NFIB facilitates replication licensing by acting as a genome organizer

[1]  Yan Song,et al.  Quantitative measurement of HER2 expression to subclassify ERBB2 unamplified breast cancer , 2022, Laboratory Investigation.

[2]  Zhuqiang Zhang,et al.  Kinetics and mechanisms of mitotic inheritance of DNA methylation and their roles in aging-associated methylome deterioration , 2020, Cell Research.

[3]  Nuno A. Fonseca,et al.  Patterns of somatic structural variation in human cancer genomes , 2020, Nature.

[4]  Jianfeng Pei,et al.  H2A.Z facilitates licensing and activation of early replication origins , 2019, Nature.

[5]  Bridget Carragher,et al.  FACT caught in the act of manipulating the nucleosome , 2019, Nature.

[6]  S. Taraviras,et al.  Replication Licensing Aberrations, Replication Stress, and Genomic Instability. , 2019, Trends in biochemical sciences.

[7]  Hatice S. Kaya-Okur,et al.  CUT&Tag for efficient epigenomic profiling of small samples and single cells , 2019, Nature Communications.

[8]  D. Fenyö,et al.  Transcription shapes DNA replication initiation and termination in human cells , 2018, Nature Structural & Molecular Biology.

[9]  Pier Andrea Borea,et al.  Pharmacology of Adenosine Receptors: The State of the Art. , 2018, Physiological reviews.

[10]  D. Reinberg,et al.  Functions of FACT in Breaking the Nucleosome and Maintaining Its Integrity at the Single-Nucleosome Level. , 2018, Molecular cell.

[11]  T. Swigut,et al.  Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses , 2017, Cell.

[12]  Wan L. Lam,et al.  Nuclear Factor I/B: A Master Regulator of Cell Differentiation with Paradoxical Roles in Cancer , 2017, EBioMedicine.

[13]  M. Botchan,et al.  Mechanisms and regulation of DNA replication initiation in eukaryotes , 2017, Critical reviews in biochemistry and molecular biology.

[14]  N. Haass,et al.  NFIB Mediates BRN2 Driven Melanoma Cell Migration and Invasion Through Regulation of EZH2 and MITF , 2017, EBioMedicine.

[15]  J. Diffley,et al.  Chromatin Controls DNA Replication Origin Selection, Lagging-Strand Synthesis, and Replication Fork Rates , 2017, Molecular cell.

[16]  D. Patel,et al.  Histone chaperone networks shaping chromatin function , 2017, Nature Reviews Molecular Cell Biology.

[17]  K. Cimprich,et al.  Conflict Resolution in the Genome: How Transcription and Replication Make It Work , 2016, Cell.

[18]  C. Lefebvre,et al.  Mutational Profile of Metastatic Breast Cancers: A Retrospective Analysis , 2016, PLoS medicine.

[19]  Mirit I. Aladjem,et al.  Order from clutter: selective interactions at mammalian replication origins , 2016, Nature Reviews Genetics.

[20]  Jing Liang,et al.  FOXK2 Elicits Massive Transcription Repression and Suppresses the Hypoxic Response and Breast Cancer Carcinogenesis. , 2016, Cancer cell.

[21]  Y. Zhang,et al.  Nucleation of DNA repair factors by FOXA1 links DNA demethylation to transcriptional pioneering , 2016, Nature Genetics.

[22]  D. MacAlpine,et al.  DNA replication origins—where do we begin? , 2016, Genes & development.

[23]  S. Nieh,et al.  ARID4B is a good biomarker to predict tumour behaviour and decide WHO grades in gliomas and meningiomas , 2016, Journal of Clinical Pathology.

[24]  K. Struhl,et al.  Selectivity of ORC binding sites and the relation to replication timing, fragile sites, and deletions in cancers , 2016, Proceedings of the National Academy of Sciences.

[25]  Alicia N. Schep,et al.  Nfib Promotes Metastasis through a Widespread Increase in Chromatin Accessibility , 2016, Cell.

