Organization of signal flow in directed networks

Confining an answer to the question of whether and how the coherent operation of network elements is determined by the network structure is the topic of our work. We map the structure of signal flow in directed networks by analysing the degree of edge convergence and the overlap between the in- and output sets of an edge. Definitions of convergence degree and overlap are based on the shortest paths, thus they encapsulate global network properties. Using the defining notions of convergence degree and overlapping set we clarify the meaning of network causality and demonstrate the crucial role of chordless circles. In real-world networks the flow representation distinguishes nodes according to their signal transmitting, processing and control properties. The analysis of real-world networks in terms of flow representation was in accordance with the known functional properties of the network nodes. It is shown that nodes with different signal processing, transmitting and control properties are randomly connected at the global scale, while local connectivity patterns depart from randomness. The grouping of network nodes according to their signal flow properties was unrelated to the network's community structure. We present evidence that the signal flow properties of small-world-like, real-world networks cannot be reconstructed by algorithms used to generate small-world networks. Convergence degree values were calculated for regular oriented trees, and the probability density function for networks grown with the preferential attachment mechanism. For Erdos–Renyi graphs we calculated the probability density function of both convergence degrees and overlaps.

[1]  M. Newman,et al.  Random graphs with arbitrary degree distributions and their applications. , 2000, Physical review. E, Statistical, nonlinear, and soft matter physics.

[2]  Matthieu Latapy,et al.  Computing Communities in Large Networks Using Random Walks , 2004, J. Graph Algorithms Appl..

[3]  T. Nepusz,et al.  Convergence and divergence are mostly reciprocated properties of the connections in the network of cortical areas , 2008, Proceedings of the Royal Society B: Biological Sciences.

[4]  H E Stanley,et al.  Classes of small-world networks. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[5]  J. Stark,et al.  Network motifs: structure does not determine function , 2006, BMC Genomics.

[6]  S. N. Dorogovtsev,et al.  Giant strongly connected component of directed networks. , 2001, Physical review. E, Statistical, nonlinear, and soft matter physics.

[7]  S. Schuster,et al.  Metabolic network structure determines key aspects of functionality and regulation , 2002, Nature.

[8]  Olaf Sporns,et al.  Graph Theory Methods for the Analysis of Neural Connectivity Patterns , 2003 .

[9]  László Kocsis,et al.  Prediction of the main cortical areas and connections involved in the tactile function of the visual cortex by network analysis , 2006, The European journal of neuroscience.

[10]  Mark E. J. Newman,et al.  The Structure and Function of Complex Networks , 2003, SIAM Rev..

[11]  Prahlad T. Ram,et al.  Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular Network , 2005, Science.

[12]  P. Krapivsky,et al.  Stratification in the preferential attachment network , 2009, 0905.1920.

[13]  Christopher L. Magee,et al.  ESD Working Paper Series ESD-WP-2010-01 , 2010 .

[14]  Andrea Lancichinetti,et al.  Benchmarks for testing community detection algorithms on directed and weighted graphs with overlapping communities. , 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

[15]  Pinar Yolum,et al.  Computer and Information Sciences - ISCIS 2005, 20th International Symposium, Istanbul, Turkey, October 26-28, 2005, Proceedings , 2005, ISCIS.

[16]  R. Rosenfeld Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.