Shepard: A fast exact match short read aligner
暂无分享,去创建一个
Phillip H. Jones | Joseph Zambreno | Chad Nelson | Kevin Townsend | Bhavani Satyanarayana Rao | Kevin Townsend | Chad Nelson | Joseph Zambreno | Bhavani Satyanarayana Rao
[1] Rainer G. Spallek,et al. Next-generation massively parallel short-read mapping on FPGAs , 2011, ASAP 2011 - 22nd IEEE International Conference on Application-specific Systems, Architectures and Processors.
[2] Cole Trapnell,et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.
[3] Timothy B. Stockwell,et al. The Diploid Genome Sequence of an Individual Human , 2007, PLoS biology.
[4]
R. Durbin,et al.
Mapping Quality Scores Mapping Short Dna Sequencing Reads and Calling Variants Using P ,
2022
.
[5]
Giovanni Manzini,et al.
Opportunistic data structures with applications
,
2000,
Proceedings 41st Annual Symposium on Foundations of Computer Science.
[6]
Martin Dietzfelbinger,et al.
Hash, Displace, and Compress
,
2009,
ESA.
[7]
Siu-Ming Yiu,et al.
SOAP2: an improved ultrafast tool for short read alignment
,
2009,
Bioinform..
[8]
E. Myers,et al.
Basic local alignment search tool.
,
1990,
Journal of molecular biology.
[9]
D. J. Wheeler,et al.
A Block-sorting Lossless Data Compression Algorithm
,
1994
.
[10]
Stephen A. Edwards,et al.
MEMOCODE 2012 hardware/software codesign contest: DNA sequence aligner
,
2012,
Tenth ACM/IEEE International Conference on Formal Methods and Models for Codesign (MEMCODE2012).