Supplementing glycosylation: A review of applying nucleotide-sugar precursors to growth medium to affect therapeutic recombinant protein glycoform distributions.

Glycosylation is a critical quality attribute (CQA) of many therapeutic proteins, particularly monoclonal antibodies (mAbs), and is a major consideration in the approval of biosimilar biologics due to its effects to therapeutic efficacy. Glycosylation generates a distribution of glycoforms, resulting in glycoproteins with inherent molecule-to-molecule heterogeneity, capable of activating (or failing to activate) different effector functions of the immune system. Glycoforms can be affected by the supplementation of nucleotide-sugar precursors, and related components, to culture growth medium, affecting the metabolism of glycosylation. These supplementations has been demonstrated to increase nucleotide-sugar intracellular pools, and impact glycoform distributions, but with varied results. These variations can be attributed to five key factors: Differences between cell platforms (enzyme/transporter expression levels); differences between recombinant proteins produced (glycan-site accessibility); the fermentation and sampling timeline (glucose availability and exoglycosidase accumulation); glutamine levels (affecting ammonia levels, which impact Golgi pH, as well as UDP-GlcNAc pools); and finally, a lack of standardized metrics for observing shifts in glycoform distributions (glycosylation indices) across different experiments. The purpose of this review is to provide detail and clarity on the state of the art of supplementation strategies for nucleotide-sugar precursors for affecting glycosylation in cell culture processes, and to apply glycosylation indices for standardized comparisons across the field.

[1]  Reed J. Harris,et al.  Analytical Characterization of Monoclonal Antibodies: Linking Structure to Function , 2010 .

[2]  D. Livingston,et al.  In Vivo Clearance of Tissue Plasminogen Activator: The Complex Role of Sites of Glycosylation and Level of Sialylation , 1993 .

[3]  Philippe Girard,et al.  Glycosylation profiles of therapeutic antibody pharmaceuticals. , 2011, European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V.

[4]  Li Fan,et al.  Galactose supplementation enhance sialylation of recombinant Fc-fusion protein in CHO cell: an insight into the role of galactosylation in sialylation , 2015, World Journal of Microbiology and Biotechnology.

[5]  D. James,et al.  Metabolic control of recombinant monoclonal antibody N-glycosylation in GS-NS0 cells. , 2001, Biotechnology and bioengineering.

[6]  H. Miyazaki,et al.  Comparative study of the asparagine-linked sugar chains of human erythropoietins purified from urine and the culture medium of recombinant Chinese hamster ovary cells. , 1988, The Journal of biological chemistry.

[7]  S. Elliott,et al.  Control of rHuEPO biological activity: the role of carbohydrate. , 2004, Experimental hematology.

[8]  A K Patel,et al.  The effect of the removal of sialic acid, galactose and total carbohydrate on the functional activity of Campath-1H. , 1995, Molecular immunology.

[9]  B. Smedsrød,et al.  Clearance of Tissue Plasminogen Activator by Mannose and Galactose Receptors in the Liver , 1990, Thrombosis and Haemostasis.

[10]  S L Morrison,et al.  Studies of aglycosylated chimeric mouse-human IgG. Role of carbohydrate in the structure and effector functions mediated by the human IgG constant region. , 1989, Journal of immunology.

[11]  Jennifer S Griffiths,et al.  Gene-expression profiles for five key glycosylation genes for galactose-fed CHO cells expressing recombinant IL-4/13 cytokine trap. , 2005, Biotechnology and bioengineering.

[12]  H. J. Morton A survey of commercially available tissue culture media , 1970, In Vitro.

[13]  S L Morrison,et al.  Effect of C2-associated carbohydrate structure on Ig effector function: studies with chimeric mouse-human IgG1 antibodies in glycosylation mutants of Chinese hamster ovary cells. , 1998, Journal of immunology.

[14]  E. L. Kean Nuclear cytidine 5'-monophosphosialic acid synthetase. , 1970, The Journal of biological chemistry.

[15]  T Miyamoto,et al.  Effects of galactose depletion from oligosaccharide chains on immunological activities of human IgG. , 1989, The Journal of rheumatology.

