RWP-RK Domain 3 (OsRKD3) induces somatic embryogenesis in black rice
暂无分享,去创建一个
Nosheen Hussain | Yang-Seok Lee | J. Gutierrez-Marcos | Y. A. Purwestri | F. Susanto | Anis Fauzia | T. R. Nuringtyas | P. Wijayanti | C. Meehan | Windi Mose | H. Putra
[1] V. Sundaresan,et al. Somatic embryo initiation by rice BABY BOOM1 involves activation of zygote-expressed auxin biosynthesis genes. , 2023, The New phytologist.
[2] Jiong Hui Liu,et al. Regulation of WOX11 Expression Represents the Difference Between Direct and Indirect Shoot Regeneration , 2022, Frontiers in Plant Science.
[3] Jia-Wei Wang,et al. A robust mechanism for resetting juvenility during each generation in Arabidopsis , 2022, Nature Plants.
[4] Junhui Wang,et al. Identification of regulatory factors promoting embryogenic callus formation in barley through transcriptome analysis , 2020, BMC plant biology.
[5] Javier F. Palatnik,et al. A GRF-GIF chimeric protein improves the regeneration efficiency of transgenic plants , 2020, Nature Biotechnology.
[6] F. Frugier,et al. The NIN transcription factor coordinates CEP and CLE signaling peptides that regulate nodulation antagonistically , 2020, Nature Communications.
[7] Y. A. Purwestri,et al. Establishment of a plant tissue culture system and genetic transformation for agronomic improvement of Indonesian black rice (Oryza sativa L.) , 2020, Plant Cell, Tissue and Organ Culture (PCTOC).
[8] Li Yang,et al. Jasmonate-mediated wound signalling promotes plant regeneration , 2019, Nature Plants.
[9] Jiamu Du,et al. Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis , 2019, Nature Plants.
[10] Nigel P. Dyer,et al. LiBiNorm: an htseq-count analogue with improved normalisation of Smart-seq2 data and library preparation diagnostics , 2019, PeerJ.
[11] V. Sundaresan,et al. A male-expressed rice embryogenic trigger redirected for asexual propagation through seeds , 2018, Nature.
[12] K. Singh,et al. Genome-wide identification and characterization of gene family for RWP-RK transcription factors in wheat (Triticum aestivum L.) , 2018, PloS one.
[13] Paul T. Tarr,et al. Characterization of somatic embryogenesis initiated from the Arabidopsis shoot apex. , 2018, Developmental biology.
[14] I. Efroni. A Conceptual Framework for Cell Identity Transitions in Plants. , 2018, Plant & cell physiology.
[15] Siobhan M Brady,et al. A Gene Regulatory Network for Cellular Reprogramming in Plant Regeneration , 2018, Plant & cell physiology.
[16] K. Shirasu,et al. Regulation of floral meristem activity through the interaction of AGAMOUS, SUPERMAN, and CLAVATA3 in Arabidopsis , 2017, Plant Reproduction.
[17] Lisha Shen,et al. Embryonic epigenetic reprogramming by a pioneer transcription factor in plants , 2017, Nature.
[18] Gerco C. Angenent,et al. The BABY BOOM Transcription Factor Activates the LEC1-ABI3-FUS3-LEC2 Network to Induce Somatic Embryogenesis1[OPEN] , 2017, Plant Physiology.
[19] Zhou Du,et al. agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update , 2017, Nucleic Acids Res..
[20] R. Pratiwi,et al. Black rice as a functional food in Indonesia , 2017 .
[21] L. Altschmied,et al. RWP-RK domain-containing transcription factors control cell differentiation during female gametophyte development in Arabidopsis. , 2017, The New phytologist.
[22] Jenny Banh,et al. Morphogenic Regulators Baby boom and Wuschel Improve Monocot Transformation[OPEN] , 2016, Plant Cell.
[23] J. Bowman,et al. Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization , 2016, Current Biology.
[24] K. Yamato,et al. An Evolutionarily Conserved Plant RKD Factor Controls Germ Cell Differentiation , 2016, Current Biology.
