Automatic anatomy recognition in whole-body PET/CT images.

PURPOSE Whole-body positron emission tomography/computed tomography (PET/CT) has become a standard method of imaging patients with various disease conditions, especially cancer. Body-wide accurate quantification of disease burden in PET/CT images is important for characterizing lesions, staging disease, prognosticating patient outcome, planning treatment, and evaluating disease response to therapeutic interventions. However, body-wide anatomy recognition in PET/CT is a critical first step for accurately and automatically quantifying disease body-wide, body-region-wise, and organwise. This latter process, however, has remained a challenge due to the lower quality of the anatomic information portrayed in the CT component of this imaging modality and the paucity of anatomic details in the PET component. In this paper, the authors demonstrate the adaptation of a recently developed automatic anatomy recognition (AAR) methodology [Udupa et al., "Body-wide hierarchical fuzzy modeling, recognition, and delineation of anatomy in medical images," Med. Image Anal. 18, 752-771 (2014)] to PET/CT images. Their goal was to test what level of object localization accuracy can be achieved on PET/CT compared to that achieved on diagnostic CT images. METHODS The authors advance the AAR approach in this work in three fronts: (i) from body-region-wise treatment in the work of Udupa et al. to whole body; (ii) from the use of image intensity in optimal object recognition in the work of Udupa et al. to intensity plus object-specific texture properties, and (iii) from the intramodality model-building-recognition strategy to the intermodality approach. The whole-body approach allows consideration of relationships among objects in different body regions, which was previously not possible. Consideration of object texture allows generalizing the previous optimal threshold-based fuzzy model recognition method from intensity images to any derived fuzzy membership image, and in the process, to bring performance to the level achieved on diagnostic CT and MR images in body-region-wise approaches. The intermodality approach fosters the use of already existing fuzzy models, previously created from diagnostic CT images, on PET/CT and other derived images, thus truly separating the modality-independent object assembly anatomy from modality-specific tissue property portrayal in the image. RESULTS Key ways of combining the above three basic ideas lead them to 15 different strategies for recognizing objects in PET/CT images. Utilizing 50 diagnostic CT image data sets from the thoracic and abdominal body regions and 16 whole-body PET/CT image data sets, the authors compare the recognition performance among these 15 strategies on 18 objects from the thorax, abdomen, and pelvis in object localization error and size estimation error. Particularly on texture membership images, object localization is within three voxels on whole-body low-dose CT images and 2 voxels on body-region-wise low-dose images of known true locations. Surprisingly, even on direct body-region-wise PET images, localization error within 3 voxels seems possible. CONCLUSIONS The previous body-region-wise approach can be extended to whole-body torso with similar object localization performance. Combined use of image texture and intensity property yields the best object localization accuracy. In both body-region-wise and whole-body approaches, recognition performance on low-dose CT images reaches levels previously achieved on diagnostic CT images. The best object recognition strategy varies among objects; the proposed framework however allows employing a strategy that is optimal for each object.

[1]  Anthony P. Reeves,et al.  Automated segmentation of cardiac visceral fat in low-dose non-contrast chest CT images , 2015, Medical Imaging.

[2]  Paul Kinahan,et al.  Tumor delineation using PET in head and neck cancers: threshold contouring and lesion volumes. , 2006, Medical physics.

[3]  Antonio Criminisi,et al.  Regression forests for efficient anatomy detection and localization in computed tomography scans , 2013, Medical Image Anal..

[4]  Temesguen Messay,et al.  Segmentation of pulmonary nodules in computed tomography using a regression neural network approach and its application to the Lung Image Database Consortium and Image Database Resource Initiative dataset , 2015, Medical Image Anal..

[5]  Abass Alavi,et al.  Nononcological Applications of Positron Emission Tomography for Evaluation of the Thorax , 2013, Journal of thoracic imaging.

[6]  Ben Glocker,et al.  Joint Classification-Regression Forests for Spatially Structured Multi-object Segmentation , 2012, ECCV.

[7]  Elena Casiraghi,et al.  Liver segmentation from computed tomography scans: A survey and a new algorithm , 2009, Artif. Intell. Medicine.

[8]  Aly A. Farag,et al.  Automatic Lung Segmentation of Volumetric Low-Dose CT Scans Using Graph Cuts , 2008, ISVC.

[9]  Anne Bol,et al.  Tri-dimensional automatic segmentation of PET volumes based on measured source-to-background ratios: influence of reconstruction algorithms. , 2003, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[10]  Song Wang,et al.  Automatic localization of solid organs on 3D CT images by a collaborative majority voting decision based on ensemble learning , 2012, Comput. Medical Imaging Graph..

[11]  Laurent D. Cohen,et al.  Automatic Detection and Segmentation of Kidneys in 3 D CT Images Using Random Forests , 2012 .

[12]  Yiqiang Zhan,et al.  Active Scheduling of Organ Detection and Segmentation in Whole-Body Medical Images , 2008, MICCAI.

[13]  D. Townsend Multimodality imaging of structure and function , 2008, Physics in medicine and biology.

[14]  H. Lameckera,et al.  Automatic Segmentation of Mandibles in Low-Dose CT-Data , 2006 .

[15]  Hans Frimmel,et al.  Centerline-based colon segmentation for CT colonography. , 2005, Medical physics.

