Mining genes involved in the stratification of Paris Polyphylla seeds using high-throughput embryo Transcriptome sequencing

[1]  Songnian Hu,et al.  Mining genes involved in the stratification of Paris Polyphyllaseeds using high-throughput embryo Transcriptome sequencing , 2013, BMC Genomics.

[2]  Ruling Wang,et al.  Transcriptome analysis of Sacha Inchi (Plukenetia volubilis L.) seeds at two developmental stages , 2012, BMC Genomics.

[3]  Yan Xu,et al.  Identification of the dehydrin gene family from grapevine species and analysis of their responsiveness to various forms of abiotic and biotic stress , 2012, BMC Plant Biology.

[4]  A. H. Markhart,et al.  Characterization of a novel Y2K-type dehydrin VrDhn1 from Vigna radiata. , 2012, Plant & cell physiology.

[5]  Jia Li,et al.  Genetic Evidence for an Indispensable Role of Somatic Embryogenesis Receptor Kinases in Brassinosteroid Signaling , 2012, PLoS genetics.

[6]  C. Weekley,et al.  Assembly, Gene Annotation and Marker Development Using 454 Floral Transcriptome Sequences in Ziziphus Celata (Rhamnaceae), a Highly Endangered, Florida Endemic Plant , 2011, DNA research : an international journal for rapid publication of reports on genes and genomes.

[7]  E. Nambara,et al.  Seed biology in the 21st century: perspectives and new directions. , 2012, Plant & cell physiology.

[8]  Kazuki Saito,et al.  Tissue-specific transcriptome analysis reveals cell wall metabolism, flavonol biosynthesis and defense responses are activated in the endosperm of germinating Arabidopsis thaliana seeds. , 2012, Plant & cell physiology.

[9]  K. Shinozaki,et al.  Advances in Omics and Bioinformatics Tools for Systems Analyses of Plant Functions , 2011, Plant & cell physiology.

[10]  S. Footitt,et al.  Dormancy cycling in Arabidopsis seeds is controlled by seasonally distinct hormone-signaling pathways , 2011, Proceedings of the National Academy of Sciences.

[11]  Gerhard Leubner-Metzger,et al.  First off the mark: early seed germination. , 2011, Journal of experimental botany.

[12]  C. Helliwell,et al.  ALTERED MERISTEM PROGRAM 1 Is involved in Development of Seed Dormancy in Arabidopsis , 2011, PloS one.

[13]  T. Mizoguchi,et al.  Double loss-of-function mutation in EARLY FLOWERING 3 and CRYPTOCHROME 2 genes delays flowering under continuous light but accelerates it under long days and short days: an important role for Arabidopsis CRY2 to accelerate flowering time in continuous light. , 2011, Journal of experimental botany.

[14]  M. Cloutier,et al.  Genome-Wide Analysis Reveals Gene Expression and Metabolic Network Dynamics during Embryo Development in Arabidopsis1[W][OA] , 2011, Plant Physiology.

[15]  Fiona C. Robertson,et al.  The circadian oscillator gene GIGANTEA mediates a long-term response of the Arabidopsis thaliana circadian clock to sucrose , 2011, Proceedings of the National Academy of Sciences.

[16]  Shen Yang Rule of breaking Paris polyphylla var. yunnanensis seed dormancy under fluctuating temperature stratification and content changes of endogenous hormone , 2011 .

[17]  S. Horvath,et al.  Global analysis of gene activity during Arabidopsis seed development and identification of seed-specific transcription factors. , 2010, Proceedings of the National Academy of Sciences of the United States of America.

[18]  Bingru Huang,et al.  Differential accumulation of dehydrins in response to water stress for hybrid and common bermudagrass genotypes differing in drought tolerance. , 2010, Journal of plant physiology.

[19]  Ying Li,et al.  De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis , 2010, BMC Genomics.

[20]  L. Nitsch,et al.  Semi-viviparous embryo development and dehydrin expression in the mangrove Rhizophora mucronata Lam. , 2010, Sexual Plant Reproduction.

[21]  H. Sakai,et al.  The Gibberellic Acid Stimulated-Like Gene Family in Maize and Its Role in Lateral Root Development1[C][W][OA] , 2009, Plant Physiology.

[22]  Shinjiro Yamaguchi,et al.  Interaction of light and hormone signals in germinating seeds , 2009, Plant Molecular Biology.

[23]  H. McWatters,et al.  SENSITIVE TO FREEZING6 Integrates Cellular and Environmental Inputs to the Plant Circadian Clock1[W][OA] , 2008, Plant Physiology.

[24]  Michael J Holdsworth,et al.  Molecular networks regulating Arabidopsis seed maturation, after-ripening, dormancy and germination. , 2008, The New phytologist.

[25]  C. Steber,et al.  Molecular aspects of seed dormancy. , 2008, Annual review of plant biology.

[26]  Mukesh Jain,et al.  Expression of cell wall invertase and several other genes of sugar metabolism in relation to seed development in sorghum (Sorghum bicolor). , 2008, Journal of plant physiology.

[27]  Y. Hsing,et al.  Late Embryogenesis Abundant Proteins , 2008 .

[28]  D. Hincha,et al.  Functional Divergence of Former Alleles in an Ancient Asexual Invertebrate , 2007, Science.

[29]  Qi Zhao,et al.  [Study on seedling techniques of Paris polyphylla var. yunnanensis]. , 2007, Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica.