[25] R. Satija,et al. Root Regeneration Triggers an Embryo-like Sequence Guided by Hormonal Interactions , 2016, Cell.
[26] Mathew G. Lewsey,et al. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape , 2016, Cell.
[27] Sudhir Kumar,et al. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.
[28] V. Loyola-Vargas,et al. The Relationship Between Stress and Somatic Embryogenesis , 2016 .
[29] A. Fehér. Somatic embryogenesis - Stress-induced remodeling of plant cell fate. , 2015, Biochimica et biophysica acta.
[30] H. Ezura,et al. WIND1-based acquisition of regeneration competency in Arabidopsis and rapeseed , 2015, Journal of Plant Research.
[31] Steven L Salzberg,et al. HISAT: a fast spliced aligner with low memory requirements , 2015, Nature Methods.
[32] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[33] T. Girin,et al. The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development. , 2014, Journal of experimental botany.
[34] C. Dean,et al. Epigenetic reprogramming that prevents transgenerational inheritance of the vernalized state , 2014, Nature.
[35] Björn Usadel,et al. Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..
[36] Masaharu Suzuki,et al. Regulation of the seed to seedling developmental phase transition by the LAFL and VAL transcription factor networks , 2014, Wiley interdisciplinary reviews. Developmental biology.
[37] So-Young Park,et al. Bioreactor Culture of Shoots and Somatic Embryos of Medicinal Plants for Production of Bioactive Compounds , 2014 .
[38] Fuguang Li,et al. Induced Expression of AtLEC1 and AtLEC2 Differentially Promotes Somatic Embryogenesis in Transgenic Tobacco Plants , 2013, PloS one.
[39] L. Pâques,et al. Somatic embryogenesis in forestry with a focus on Europe: state-of-the-art, benefits, challenges and future direction , 2013, Tree Genetics & Genomes.
[40] J. A. Teixeira da Silva,et al. Synseed technology-a complete synthesis. , 2013, Biotechnology advances.
[41] S. E. Perry,et al. Identification of Direct Targets of FUSCA3, a Key Regulator of Arabidopsis Seed Development1[C][W][OA] , 2013, Plant Physiology.
[42] Jun-ichi Itoh,et al. RiceFREND: a platform for retrieving coexpressed gene networks in rice , 2012, Nucleic Acids Res..
[43] M. Kubo,et al. AP2-type transcription factors determine stem cell identity in the moss Physcomitrella patens , 2012, Development.
[44] Chongsheng He,et al. Reprogramming of H3K27me3 Is Critical for Acquisition of Pluripotency from Cultured Arabidopsis Tissues , 2012, PLoS genetics.
[45] P. Ronald,et al. Establishment of Glucocorticoid-Mediated Transcriptional Induction of the Rice XA21 Pattern Recognition Receptor , 2012, Journal of Plant Biology.
[46] M. Catterou,et al. De novo shoot organogenesis: from art to science. , 2011, Trends in plant science.
[47] K. Nakajima,et al. The Arabidopsis RWP-RK Protein RKD4 Triggers Gene Expression and Pattern Formation in Early Embryogenesis , 2011, Current Biology.
[48] W. Lukowitz,et al. The RWP-RK Factor GROUNDED Promotes Embryonic Polarity by Facilitating YODA MAP Kinase Signaling , 2011, Current Biology.
[49] X. Zhang,et al. DNA Methylation and Histone Modifications Regulate De Novo Shoot Regeneration in Arabidopsis by Modulating WUSCHEL Expression and Auxin Signaling , 2011, PLoS genetics.
[50] U. Grossniklaus,et al. Members of the RKD transcription factor family induce an egg cell-like gene expression program. , 2011, The Plant journal : for cell and molecular biology.
[51] M. Seki,et al. The AP2/ERF Transcription Factor WIND1 Controls Cell Dedifferentiation in Arabidopsis , 2011, Current Biology.
[52] G. Angenent,et al. Efficient sweet pepper transformation mediated by the BABY BOOM transcription factor , 2011, Plant Cell Reports.
