Antibodies Biotinylated Using a Synthetic Z-domain from Protein A Provide Stringent In Situ Protein Detection

Antibody-based protein profiling on a global scale using immunohistochemistry constitutes an emerging strategy for mapping of the human proteome, which is crucial for an increased understanding of biological processes in the cell. Immunohistochemistry is often performed indirectly using secondary antibodies for detection, with the benefit of signal amplification. Direct immunohistochemistry instead brings the advantage of multiplexing; however, it requires labeling of the primary antibody. Many antibody-labeling kits do not specifically target IgG and may therefore cause labeling of stabilizing proteins present in the antibody solution. A new conjugation method has been developed that utilizes a modified Z-domain of protein A (ZBPA) to specifically target the Fc part of antibodies. The aim of the present study was to compare the ZBPA conjugation method and a commercially available labeling kit, Lightning-Link, for in situ protein detection. Fourteen antibodies were biotinylated with each method and stained using immunohistochemistry. For all antibodies tested, ZBPA biotinylation resulted in distinct immunoreactivity without off-target staining, regardless of the presence of stabilizing proteins in the buffer, whereas the majority of the Lightning-Link biotinylated antibodies displayed a characteristic pattern of nonspecific staining. We conclude that biotinylated ZBPA domain provides a stringent method for antibody biotinylation, advantageous for in situ protein detection in tissues.

[1]  Caroline Kampf,et al.  Production of Tissue Microarrays, Immunohistochemistry Staining and Digitalization Within the Human Protein Atlas , 2012, Journal of visualized experiments : JoVE.

[2]  F. Pontén,et al.  Scalable In Situ Hybridization on Tissue Arrays for Validation of Novel Cancer and Tissue-Specific Biomarkers , 2012, PloS one.

[3]  S. Hober,et al.  Covalent immunoglobulin labeling through a photoactivable synthetic Z domain. , 2011, Bioconjugate chemistry.

[4]  F. Pontén,et al.  The Human Protein Atlas as a proteomic resource for biomarker discovery , 2011, Journal of internal medicine.

[5]  E. Lundberg,et al.  Towards a knowledge-based Human Protein Atlas , 2010, Nature Biotechnology.

[6]  J. Fritschy,et al.  Is my antibody‐staining specific? How to deal with pitfalls of immunohistochemistry , 2008, The European journal of neuroscience.

[7]  F. Pontén,et al.  Evaluation of Monospecific Antibodies: A Comparison Study With Commercial Analogs Using Immunohistochemistry on Tissue Microarrays , 2008, Applied immunohistochemistry & molecular morphology (Print).

[8]  Carolina Wählby,et al.  In Situ Detection of Phosphorylated Platelet-derived Growth Factor Receptor β Using a Generalized Proximity Ligation Method* , 2007, Molecular & Cellular Proteomics.

[9]  K. Dietz,et al.  Albumin in Immunohistochemistry: Foe and Friend , 2006, Applied immunohistochemistry & molecular morphology : AIMM.

[10]  U. Landegren,et al.  Direct observation of individual endogenous protein complexes in situ by proximity ligation , 2006, Nature Methods.

[11]  Erik K. Malm,et al.  A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics* , 2005, Molecular & Cellular Proteomics.

[12]  U. Landegren,et al.  Protein detection using proximity-dependent DNA ligation assays , 2002, Nature Biotechnology.

[13]  G. Prestwich,et al.  Using photolabile ligands in drug discovery and development. , 2000, Trends in biotechnology.

[14]  J. Kononen,et al.  Tissue microarrays for high-throughput molecular profiling of tumor specimens , 1998, Nature Medicine.

[15]  I. Shimada,et al.  NMR study of the interaction between the B domain of staphylococcal protein A and the Fc portion of immunoglobulin G. , 1998, Biochemistry.

[16]  J. Deisenhofer Crystallographic refinement and atomic models of a human Fc fragment and its complex with fragment B of protein A from Staphylococcus aureus at 2.9- and 2.8-A resolution. , 1981, Biochemistry.

[17]  F. Richards,et al.  Use of the avidin-biotin complex for specific staining of biological membranes in electron microscopy. , 1974, Proceedings of the National Academy of Sciences of the United States of America.

[18]  J M Becker,et al.  Inactivation by avidin of biotin-modified bacteriophage. , 1972, Biochimica et biophysica acta.

[19]  Valsamo Anagnostou,et al.  Antibody validation. , 2010, BioTechniques.

[20]  N. Green Avidin. , 1975, Advances in protein chemistry.