Comparative and functional analyses of LYL1 loci establish marsupial sequences as a model for phylogenetic footprinting.
暂无分享,去创建一个
Berthold Göttgens | Frank Grützner | Jane Rogers | Anthony R Green | Sarah Kinston | D. Grafham | J. Rogers | C. Bird | B. Göttgens | A. Green | S. Kinston | J. Graves | F. Grützner | F. Charchar | Michael A Chapman | Darren Grafham | Fadi J Charchar | M. Chapman | Christine P Bird | Jennifer A Marshall Graves | Michael Chapman
[1] A. Green,et al. The SCL gene: from case report to critical hematopoietic regulator. , 1999, Blood.
[2] L. Pennacchio,et al. Genomic strategies to identify mammalian regulatory sequences , 2001, Nature Reviews Genetics.
[3] G. Sutherland,et al. Phorbol ester‐induced transcription of an immediate‐early response gene by human T cells is inhibited by co‐treatment with calcium ionophore , 1994, Journal of cellular biochemistry.
[4] C. Fizames,et al. Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence , 2000, Nature Genetics.
[5] Webb Miller,et al. So many genomes, so little time , 2000, Nature Biotechnology.
[6] M. Goodman,et al. Embryonic ε and γ globin genes of a prosimian primate (Galago crassicaudatus): Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints , 1988 .
[7] T. Waldmann,et al. Chromosomal translocation in a human leukemic stem-cell line disrupts the T-cell antigen receptor delta-chain diversity region and results in a previously unreported fusion transcript. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[8] J. Graves,et al. Chromosome Painting in Marsupials. , 1998, ILAR journal.
[9] S. Pääbo,et al. Intra- and Interspecific Variation in Primate Gene Expression Patterns , 2002, Science.
[10] M. R. Adams,et al. Comparative genomics of the eukaryotes. , 2000, Science.
[11] B. Göttgens,et al. Distinct 5' SCL enhancers direct transcription to developing brain, spinal cord, and endothelium: neural expression is mediated by GATA factor binding sites. , 1999, Developmental biology.
[12] Nicholas L. Bray,et al. AVID: A global alignment program. , 2003, Genome research.
[13] D. Bentley,et al. The pufferfish SLP-1 gene, a new member of the SCL/TAL-1 family of transcription factors. , 1998, Genomics.
[14] L. Hood,et al. A Genomic Regulatory Network for Development , 2002, Science.
[15] A. Carroll,et al. The tal gene undergoes chromosome translocation in T cell leukemia and potentially encodes a helix‐loop‐helix protein. , 1990, The EMBO journal.
[16] Berthold Göttgens,et al. Transcriptional regulation of the stem cell leukemia gene (SCL)--comparative analysis of five vertebrate SCL loci. , 2002, Genome research.
[17] R. Berger,et al. Two distinct mechanisms for the SCL gene activation in the t(1;14) translocation of T‐cell leukemias , 1990, Genes, chromosomes & cancer.
[18] N. M. Brooke,et al. A molecular timescale for vertebrate evolution , 1998, Nature.
[19] B. Turner,et al. Histone acetylation and X inactivation. , 1998, Developmental genetics.
[20] P. J. Wang,et al. Differences in expression, actions and cocaine regulation of two isoforms for the brain transcriptional regulator NAC1 , 2002, Neuroscience.
[21] M. Ohta,et al. Expression of a novel immediate early gene during 12-O-tetradecanoylphorbol-13-acetate-induced macrophagic differentiation of HL-60 cells. , 1991, The Journal of biological chemistry.
[22] J. Weissenbach,et al. Four-hundred million years of conserved synteny of human Xp and Xq genes on three Tetraodon chromosomes. , 2002, Genome research.
[23] R. Hardison. Conserved noncoding sequences are reliable guides to regulatory elements. , 2000, Trends in genetics : TIG.