[30]  K. Shinozaki,et al.  ABA-Hypersensitive Germination1 encodes a protein phosphatase 2C, an essential component of abscisic acid signaling in Arabidopsis seed. , 2007, The Plant journal : for cell and molecular biology.

[31]  Tiaojiang Xiao,et al.  Phylogeny and classification of Paris (Melanthiaceae) inferred from DNA sequence data. , 2006, Annals of botany.

[32]  C. Robertson McClung,et al.  Plant Circadian Rhythms , 2006, The Plant Cell Online.

[33]  S. Tabata,et al.  Distinct and overlapping roles of two gibberellin 3-oxidases in Arabidopsis development. , 2006, The Plant journal : for cell and molecular biology.

[34]  Eugenia Russinova,et al.  The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE1 Protein Complex Includes BRASSINOSTEROID-INSENSITIVE1[W] , 2006, The Plant Cell Online.

[35]  Jun He,et al.  Advances in studies on and uses of Paris polyphylla var. yunnanensis (Trilliaceae) , 2006 .

[36]  W. Marcotte,et al.  The Arabidopsis Group 1 LATE EMBRYOGENESIS ABUNDANT Protein ATEM6 Is Required for Normal Seed Development1[W] , 2005, Plant Physiology.

[37]  Gerhard Leubner-Metzger,et al.  Plant hormone interactions during seed dormancy release and germination , 2005, Seed Science Research.

[38]  D. E. Somers,et al.  Independent Roles for EARLY FLOWERING 3 and ZEITLUPE in the Control of Circadian Timing, Hypocotyl Length, and Flowering Time1 , 2005, Plant Physiology.

[39]  Mukesh Jain,et al.  Genetic control of cell wall invertases in developing endosperm of maize , 2005, Planta.

[40]  G. Engler,et al.  Differentially expressed genes associated with dormancy or germination of Arabidopsis thaliana seeds , 2005, Planta.

[41]  K. Ljung,et al.  A Family of Auxin-Conjugate Hydrolases That Contributes to Free Indole-3-Acetic Acid Levels during Arabidopsis Germination1 , 2004, Plant Physiology.

[42]  C. Baskin,et al.  A classification system for seed dormancy , 2004, Seed Science Research.

[43]  Yuji Kamiya,et al.  Activation of Gibberellin Biosynthesis and Response Pathways by Low Temperature during Imbibition of Arabidopsis thaliana Seeds On-line version contains Web-only data. , 2004, The Plant Cell Online.

[44]  Sunchung Park,et al.  An auxin-repressed gene (RpARP) from black locust (Robinia pseudoacacia) is posttranscriptionally regulated and negatively associated with shoot elongation. , 2003, Tree physiology.

[45]  Masatomo Kobayashi,et al.  Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins , 2003, Journal of Plant Research.

[46]  刘 干中,et al.  The essentials of traditional Chinese herbal medicine , 2003 .

[47]  Thomas D. Schmittgen,et al.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.

[48]  A. Peeters,et al.  The Arabidopsis aldehyde oxidase 3 (AAO3) gene product catalyzes the final step in abscisic acid biosynthesis in leaves. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[49]  Daniel J. Cosgrove,et al.  Loosening of plant cell walls by expansins , 2000, Nature.

[50]  A. Kermode,et al.  An increase in pectin methyl esterase activity accompanies dormancy breakage and germination of yellow cedar seeds. , 2000, Plant physiology.

[51]  A. Müller,et al.  IAA-Synthase, an Enzyme Complex from Arabidopsis thaliana Catalyzing the Formation of Indole-3-Acetic Acid from (S)-Tryptophan , 2000, Biological chemistry.

[52]  K. Bradford,et al.  A germination-specific endo-beta-mannanase gene is expressed in the micropylar endosperm cap of tomato seeds. , 2000, Plant physiology.

[53]  A. Murphy,et al.  Regulation of auxin transport by aminopeptidases and endogenous flavonoids , 2000, Planta.

[54]  Cortelazzo,et al.  Xyloglucan mobilisation in cotyledons of developing plantlets of Hymenaea courbaril L. (Leguminosae-Caesalpinoideae). , 2000, Plant science : an international journal of experimental plant biology.

[55]  H. Kawaide,et al.  Cloning and molecular analyses of a gibberellin 20-oxidase gene expressed specifically in developing seeds of watermelon. , 1999, Plant physiology.

[56]  K. Thompson Book Reviews..: Seeds: Ecology, Biogeography, and Evolution of Dormancy and Germination , 1999 .

[57]  C. Baskin,et al.  Seeds: Ecology, Biogeography, and, Evolution of Dormancy and Germination , 1998 .

[58]  D. McCarty,et al.  Specific oxidative cleavage of carotenoids by VP14 of maize. , 1997, Science.

[59]  C. Simmons The Physiology and Molecular Biology of Plant 1,3-β-D-Glucanases and 1,3;1,4-β-D-Glucanases , 1994 .

[60]  W. E. Dyer Dormancy‐associated embryonic mRNAs and proteins in imbibing Avena fatua caryopses , 1993 .

[61]  C. Sidebottom,et al.  Molecular characterization of a xyloglucan-specific endo-(1-->4)-beta-D-glucanase (xyloglucan endo-transglycosylase) from nasturtium seeds. , 1993, The Plant journal : for cell and molecular biology.

[62]  Thomas D. Schmittgen,et al.  Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2 2 DD C T Method , 2022 .