Automatic left ventricle segmentation in cardiac MRI using topological stable-state thresholding and region restricted dynamic programming.

RATIONALE AND OBJECTIVES Segmentation of the left ventricle (LV) is very important in the assessment of cardiac functional parameters. The aim of this study is to develop a novel and robust algorithm which can improve the accuracy of automatic LV segmentation on short-axis cardiac magnetic resonance images (MRI). MATERIALS AND METHODS The database used in this study consists of 45 cases obtained from the Sunnybrook Health Sciences Centre. The 45 cases contain 12 ischemic heart failures, 12 non-ischemic heart failures, 12 LV hypertrophies, and 9 normal cases. Three key techniques are developed in this segmentation algorithm: 1) topological stable-state thresholding method is proposed to refine the endocardial contour, 2) an edge map with non-maxima gradient suppression approach, and 3) a region-restricted technique that is proposed to improve the dynamic programming to derive the epicardial boundary. RESULTS The validation experiments were performed on a pool of data sets of 45 cases. For both endo- and epicardial contours of our results, percentage of good contours is about 91%, the average perpendicular distance is about 2 mm, and the overlapping dice metric is about 0.91. The regression and determination coefficient for the experts and our proposed method on the ejection fraction is 1.05 and 0.9048, respectively; they are 0.98 and 0.8221 for LV mass. CONCLUSIONS An automatic method using topological stable-state thresholding and region restricted dynamic programming has been proposed to segment left ventricle in short-axis cardiac MRI. Evaluation results indicate that the proposed segmentation method can improve the accuracy and robust of left ventricle segmentation. The proposed segmentation approach shows the better performance and has great potential in improving the accuracy of computer-aided diagnosis systems in cardiovascular diseases.

[1]  Paul F. Whelan,et al.  Automatic segmentation of the left ventricle cavity and myocardium in MRI data , 2006, Comput. Biol. Medicine.

[2]  Leon Axel,et al.  Semiautomated Segmentation of Myocardial Contours for Fast Strain Analysis in Cine Displacement-Encoded MRI , 2008, IEEE Transactions on Medical Imaging.

[3]  Yi Wang,et al.  Automatic Left Ventricle Segmentation Using Iterative Thresholding and an Active Contour Model With Adaptation on Short-Axis Cardiac MRI , 2010, IEEE Transactions on Biomedical Engineering.

[4]  Caroline Petitjean,et al.  A review of segmentation methods in short axis cardiac MR images , 2011, Medical Image Anal..

[5]  José M. F. Moura,et al.  STACS: new active contour scheme for cardiac MR image segmentation , 2005, IEEE Transactions on Medical Imaging.

[6]  Lianghai Jin,et al.  Using PSO to improve dynamic programming based algorithm for breast mass segmentation , 2010, 2010 IEEE Fifth International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA).

[7]  D. Mozaffarian,et al.  Heart disease and stroke statistics--2010 update: a report from the American Heart Association. , 2010, Circulation.

[8]  S. Allender,et al.  European cardiovascular disease statistics , 2008 .

[9]  N. Otsu A threshold selection method from gray level histograms , 1979 .

[10]  Rudy Lauwereins,et al.  Robust Low Complexity Corner Detector , 2011, IEEE Transactions on Circuits and Systems for Video Technology.

[11]  Ioannis A. Kakadiaris,et al.  Automated left ventricular segmentation in cardiac MRI , 2006, IEEE Transactions on Biomedical Engineering.

[12]  Jürgen Weese,et al.  Automated segmentation of the left ventricle in cardiac MRI , 2004, Medical Image Anal..

[13]  Paul F. Whelan,et al.  Segmentation of the Left Ventricle of the Heart in 3-D+t MRI Data Using an Optimized Nonrigid Temporal Model , 2008, IEEE Transactions on Medical Imaging.

[14]  W. Manning,et al.  Impact of left ventricular trabeculations and papillary muscles on measures of cavity volume and ejection fraction , 2011, Journal of Cardiovascular Magnetic Resonance.

[15]  Jinn-Yi Yeh,et al.  Myocardial border detection by branch-and-bound dynamic programming in magnetic resonance images , 2005, Comput. Methods Programs Biomed..

[16]  Boudewijn P. F. Lelieveldt,et al.  Time Continuous Tracking and Segmentation of Cardiovascular Magnetic Resonance Images Using Multidimensional Dynamic Programming , 2006, Investigative radiology.

[17]  Choukri Mekkaoui,et al.  Serial diffusion tensor MRI and tractography of the mouse heart in-vivo: impact of ischemia on myocardial microstructure , 2011, Journal of Cardiovascular Magnetic Resonance.

[18]  Wieslaw Lucjan Nowinski,et al.  An Image-Based Comprehensive Approach for Automatic Segmentation of Left Ventricle from Cardiac Short Axis Cine MR Images , 2011, Journal of Digital Imaging.

[19]  Amir Averbuch,et al.  Digital image thresholding, based on topological stable-state , 1996, Pattern Recognit..

[20]  D. Alspach A gaussian sum approach to the multi-target identification-tracking problem , 1975, Autom..

[21]  Lianghai Jin,et al.  Characteristic analysis of Otsu threshold and its applications , 2011, Pattern Recognit. Lett..

[22]  Alexander Dick,et al.  Segmentation of Left Ventricle in Cardiac Cine MRI: An Automatic Image-Driven Method , 2009, FIMH.