[26]  Ji-Ying Song,et al.  Transcription Factor NFIB Is a Driver of Small Cell Lung Cancer Progression in Mice and Marks Metastatic Disease in Patients , 2016, Cell reports.

[27]  S. Bell,et al.  Chromosome Duplication in Saccharomyces cerevisiae , 2016, Genetics.

[28]  N. Rhind,et al.  How and why multiple MCMs are loaded at origins of DNA replication , 2016, BioEssays : news and reviews in molecular, cellular and developmental biology.

[29]  William Stafford Noble,et al.  Distinct epigenetic features of differentiation-regulated replication origins , 2016, Epigenetics & Chromatin.

[30]  N. Rosenfeld,et al.  The somatic mutation profiles of 2,433 breast cancers refines their genomic and transcriptomic landscapes , 2016, Nature Communications.

[31]  Xiaohong Liu,et al.  Oncogenic potential of TSTA3 in breast cancer and its regulation by the tumor suppressors miR-125a-5p and miR-125b , 2016, Tumor Biology.

[32]  Y. D'Aubenton-Carafa,et al.  Replication landscape of the human genome , 2016, Nature Communications.

[33]  Steven J. M. Jones,et al.  Comprehensive Molecular Portraits of Invasive Lobular Breast Cancer , 2015, Cell.

[34]  Scott Cheng‐Hsin Yang,et al.  Replication timing is regulated by the number of MCMs loaded at origins , 2015, Genome research.

[35]  E. Pignotti,et al.  Prognostic role of nuclear factor/IB and bone remodeling proteins in metastatic giant cell tumor of bone: A retrospective study , 2015, Journal of orthopaedic research : official publication of the Orthopaedic Research Society.

[36]  Yan Wang,et al.  Dysfunction of the Reciprocal Feedback Loop between GATA3- and ZEB2-Nucleated Repression Programs Contributes to Breast Cancer Metastasis. , 2015, Cancer cell.

[37]  M. Méchali,et al.  DNA replication origin activation in space and time , 2015, Nature Reviews Molecular Cell Biology.

[38]  Jun S. Liu,et al.  The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans , 2015, Science.

[39]  Lin He,et al.  SCFJFK is a bona fide E3 ligase for ING4 and a potent promoter of the angiogenesis and metastasis of breast cancer , 2015, Genes & development.

[40]  Christopher L. Sansam,et al.  Cyclin-dependent kinase regulates the length of S phase through TICRR/TRESLIN phosphorylation , 2015, Genes & development.

[41]  Paul Nurse,et al.  The spatial and temporal organization of origin firing during the S-phase of fission yeast , 2015, Genome research.

[42]  R. Schiff,et al.  Targeting HER2 for the treatment of breast cancer. , 2015, Annual review of medicine.

[43]  M. Lopes,et al.  New histone supply regulates replication fork speed and PCNA unloading , 2014, The Journal of cell biology.

[44]  Howard Y. Chang,et al.  Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position , 2013, Nature Methods.

[45]  D. MacAlpine,et al.  Chromatin and DNA replication. , 2013, Cold Spring Harbor perspectives in biology.

[46]  Gad Getz,et al.  KDM4A Lysine Demethylase Induces Site-Specific Copy Gain and Rereplication of Regions Amplified in Tumors , 2013, Cell.

[47]  Davide Cittaro,et al.  Genome-wide mapping of human DNA-replication origins: Levels of transcription at ORC1 sites regulate origin selection and replication timing , 2012, Genome research.

[48]  M. Méchali,et al.  Genome-scale identification of active DNA replication origins. , 2012, Methods.

[49]  Danny R. Welch,et al.  Allelic Variation and Differential Expression of the mSIN3A Histone Deacetylase Complex Gene Arid4b Promote Mammary Tumor Growth and Metastasis , 2012, PLoS genetics.

[50]  A. Groth,et al.  Chromatin replication and epigenome maintenance , 2012, Nature Reviews Molecular Cell Biology.

[51]  Samuel Leung,et al.  FOXA1 is an independent prognostic marker for ER-positive breast cancer , 2012, Breast Cancer Research and Treatment.