[16]  R. Kalaria,et al.  Tau protein directly interacts with the amyloid β-protein precursor: Implications for Alzheimer's disease , 1995, Nature Medicine.

[17]  E. Mayoux,et al.  Mammalian Sugar Transporters , 2014 .

[18]  C. Goochee,et al.  Glycosidase Activities in Chinese Hamster Ovary Cell Lysate and Cell Culture Supernatant , 1993, Biotechnology progress.

[19]  R. Wagner,et al.  Intracellular UDP−N‐Acetylhexosamine Pool Affects N‐Glycan Complexity: A Mechanism of Ammonium Action on Protein Glycosylation , 1998, Biotechnology progress.

[20]  T. Rademacher,et al.  Galactosylation of human IgG monoclonal anti-D produced by EBV-transformed B-lymphoblastoid cell lines is dependent on culture method and affects Fc receptor-mediated functional activity. , 1994, Human antibodies and hybridomas.

[21]  M. Gadgil,et al.  Manganese increases high mannose glycoform on monoclonal antibody expressed in CHO when glucose is absent or limiting: Implications for use of alternate sugars , 2015, Biotechnology progress.

[22]  G. N. Rogers,et al.  Amino acid and manganese supplementation modulates the glycosylation state of erythropoietin in a CHO culture system , 2007, Biotechnology and bioengineering.

[23]  M. Butler,et al.  Effects of nutrient levels and average culture pH on the glycosylation pattern of camelid-humanized monoclonal antibody. , 2014, Journal of biotechnology.

[24]  Daniel I. C. Wang,et al.  Improvement of interferon-gamma sialylation in Chinese hamster ovary cell culture by feeding of N-acetylmannosamine. , 1998, Biotechnology and bioengineering.

[25]  S. Kornfeld,et al.  Impaired intracellular migration and altered solubility of nonglycosylated glycoproteins of vesicular stomatitis virus and Sindbis virus. , 1977, The Journal of biological chemistry.

[26]  G. Vidarsson,et al.  IgG-effector functions: "the good, the bad and the ugly". , 2014, Immunology letters.

[27]  Shigeru Iida,et al.  Establishment of FUT8 knockout Chinese hamster ovary cells: An ideal host cell line for producing completely defucosylated antibodies with enhanced antibody‐dependent cellular cytotoxicity , 2004, Biotechnology and bioengineering.

[28]  J. H. Lee,et al.  Production and characterization of active recombinant human factor II with consistent sialylation , 2017, Biotechnology and bioengineering.

[29]  T. Raju,et al.  Diversity in structure and functions of antibody sialylation in the Fc. , 2014, Current opinion in biotechnology.

[30]  K. Shitara,et al.  Defucosylated Chimeric Anti-CC Chemokine Receptor 4 IgG1 with Enhanced Antibody-Dependent Cellular Cytotoxicity Shows Potent Therapeutic Activity to T-Cell Leukemia and Lymphoma , 2004, Cancer Research.

[31]  Patrick Hossler,et al.  Protein glycosylation control in mammalian cell culture: past precedents and contemporary prospects. , 2012, Advances in biochemical engineering/biotechnology.

[32]  James E. Bailey,et al.  Engineered glycoforms of an antineuroblastoma IgG1 with optimized antibody-dependent cellular cytotoxic activity , 1999, Nature Biotechnology.

[33]  A. Varki,et al.  Implications of the presence of N-glycolylneuraminic acid in recombinant therapeutic glycoproteins , 2010, Nature Biotechnology.

[34]  S. Jung,et al.  The Highly Evolvable Antibody Fc Domain. , 2016, Trends in biotechnology.

[35]  M. Butler,et al.  Tuning a MAb glycan profile in cell culture: Supplementing N-acetylglucosamine to favour G0 glycans without compromising productivity and cell growth. , 2015, Journal of biotechnology.

[36]  J W Fisher,et al.  Glycosylation at specific sites of erythropoietin is essential for biosynthesis, secretion, and biological function. , 1988, The Journal of biological chemistry.

