology.

[5]  F. Winston,et al.  Mutations in SPT16/CDC68 suppress cis- and trans-acting mutations that affect promoter function in Saccharomyces cerevisiae. , 1991, Molecular and cellular biology.

[6]  G. C. Johnston,et al.  CDC68, a yeast gene that affects regulation of cell proliferation and transcription, encodes a protein with a highly acidic carboxyl terminus , 1991, Molecular and cellular biology.

[7]  D. Housman,et al.  Isolation and characterization of human cDNA clones encoding a high mobility group box protein that recognizes structural distortions to DNA caused by binding of the anticancer agent cisplatin. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[8]  F. Winston,et al.  Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection. , 1992, Trends in genetics : TIG.

[9]  A. Wolffe,et al.  A role for histones H2A/H2B in chromatin folding and transcriptional repression. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[10]  L. Breeden,et al.  Differential effects of Cdc68 on cell cycle-regulated promoters in Saccharomyces cerevisiae , 1994, Molecular and cellular biology.

[11]  J. Workman,et al.  Experimental analysis of chromatin function in transcription control. , 1994, Critical reviews in eukaryotic gene expression.

[12]  J. Yates,et al.  An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database , 1994, Journal of the American Society for Mass Spectrometry.

[13]  G. C. Johnston,et al.  Sug1 modulates yeast transcription activation by Cdc68 , 1995, Molecular and cellular biology.

[14]  J. Workman,et al.  Stimulation of transcription factor binding and histone displacement by nucleosome assembly protein 1 and nucleoplasmin requires disruption of the histone octamer , 1995, Molecular and cellular biology.

[15]  Gregory L. Verdine,et al.  Cloning of a yeast 8-oxoguanine DNA glycosylase reveals the existence of a base-excision DNA-repair protein superfamily , 1996, Current Biology.

[16]  D. Reines,et al.  Mutations in the Second Largest Subunit of RNA Polymerase II Cause 6-Azauracil Sensitivity in Yeast and Increased Transcriptional Arrest in Vitro(*) , 1996, The Journal of Biological Chemistry.

[17]  R. Reeves,et al.  High-mobility-group chromosomal proteins: architectural components that facilitate chromatin function. , 1996, Progress in nucleic acid research and molecular biology.

[18]  T Lagrange,et al.  The general transcription factors of RNA polymerase II. , 1996, Genes & development.

[19]  M.Mitchell Smith,et al.  Histone octamer function in vivo: mutations in the dimer–tetramer interfaces disrupt both gene activation and repression , 1997, The EMBO journal.

[20]  T. Formosa,et al.  The Saccharomyces cerevisiae DNA polymerase alpha catalytic subunit interacts with Cdc68/Spt16 and with Pob3, a protein similar to an HMG1-like protein , 1997, Molecular and cellular biology.

[21]  G. C. Johnston,et al.  Characterization of the CP Complex, an Abundant Dimer of Cdc68 and Pob3 Proteins That Regulates Yeast Transcriptional Activation and Chromatin Repression* , 1998, The Journal of Biological Chemistry.

[22]  F. Winston,et al.  Evidence that Spt4, Spt5, and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae. , 1998, Genes & development.

[23]  G. Orphanides,et al.  FACT, a Factor that Facilitates Transcript Elongation through Nucleosomes , 1998, Cell.

[24]  K. Yano,et al.  DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs. , 1998, Genes & development.

[25]  G. C. Johnston,et al.  The yeast protein complex containing cdc68 and pob3 mediates core-promoter repression through the cdc68 N-terminal domain. , 1998, Genetics.

[26]  J. Workman,et al.  Alteration of nucleosome structure as a mechanism of transcriptional regulation. , 1998, Annual review of biochemistry.

[27]  K. Struhl Histone acetylation and transcriptional regulatory mechanisms. , 1998, Genes & development.

[28]  G. Orphanides,et al.  Requirement of RSF and FACT for transcription of chromatin templates in vitro. , 1998, Science.