Classification of Alzheimer Disease on Imaging Modalities with Deep CNNs Using Cross-Modal Transfer Learning

A recent imaging modality Diffusion Tensor Imaging completes information used from Structural MRI in studies of Alzheimer disease. A large number of recent studies has explored pathologic staging of Alzheimer disease using the Mean Diffusivity maps extracted from the Diffusion Tensor Imaging modality. The Deep Neural Networks are seducing tools for classification of subjects' imaging data in computer-aided diagnosis of Alzheimer's disease. The major problem here is the lack of a publicly available large amount of training data in both modalities. The lack number of training data yields over-fitting phenomena. We propose a method of a cross-modal transfer learning: from Structural MRI to Diffusion Tensor Imaging modality. Models pre-trained on a structural MRI dataset with domain-depended data augmentation are used as initialization of network parameters to train on Mean Diffusivity data. The method shows a reduction of the over-fitting phenomena, improves learning performance, and thus increases the accuracy of prediction. Classifiers are then fused by a majority vote resulting in augmented scores of classification between Normal Control, Alzheimer Patients and Mild Cognitive Impairment subjects on a subset of ADNI dataset.

[1]  Jenny Benois-Pineau,et al.  Classification of sMRI for AD Diagnosis with Convolutional Neuronal Networks: A Pilot 2-D+ \epsilon Study on ADNI , 2017, MMM.

[2]  G. Frisoni,et al.  Structural correlates of early and late onset Alzheimer’s disease: voxel based morphometric study , 2004, Journal of Neurology, Neurosurgery & Psychiatry.

[3]  Jenny Benois-Pineau,et al.  FuseMe: Classification of sMRI images by fusion of Deep CNNs in 2D+ε projections , 2017, CBMI.

[4]  Daoqiang Zhang,et al.  Multi-Domain Transfer Learning for Early Diagnosis of Alzheimer’s Disease , 2016, Neuroinformatics.

[5]  Trevor Darrell,et al.  Caffe: Convolutional Architecture for Fast Feature Embedding , 2014, ACM Multimedia.

[6]  Heidi Johansen-Berg,et al.  Diffusion MRI at 25: Exploring brain tissue structure and function , 2012, NeuroImage.

[7]  Wei Chen,et al.  Automatic Recognition of Mild Cognitive Impairment from MRI Images Using Expedited Convolutional Neural Networks , 2017, ICANN.

[8]  Nick C Fox,et al.  The clinical use of structural MRI in Alzheimer disease , 2010, Nature Reviews Neurology.

[9]  James J. Pekar,et al.  Regionally-specific diffusion tensor imaging in mild cognitive impairment and Alzheimer's disease , 2009, NeuroImage.

[10]  Václav Snásel,et al.  Brain Hemorrhage Diagnosis by Using Deep Learning , 2017, ICMLSC.

[11]  Jenny Benois-Pineau,et al.  3D CNN-based classification using sMRI and MD-DTI images for Alzheimer disease studies , 2018, ArXiv.

[12]  H. Braak,et al.  Neuropathological stageing of Alzheimer-related changes , 2004, Acta Neuropathologica.

[13]  C. Jack,et al.  Prediction of AD with MRI-based hippocampal volume in mild cognitive impairment , 1999, Neurology.

[14]  Yoshua Bengio,et al.  How transferable are features in deep neural networks? , 2014, NIPS.

[15]  Carlo Caltagirone,et al.  Combined volumetry and DTI in subcortical structures of mild cognitive impairment and Alzheimer's disease patients. , 2010, Journal of Alzheimer's disease : JAD.

[16]  Denis Le Bihan,et al.  Looking into the functional architecture of the brain with diffusion MRI , 2003, Nature Reviews Neuroscience.

[17]  Nitish Srivastava,et al.  Dropout: a simple way to prevent neural networks from overfitting , 2014, J. Mach. Learn. Res..

[18]  Y. Nesterov A method for solving the convex programming problem with convergence rate O(1/k^2) , 1983 .

[19]  Bixente Dilharreguy,et al.  Structural hippocampal network alterations during healthy aging: a multi-modal MRI study , 2013, Front. Aging Neurosci..

[20]  Jeannie-Marie S. Leoutsakos,et al.  Longitudinal, region-specific course of diffusion tensor imaging measures in mild cognitive impairment and Alzheimer’s disease , 2013, Alzheimer's & Dementia.

[21]  Chokri Ben Amar,et al.  Classification of Alzheimer’s disease subjects from MRI using hippocampal visual features , 2014, Multimedia Tools and Applications.

[22]  N. Tzourio-Mazoyer,et al.  Automated Anatomical Labeling of Activations in SPM Using a Macroscopic Anatomical Parcellation of the MNI MRI Single-Subject Brain , 2002, NeuroImage.

[23]  M. Filippi,et al.  Robust Automated Detection of Microstructural White Matter Degeneration in Alzheimer’s Disease Using Machine Learning Classification of Multicenter DTI Data , 2013, PloS one.