[37]  B Overdijk,et al.  Influence of D-galactosamine on the synthesis of sugar nucleotides and glycoconjugates in rat hepatocytes. , 1995, Glycobiology.

[38]  M. Kawakita,et al.  Molecular physiology and pathology of the nucleotide sugar transporter family (SLC35) , 2004, Pflügers Archiv.

[39]  J. Davies,et al.  Expression of GnTIII in a recombinant anti-CD20 CHO production cell line: Expression of antibodies with altered glycoforms leads to an increase in ADCC through higher affinity for FC gamma RIII. , 2001, Biotechnology and bioengineering.

[40]  Martin Ebeling,et al.  Effects of copper on CHO cells: Insights from gene expression analyses , 2014, Biotechnology progress.

[41]  I. Sternlieb,et al.  Physical and chemical studies on ceruloplasmin. V. Metabolic studies on sialic acid-free ceruloplasmin in vivo. , 1968, The Journal of biological chemistry.

[42]  L. Quek,et al.  Metabolic flux analysis in mammalian cell culture. , 2010, Metabolic engineering.

[43]  Robert M. Anthony,et al.  Recapitulation of IVIG Anti-Inflammatory Activity with a Recombinant IgG Fc , 2008, Science.

[44]  Gregory Stephanopoulos,et al.  Metabolic effects on recombinant interferon‐γ glycosylation in continuous culture of Chinese hamster ovary cells , 1999 .

[45]  Devesh Radhakrishnan,et al.  Identification of manipulated variables for a glycosylation control strategy , 2014, Biotechnology and bioengineering.

[46]  R B Freedman,et al.  Metabolic control of recombinant protein N-glycan processing in NS0 and CHO cells. , 2001, Biotechnology and bioengineering.

[47]  H. Wigzell,et al.  Biological significance of carbohydrate chains on monoclonal antibodies. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[48]  L. Glaser The biosynthesis of N-acetylgalactosamine. , 1959, The Journal of biological chemistry.

[49]  P. V. van Berkel,et al.  Modulation of antibody galactosylation through feeding of uridine, manganese chloride, and galactose , 2011, Biotechnology and bioengineering.

[50]  Z. Shriver,et al.  Chinese hamster ovary cells can produce galactose-α-1,3-galactose antigens on proteins , 2010, Nature Biotechnology.

[51]  G. Wagner,et al.  The structural role of sugars in glycoproteins. , 1996, Current opinion in biotechnology.

[52]  J. Ravetch,et al.  Anti-Inflammatory Activity of Immunoglobulin G Resulting from Fc Sialylation , 2006, Science.

[53]  J. Egrie,et al.  Darbepoetin alfa has a longer circulating half-life and greater in vivo potency than recombinant human erythropoietin. , 2003, Experimental hematology.

[54]  M. Andersen,et al.  Glycoprofiling effects of media additives on IgG produced by CHO cells in fed‐batch bioreactors , 2016, Biotechnology and bioengineering.

[55]  D. Keppler,et al.  D-glucosamine-induced changes in nucleotide metabolism and growth of colon-carcinoma cells in culture. , 1984, The Biochemical journal.

[56]  Raymond A. Dwek,et al.  Emerging Principles for the Therapeutic Exploitation of Glycosylation , 2014, Science.

[57]  G. Salles,et al.  Therapeutic activity of humanized anti-CD20 monoclonal antibody and polymorphism in IgG Fc receptor FcgammaRIIIa gene. , 2002, Blood.

[58]  A. D. de Graaf,et al.  Metabolic flux analysis of CHO cells in perfusion culture by metabolite balancing and 2D [13C, 1H] COSY NMR spectroscopy. , 2010, Metabolic engineering.

[59]  M. Butler,et al.  Effects of Ammonia and Glucosamine on the Heterogeneity of Erythropoietin Glycoforms , 2002, Biotechnology progress.

[60]  Nikolaos Scarmeas,et al.  The good, bad, and ugly? , 2012, Neurology.