[52]  Wonshik Han,et al.  NFIB is a potential target for estrogen receptor‐negative breast cancers , 2011, Molecular oncology.

[53]  J. Carroll,et al.  Pioneer transcription factors: establishing competence for gene expression. , 2011, Genes & development.

[54]  Levi Garraway,et al.  Nuclear factor I/B is an oncogene in small cell lung cancer. , 2011, Genes & development.

[55]  J. Cook,et al.  Nucleosomes in the neighborhood , 2011, Epigenetics.

[56]  M. Méchali,et al.  Eukaryotic DNA replication origins: many choices for appropriate answers , 2010, Nature Reviews Molecular Cell Biology.

[57]  A. Shevchenko,et al.  Treslin Collaborates with TopBP1 in Triggering the Initiation of DNA Replication , 2010, Cell.

[58]  Luyang Sun,et al.  LSD1 Is a Subunit of the NuRD Complex and Targets the Metastasis Programs in Breast Cancer , 2009, Cell.

[59]  Michelle D. Wang,et al.  High resolution dynamic mapping of histone-DNA interactions in a nucleosome , 2008, Nature Structural &Molecular Biology.

[60]  G. Ball,et al.  Forkhead-box A1 (FOXA1) expression in breast cancer and its prognostic significance. , 2008, European journal of cancer.

[61]  E. Schwob,et al.  Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication , 2008, Proceedings of the National Academy of Sciences.

[62]  Jiri Bartek,et al.  An Oncogene-Induced DNA Damage Model for Cancer Development , 2008, Science.

[63]  J. Bartek,et al.  Regulation of Replication Fork Progression Through Histone Supply and Demand , 2007, Science.

[64]  Xin Quan Ge,et al.  Dormant origins licensed by excess Mcm2-7 are required for human cells to survive replicative stress. , 2007, Genes & development.

[65]  W. Gu,et al.  Non-transcriptional control of DNA replication by c-Myc , 2007, Nature.

[66]  D. Gilbert.  Replication origin plasticity, Taylor-made: inhibition vs recruitment of origins under conditions of replication stress , 2007, Chromosoma.

[67]  R. Drouin,et al.  Transcriptional regulation of the cyclin-dependent kinase inhibitor 1A (p21) gene by NFI in proliferating human cells , 2006, Nucleic acids research.

[68]  Andrew J. Spakowitz,et al.  Effect of force on mononucleosomal dynamics , 2006, Proceedings of the National Academy of Sciences.

[69]  M. Méchali,et al.  DNA replication origins. , 2006, Cold Spring Harbor perspectives in biology.

[70]  Luyang Sun,et al.  Hypomethylation-linked activation of PAX2 mediates tamoxifen-stimulated endometrial carcinogenesis , 2005, Nature.

[71]  G. Orphanides,et al.  FACT Facilitates Transcription-Dependent Nucleosome Alteration , 2003, Science.

[72]  S. Vashee,et al.  Sequence-independent DNA binding and replication initiation by the human origin recognition complex. , 2003, Genes & development.

[73]  A. E. Sippel,et al.  Transcription factor nuclear factor I proteins form stable homo‐ and heterodimers , 1994, FEBS letters.

[74]  B. Stillman,et al.  A yeast chromosomal origin of DNA replication defined by multiple functional elements. , 1992, Science.

[75]  A. E. Sippel,et al.  Chicken NFI/TGGCA proteins are encoded by at least three independent genes: NFI-A, NFI-B and NFI-C with homologues in mammalian genomes. , 1990, Nucleic acids research.

[76]  Nicolas Mermod,et al.  A family of human CCAAT-box-binding proteins active in transcription and DNA replication: cloning and expression of multiple cDNAs , 1988, Nature.

[77]  J. Hurwitz,et al.  Adenovirus DNA replication in vitro: identification of a host factor that stimulates synthesis of the preterminal protein-dCMP complex. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[78]  OUP accepted manuscript , 2021, Nucleic Acids Research.

[79]  M. DePamphilis.  Eukaryotic DNA replication: anatomy of an origin. , 1993, Annual review of biochemistry.