PLMD: An updated data resource of protein lysine modifications.

[1]  Yu Xue,et al.  WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes , 2016, Nucleic Acids Res..

[2]  P. Strzyz Post-translational modifications: Extension of the tubulin code , 2016, Nature Reviews Molecular Cell Biology.

[3]  A. Vertegaal,et al.  A comprehensive compilation of SUMO proteomics , 2016, Nature Reviews Molecular Cell Biology.

[4]  S. Khochbin,et al.  The growing landscape of tubulin acetylation: lysine 40 and many more. , 2016, The Biochemical journal.

[5]  Ying Zhang,et al.  Computational prediction of methylation types of covalently modified lysine and arginine residues in proteins , 2016, Briefings Bioinform..

[6]  Johan Auwerx,et al.  Metabolomics-assisted proteomics identifies succinylation and SIRT5 as important regulators of cardiac function , 2016, Proceedings of the National Academy of Sciences.

[7]  Shao-Ping Shi,et al.  SuccFind: a novel succinylation sites online prediction tool via enhanced characteristic strategy , 2015, Bioinform..

[8]  Edward L. Huttlin,et al.  Quantitative Proteomic Atlas of Ubiquitination and Acetylation in the DNA Damage Response. , 2015, Molecular cell.

[9]  Meaghan Morris,et al.  Tau post-translational modifications in wildtype and human amyloid precursor protein transgenic mice , 2015, Nature Neuroscience.

[10]  Jacob D. Jaffe,et al.  Deep, Quantitative Coverage of the Lysine Acetylome Using Novel Anti-acetyl-lysine Antibodies and an Optimized Proteomic Workflow* , 2015, Molecular & Cellular Proteomics.

[11]  Yingming Zhao,et al.  Metabolic Regulation by Lysine Malonylation, Succinylation, and Glutarylation* , 2015, Molecular & Cellular Proteomics.

[12]  B. Garcia,et al.  Quantitative proteomic analysis of histone modifications. , 2015, Chemical reviews.

[13]  E. Weerapana,et al.  Covalent protein modification: the current landscape of residue-specific electrophiles. , 2015, Current opinion in chemical biology.

[14]  María Martín,et al.  UniProt: A hub for protein information , 2015 .

[15]  Bin Zhang,et al.  PhosphoSitePlus, 2014: mutations, PTMs and recalibrations , 2014, Nucleic Acids Res..

[16]  Pierre Thibault,et al.  Large-scale analysis of lysine SUMOylation by SUMO remnant immunoaffinity profiling , 2014, Nature Communications.

[17]  M. Mann,et al.  Uncovering Global SUMOylation Signaling Networks in a Site-Specific Manner , 2014, Nature Structural &Molecular Biology.

[18]  Chunaram Choudhary,et al.  The growing landscape of lysine acetylation links metabolism and cell signalling , 2014, Nature Reviews Molecular Cell Biology.

[19]  Mathias Laga,et al.  A COFRADIC protocol to study protein ubiquitination. , 2014, Journal of proteome research.

[20]  Bing Ren,et al.  Lysine 2-hydroxyisobutyrylation is a widely distributed active histone mark. , 2014, Nature chemical biology.

[21]  Wei Li,et al.  SysPTM 2.0: an updated systematic resource for post-translational modification , 2014, Database J. Biol. Databases Curation.

[22]  Yingming Zhao,et al.  Lysine glutarylation is a protein posttranslational modification regulated by SIRT5. , 2014, Cell metabolism.

[23]  D. Figeys,et al.  The functional diversity of protein lysine methylation , 2014, Molecular systems biology.

[24]  Yu Xue,et al.  CPLM: a database of protein lysine modifications , 2013, Nucleic Acids Res..

[25]  C. Goodman Post-translational modifications: Considering conditions , 2013 .

[26]  Sebastian A. Wagner,et al.  Lysine succinylation is a frequently occurring modification in prokaryotes and eukaryotes and extensively overlaps with acetylation. , 2013, Cell reports.

[27]  Steven A Carr,et al.  Integrated proteomic analysis of post-translational modifications by serial enrichment , 2013, Nature Methods.

[28]  F. Melchior,et al.  Sumoylation: a regulatory protein modification in health and disease. , 2013, Annual review of biochemistry.

[29]  Ning Ma,et al.  BLAST: a more efficient report with usability improvements , 2013, Nucleic Acids Res..

[30]  Hsien-Da Huang,et al.  dbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications , 2012, Nucleic Acids Res..

[31]  Y. Xiong,et al.  Mechanistic insights into the regulation of metabolic enzymes by acetylation , 2012, The Journal of cell biology.

[32]  H. Serve,et al.  Ubiquitination and selective autophagy , 2012, Cell Death and Differentiation.

[33]  E. Greer,et al.  Histone methylation: a dynamic mark in health, disease and inheritance , 2012, Nature Reviews Genetics.

[34]  J. Boeke,et al.  Lysine Succinylation and Lysine Malonylation in Histones* , 2012, Molecular & Cellular Proteomics.

[35]  Zhike Lu,et al.  Identification of 67 Histone Marks and Histone Lysine Crotonylation as a New Type of Histone Modification , 2011, Cell.

[36]  Yu Xue,et al.  CPLA 1.0: an integrated database of protein lysine acetylation , 2010, Nucleic Acids Res..

[37]  Kai Stühler,et al.  Proteome-wide identification of mycobacterial pupylation targets , 2010, Molecular systems biology.

[38]  Sandhya Rani,et al.  Human Protein Reference Database—2009 update , 2008, Nucleic Acids Res..

[39]  M. Peter,et al.  Function and regulation of protein neddylation , 2008, EMBO reports.

[40]  F. Melchior,et al.  Concepts in sumoylation: a decade on , 2007, Nature Reviews Molecular Cell Biology.

[41]  Yi Tang,et al.  Lysine Propionylation and Butyrylation Are Novel Post-translational Modifications in Histones*S , 2007, Molecular & Cellular Proteomics.

[42]  K. Tomer,et al.  Structural characterization of the E2 glycoprotein from Sindbis by lysine biotinylation and LC-MS/MS. , 2006, Virology.

[43]  S. Gygi,et al.  An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets , 2005, Nature Biotechnology.

[44]  M. Mann,et al.  Trypsin Cleaves Exclusively C-terminal to Arginine and Lysine Residues*S , 2004, Molecular & Cellular Proteomics.

[45]  M. Mann,et al.  Proteomic analysis of post-translational modifications , 2003, Nature Biotechnology.

[46]  Zhihong Zhang,et al.  Identification of lysine succinylation as a new post-translational modification. , 2011, Nature chemical biology.