[61]  R. Winzler,et al.  Inhibitory effects of D-glucosamine on the growth of Walker 256 carcinosarcoma and on protein, RNA, and DNA synthesis. , 1970, Cancer research.

[62]  P. Umaña,et al.  The carbohydrate at FcgammaRIIIa Asn-162. An element required for high affinity binding to non-fucosylated IgG glycoforms. , 2006, The Journal of biological chemistry.

[63]  S. Kellokumpu,et al.  Organizational Interplay of Golgi N-Glycosyltransferases Involves Organelle Microenvironment-Dependent Transitions between Enzyme Homo- and Heteromers* , 2014, The Journal of Biological Chemistry.

[64]  P. Rudd,et al.  Therapeutic proteins: facing the challenges of glycobiology , 2014, Journal of Health Policy & Outcomes Research.

[65]  R. Knop,et al.  UDP-N-acetylhexosamine modulation by glucosamine and uridine in NCI N-417 variant small cell lung cancer cells: 31P nuclear magnetic resonance results. , 1992, Cancer research.

[66]  E. Goldwasser,et al.  The role of carbohydrate in erythropoietin action. , 1985, Endocrinology.

[67]  R. Jefferis Isotype and glycoform selection for antibody therapeutics. , 2012, Archives of biochemistry and biophysics.

[68]  B. Jang,et al.  D-glucosamine inhibits proliferation of human cancer cells through inhibition of p70S6K. , 2007, Biochemical and biophysical research communications.

[69]  Peifeng Chen,et al.  Effects of elevated ammonium on glycosylation gene expression in CHO cells. , 2006, Metabolic engineering.

[70]  R. Dwek,et al.  Glycosylation changes of IgG associated with rheumatooid arthritis can activate complement via the mannose-binding protein , 1995, Nature Medicine.

[71]  N. Lewis,et al.  A Markov chain model for N-linked protein glycosylation--towards a low-parameter tool for model-driven glycoengineering. , 2016, Metabolic engineering.

[72]  Kazuya Yamano,et al.  Engineering Chinese hamster ovary cells to maximize effector function of produced antibodies using FUT8 siRNA. , 2004, Biotechnology and bioengineering.

[73]  Gillian Dekkers,et al.  IgG Subclasses and Allotypes: From Structure to Effector Functions , 2014, Front. Immunol..

[74]  C. Goochee,et al.  Removal of Sialic Acid from a Glycoprotein in CHO Cell Culture Supernatant by Action of an Extracellular CHO Cell Sialidase , 1995, Bio/Technology.

[75]  B. Scallon,et al.  Higher levels of sialylated Fc glycans in immunoglobulin G molecules can adversely impact functionality. , 2007, Molecular immunology.

[76]  B. Kumpel,et al.  The biological activity of human monoclonal IgG anti-D is reduced by beta-galactosidase treatment. , 1995, Human antibodies and hybridomas.

[77]  R. Wagner,et al.  Incorporation of ammonium into intracellular UDP-activated N-acetylhexosamines and into carbohydrate structures in glycoproteins. , 1999, Biotechnology and bioengineering.

[78]  R. Knop,et al.  Role of Nucleotide Sugar Pools in the Inhibition of NCAM Polysialylation by Ammonia , 1998, Biotechnology progress.

[79]  A. Varki,et al.  Production platforms for biotherapeutic glycoproteins. Occurrence, impact, and challenges of non-human sialylation , 2012, Biotechnology & genetic engineering reviews.

[80]  D. James,et al.  Control of Recombinant Monoclonal Antibody Effector Functions by Fc N‐Glycan Remodeling in Vitro , 2005, Biotechnology progress.

[81]  Sónia Sá Santos,et al.  Cell Growth Arrest by Nucleotides, Nucleosides and Bases as a Tool for Improved Production of Recombinant Proteins , 2003, Biotechnology progress.

[82]  Kelvin H. Lee,et al.  The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line , 2011, Nature Biotechnology.

[83]  R. Wagner,et al.  Ammonium ion and glucosamine dependent increases of oligosaccharide complexity in recombinant glycoproteins secreted from cultivated BHK-21 cells. , 1998, Biotechnology and bioengineering.