[53] Mingwei Zhang,et al. Phenolic profiles and antioxidant activity of black rice bran of different commercially available varieties. , 2010, Journal of agricultural and food chemistry.
[54] C. Glass,et al. Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. , 2010, Molecular cell.
[55] J. Long,et al. Control of Arabidopsis apical-basal embryo polarity by antagonistic transcription factors , 2010, Nature.
[56] W. Deng,et al. A novel method for induction of plant regeneration via somatic embryogenesis , 2009 .
[57] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[58] Geoffrey J. Barton,et al. Jalview Version 2—a multiple sequence alignment editor and analysis workbench , 2009, Bioinform..
[59] K. Jung,et al. Binary vectors for efficient transformation of rice , 1999, Journal of Plant Biology.
[60] A. Oskooi. Molecular Evolution and Phylogenetics , 2008 .
[61] M. Barton,et al. A Feedback Regulatory Module Formed by LITTLE ZIPPER and HD-ZIPIII Genes[W][OA] , 2007, The Plant Cell Online.
[62] Renze Heidstra,et al. PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development , 2007, Nature.
[63] S. Oka,et al. Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice. , 2006, The Plant journal : for cell and molecular biology.
[64] G. Angenent,et al. Heterologous expression of the BABY BOOM AP2/ERF transcription factor enhances the regeneration capacity of tobacco (Nicotiana tabacum L.) , 2006, Planta.
[65] M. Kang,et al. Antioxidative activities of bran extracts from twenty one pigmented rice cultivars , 2006 .
[66] L. Schauser,et al. Evolution of NIN-Like Proteins in Arabidopsis, Rice, and Lotus japonicus , 2005, Journal of Molecular Evolution.
[67] R. Amasino,et al. The PLETHORA Genes Mediate Patterning of the Arabidopsis Root Stem Cell Niche , 2004, Cell.
[68] Michelle T. Juarez,et al. microRNA-mediated repression of rolled leaf1 specifies maize leaf polarity , 2004, Nature.
[69] Andrey Rzhetsky,et al. Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference , 1992, Journal of Molecular Evolution.
[70] E. Guiderdoni,et al. Plant regeneration from leaf and seed-derived calli and suspension cultures of the African perennial wild rice, Oryza longistaminata , 1990, Plant Cell Reports.
[71] P. Shannon,et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.
[72] V. Sharma,et al. Ectopic Expression of BABY BOOM Triggers a Conversion from Vegetative to Embryonic Growth Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.001941. , 2002, The Plant Cell Online.
[73] N. Chua,et al. The WUSCHEL gene promotes vegetative-to-embryonic transition in Arabidopsis. , 2002, The Plant journal : for cell and molecular biology.
[74] L. Lepiniec,et al. LEAFY COTYLEDON2 encodes a B3 domain transcription factor that induces embryo development , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[75] U. Grossniklaus,et al. The Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 gene is expressed in developing ovules and embryos and enhances embryogenic competence in culture. , 2001, Plant physiology.
[76] Leif Schauser,et al. A plant regulator controlling development of symbiotic root nodules , 1999, Nature.
[77] Robert B Goldberg,et al. Arabidopsis LEAFY COTYLEDON1 Is Sufficient to Induce Embryo Development in Vegetative Cells , 1998, Cell.
[78] U. Goodenough,et al. Mating type in Chlamydomonas is specified by mid, the minus-dominance gene. , 1997, Genetics.
[79] P. McCourt,et al. A regulatory role for the ABI3 gene in the establishment of embryo maturation in Arabidopsis thaliana , 1995 .
[80] C. Peterson,et al. Efficient lipid staining in plant material with sudan red 7B or fluorol [correction of fluoral] yellow 088 in polyethylene glycol-glycerol. , 1991, Biotechnic & histochemistry : official publication of the Biological Stain Commission.
[81] N. Saito. The neighbor-joining method : A new method for reconstructing phylogenetic trees , 1987 .
[82] L. Pauling,et al. Evolutionary Divergence and Convergence in Proteins , 1965 .
[83] F. Steward,et al. GROWTH AND DEVELOPMENT OF CULTURED PLANT CELLS. , 1964, Science.