Microbial ecology to manage processes in environmental biotechnology.

Microbial ecology and environmental biotechnology are inherently tied to each other. The concepts and tools of microbial ecology are the basis for managing processes in environmental biotechnology; and these processes provide interesting ecosystems to advance the concepts and tools of microbial ecology. Revolutionary advancements in molecular tools to understand the structure and function of microbial communities are bolstering the power of microbial ecology. A push from advances in modern materials along with a pull from a societal need to become more sustainable is enabling environmental biotechnology to create novel processes. How do these two fields work together? Five principles illuminate the way: (i) aim for big benefits; (ii) develop and apply more powerful tools to understand microbial communities; (iii) follow the electrons; (iv) retain slow-growing biomass; and (v) integrate, integrate, integrate.

[1]  Bruce E. Rittmann,et al.  Perchlorate reduction in a HYDROGEN‐BASED MEMBRANE–BIOFILM REACTOR , 2002 .

[2]  D A Stahl,et al.  Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology , 1990, Journal of bacteriology.

[3]  Byung Hong Kim,et al.  A mediator-less microbial fuel cell using a metal reducing bacterium, Shewanella putrefaciens , 2002 .

[4]  S. Winogradsky Microbiologie du Sol , 1950 .

[5]  John L. Blum,et al.  The ecology of river algae , 1956, The Botanical Review.

[6]  B. Rittmann,et al.  Hydrogen-based hollow-fiber membrane biofilm reactor (MBfR) for removing oxidized contaminants , 2004 .

[7]  W. Verstraete,et al.  A microbial fuel cell capable of converting glucose to electricity at high rate and efficiency , 2004, Biotechnology Letters.

[8]  I. Mackay Real-time PCR in the microbiology laboratory. , 2004, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[9]  Bruce E Logan,et al.  Extracting hydrogen and electricity from renewable resources. , 2004, Environmental science & technology.

[10]  D. Stahl Evolution, Ecology and Diagnosis: Unity in Variety , 1986, Bio/Technology.

[11]  Hong Liu,et al.  Production of electricity during wastewater treatment using a single chamber microbial fuel cell. , 2004, Environmental science & technology.

[12]  S. Walker,et al.  Quantitative RT-PCR : Pitfalls and Potential , 1999 .

[13]  M. Alexander BIOCHEMICAL ECOLOGY OF SOIL MICROORGANISMS. , 1964, Annual review of microbiology.

[14]  Samer Adham,et al.  Are membrane bioreactors ready for widespread application? , 2005, Environmental science & technology.

[15]  N. Pace,et al.  Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[16]  R Amann,et al.  The identification of microorganisms by fluorescence in situ hybridisation. , 2001, Current opinion in biotechnology.

[17]  T. Marsh Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products. , 1999, Current opinion in microbiology.

[18]  B. Rittmann,et al.  Hydrogen-based, hollow-fiber membrane biofilm reactor for reduction of perchlorate and other oxidized contaminants. , 2004, Water science and technology : a journal of the International Association on Water Pollution Research.

[19]  M. Wagner,et al.  The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach. , 2002, Systematic and applied microbiology.

[20]  P. Mccarty,et al.  Environmental Biotechnology: Principles and Applications , 2000 .

[21]  B. Rittmann The membrane biofilm reactor: the natural partnership of membranes and biofilm. , 2006, Water science and technology : a journal of the International Association on Water Pollution Research.

[22]  George Tchobanoglous,et al.  Wastewater Engineering Treatment Disposal Reuse , 1972 .

[23]  G. Muyzer DGGE/TGGE a method for identifying genes from natural ecosystems. , 1999, Current opinion in microbiology.