[84]  D. James,et al.  CHO cell line specific prediction and control of recombinant monoclonal antibody N‐glycosylation , 2013, Biotechnology and bioengineering.

[85]  S L Morrison,et al.  Effect of altered CH2-associated carbohydrate structure on the functional properties and in vivo fate of chimeric mouse-human immunoglobulin G1 , 1994, The Journal of experimental medicine.

[86]  K. Shitara,et al.  The Absence of Fucose but Not the Presence of Galactose or Bisecting N-Acetylglucosamine of Human IgG1 Complex-type Oligosaccharides Shows the Critical Role of Enhancing Antibody-dependent Cellular Cytotoxicity* , 2003, The Journal of Biological Chemistry.

[87]  V. Quarmby,et al.  Quantitative evaluation of fucose reducing effects in a humanized antibody on Fcγ receptor binding and antibody-dependent cell-mediated cytotoxicity activities , 2012, mAbs.

[88]  H. Perreault,et al.  The availability of glucose to CHO cells affects the intracellular lipid-linked oligosaccharide distribution, site occupancy and the N-glycosylation profile of a monoclonal antibody. , 2014, Journal of biotechnology.

[89]  D. Ouellette,et al.  Arabinosylation of recombinant human immunoglobulin-based protein therapeutics , 2017, mAbs.

[90]  M Goodall,et al.  The influence of glycosylation on the thermal stability and effector function expression of human IgG1-Fc: properties of a series of truncated glycoforms. , 2000, Molecular immunology.

[91]  B Overdijk,et al.  The effect of increasing nucleotide-sugar concentrations on the incorporation of sugars into glycoconjugates in rat hepatocytes. , 1995, The Biochemical journal.

[92]  L. Presta,et al.  Lack of Fucose on Human IgG1 N-Linked Oligosaccharide Improves Binding to Human FcγRIII and Antibody-dependent Cellular Toxicity* , 2002, The Journal of Biological Chemistry.

[93]  M. Butler,et al.  The Role of Glycosylation in Therapeutic Antibodies , 2011 .

[94]  A. McDonald,et al.  Metabolic flux control in glycosylation. , 2016, Current opinion in structural biology.

[95]  Chris Chumsae,et al.  Cell culture media supplementation of infrequently used sugars for the targeted shifting of protein glycosylation profiles , 2017, Biotechnology progress.

[96]  Nicolle H Packer,et al.  Site-specific glycoproteomics confirms that protein structure dictates formation of N-glycan type, core fucosylation and branching. , 2012, Glycobiology.

[97]  R. Dwek,et al.  Changes of serum glycans during sepsis and acute pancreatitis. , 2007, Glycobiology.

[98]  Zhongqi Zhang,et al.  Naturally occurring glycan forms of human immunoglobulins G1 and G2. , 2010, Molecular immunology.

[99]  A. Varki,et al.  Diversity in specificity, abundance, and composition of anti-Neu5Gc antibodies in normal humans: potential implications for disease. , 2008, Glycobiology.

[100]  C. Turano,et al.  Influence of the carbohydrate moiety on the stability of glycoproteins. , 1996, Biochemistry.

[101]  Niki S. C. Wong,et al.  An investigation of intracellular glycosylation activities in CHO cells: Effects of nucleotide sugar precursor feeding , 2010, Biotechnology and bioengineering.

[102]  Kelley W. Moremen,et al.  Vertebrate protein glycosylation: diversity, synthesis and function , 2012, Nature Reviews Molecular Cell Biology.

[103]  P. Bondarenko,et al.  High-mannose glycans on the Fc region of therapeutic IgG antibodies increase serum clearance in humans. , 2011, Glycobiology.

[104]  J. Ravetch,et al.  Agalactosylated IgG antibodies depend on cellular Fc receptors for in vivo activity , 2007, Proceedings of the National Academy of Sciences.

[105]  H. Schachter,et al.  Biosynthetic controls that determine the branching and microheterogeneity of protein-bound oligosaccharides. , 1986, Biochemistry and cell biology = Biochimie et biologie cellulaire.