[16]  Xiangrong Zhou,et al.  Automatic anatomy partitioning of the torso region on CT images by using multiple organ localizations with a group-wise calibration technique , 2015, Medical Imaging.

[17]  Ronald M. Summers,et al.  Automated segmentation of thyroid gland on CT images with multi-atlas label fusion and random classification forest , 2015, Medical Imaging.

[18]  Anthony P. Reeves,et al.  Automated measurement of pulmonary artery in low-dose non-contrast chest CT images , 2015, Medical Imaging.

[19]  Abass Alavi,et al.  Oncological Applications of Positron Emission Tomography for Evaluation of the Thorax , 2013, Journal of thoracic imaging.

[20]  Isabelle Bloch,et al.  Multi-organ localization with cascaded global-to-local regression and shape prior , 2015, Medical Image Anal..

[21]  Jayaram K. Udupa,et al.  Body-wide anatomy recognition in PET/CT images , 2015, Medical Imaging.

[22]  Dean Billheimer,et al.  Prospective feasibility trial of radiotherapy target definition for head and neck cancer using 3-dimensional PET and CT imaging. , 2004, Journal of nuclear medicine : official publication, Society of Nuclear Medicine.

[23]  Chung-Ming Chen,et al.  Automatic segmentation of liver PET images , 2008, Comput. Medical Imaging Graph..

[24]  Seok Lyong Lee,et al.  Solitary Pulmonary Nodule Detection on Thoracic CT Images through Object Continuity Analyses , 2013 .

[25]  Christian Roux,et al.  A Fuzzy Locally Adaptive Bayesian Segmentation Approach for Volume Determination in PET , 2009, IEEE Transactions on Medical Imaging.

[26]  E. W. Shrigley Medical Physics , 1944, British medical journal.

[27]  Milan Sonka,et al.  Image Processing, Analysis and Machine Vision , 1993, Springer US.

[28]  Jayaram K. Udupa,et al.  Automatic anatomy recognition of sparse objects , 2015, Medical Imaging.

[29]  Ronald M. Summers,et al.  Statistical 4D graphs for multi-organ abdominal segmentation from multiphase CT , 2012, Medical Image Anal..

[30]  Ye Xu,et al.  MDCT-based 3-D texture classification of emphysema and early smoking related lung pathologies , 2006, IEEE Transactions on Medical Imaging.

[31]  Huan Yu,et al.  Coregistered FDG PET/CT-Based Textural Characterization of Head and Neck Cancer for Radiation Treatment Planning , 2009, IEEE Transactions on Medical Imaging.

[32]  Wilson Roa,et al.  A local contrast based approach to threshold segmentation for PET target volume delineation. , 2006, Medical physics.

[33]  J. Buatti,et al.  Globally Optimal Tumor Segmentation in PET-CT Images: A Graph-Based Co-segmentation Method , 2011, IPMI.

[34]  Jayaram K. Udupa,et al.  Body-wide hierarchical fuzzy modeling, recognition, and delineation of anatomy in medical images , 2014, Medical Image Anal..

[35]  Yoshinobu Sato,et al.  Construction of Hierarchical Multi-Organ Statistical Atlases and Their Application to Multi-Organ Segmentation from CT Images , 2008, MICCAI.

[36]  Akinobu Shimizu,et al.  Segmentation of multiple organs in non-contrast 3D abdominal CT images , 2007, International Journal of Computer Assisted Radiology and Surgery.

[37]  Laurent D. Cohen,et al.  Automatic Detection and Segmentation of Kidneys in 3D CT Images Using Random Forests , 2012, MICCAI.

[38]  S Tangaro,et al.  A completely automated CAD system for mass detection in a large mammographic database. , 2006, Medical physics.

[39]  W. Roa,et al.  Iterative threshold segmentation for PET target volume delineation. , 2007, Medical physics.

[40]  Jayaram K. Udupa,et al.  Scale-Based Fuzzy Connected Image Segmentation: Theory, Algorithms, and Validation , 2000, Comput. Vis. Image Underst..

[41]  M. Miften,et al.  A region growing method for tumor volume segmentation on PET images for rectal and anal cancer patients. , 2009, Medical physics.

[42]  H Zaidi,et al.  Contourlet-based active contour model for PET image segmentation. , 2013, Medical physics.

[43]  Xinjian Chen,et al.  Joint segmentation of anatomical and functional images: Applications in quantification of lesions from PET, PET-CT, MRI-PET, and MRI-PET-CT images , 2013, Medical Image Anal..

[44]  Anne Bol,et al.  A gradient-based method for segmenting FDG-PET images: methodology and validation , 2007, European Journal of Nuclear Medicine and Molecular Imaging.

[45]  Anthony P. Reeves,et al.  Segmentation of the whole breast from low-dose chest CT images , 2015, Medical Imaging.

[46]  Jayaram K. Udupa,et al.  Joint graph cut and relative fuzzy connectedness image segmentation algorithm , 2013, Medical Image Anal..

[47]  Béla Pataki,et al.  A hybrid system for detecting masses in mammographic images , 2006, IEEE Transactions on Instrumentation and Measurement.

[48]  J Chin,et al.  Prostate cancer multi-feature analysis using trans-rectal ultrasound images , 2005, Physics in medicine and biology.

[49]  Anthony P. Reeves,et al.  Segmentation of the sternum from low-dose chest CT images , 2015, Medical Imaging.