[24] J. V. Moran,et al. Initial sequencing and analysis of the human genome. , 2001, Nature.
[25] B. Göttgens,et al. Transcription of the SCL gene in erythroid and CD34 positive primitive myeloid cells is controlled by a complex network of lineage-restricted chromatin-dependent and chromatin-independent regulatory elements , 1997, Oncogene.
[26] T. Graves,et al. Surveying Saccharomyces genomes to identify functional elements by comparative DNA sequence analysis. , 2001, Genome research.
[27] Burkhard Morgenstern,et al. DIALIGN2: Improvement of the segment to segment approach to multiple sequence alignment , 1999, German Conference on Bioinformatics.
[28] B. Göttgens,et al. Establishing the transcriptional programme for blood: the SCL stem cell enhancer is regulated by a multiprotein complex containing Ets and GATA factors , 2002, The EMBO journal.
[29] Dominique Mouchiroud,et al. CpGProD: identifying CpG islands associated with transcription start sites in large genomic mammalian sequences , 2002, Bioinform..
[30] J. Graves,et al. The minimal mammalian Y chromosome – the marsupial Y as a model system , 2001, Cytogenetic and Genome Research.
[31] C. Begley,et al. Lineage-restricted regulation of the murine SCL/TAL-1 promoter. , 1995, Blood.
[32] J. Visvader,et al. Differential expression of the LYL, SCL and E2A helix-loop-helix genes within the hemopoietic system. , 1991, Oncogene.
[33] B. Göttgens,et al. Distinct Mechanisms Direct SCL/tal-1 Expression in Erythroid Cells and CD34 Positive Primitive Myeloid Cells* , 1997, The Journal of Biological Chemistry.
[34] J. Graves,et al. The evolution of human chromosome 21: evidence from in situ hybridization in marsupials and a monotreme. , 1992, Genomics.
[35] P. D. de Jong,et al. An improved approach for construction of bacterial artificial chromosome libraries. , 1998, Genomics.
[36] Berthold Göttgens,et al. Analysis of vertebrate SCL loci identifies conserved enhancers , 2000, Nature Biotechnology.
[37] Lior Pachter,et al. VISTA : visualizing global DNA sequence alignments of arbitrary length , 2000, Bioinform..
[38] R. Espinosa,et al. TAL2, a helix-loop-helix gene activated by the (7;9)(q34;q32) translocation in human T-cell leukemia. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[39] M. Goodman,et al. Phylogenetic footprinting reveals unexpected complexity in trans factor binding upstream from the epsilon-globin gene. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[40] J. Graves,et al. BREAK THE RULES : Genetics of Marsupials and Monotremes , 2005 .
[41] E. Green,et al. Comparative genome mapping in the sequence-based era: early experience with human chromosome 7. , 2000, Genome research.
[42] T A Gray,et al. Phylogenetic footprinting reveals a nuclear protein which binds to silencer sequences in the human gamma and epsilon globin genes , 1992, Molecular and cellular biology.
[43] W Miller,et al. Phylogenetic footprinting of hypersensitive site 3 of the beta-globin locus control region. , 1997, Blood.
[44] Webb Miller,et al. Comparative genome analysis delimits a chromosomal domain and identifies key regulatory elements in the α globin cluster , 2001 .
[45] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[46] B. Tang,et al. Syntaxin 10: a member of the syntaxin family localized to the trans-Golgi network. , 1998, Biochemical and biophysical research communications.
[47] T. Werner,et al. MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data. , 1995, Nucleic acids research.
[48] P. Bucher,et al. Searching for regulatory elements in human noncoding sequences. , 1997, Current opinion in structural biology.
[49] S. Smith,et al. Chromosomal translocation involving the beta T cell receptor gene in acute leukemia , 1988, The Journal of experimental medicine.
[50] H. Scherthan,et al. Localisation of the human nuclear factor I/X (NFI/X) gene to chromosome 19p13 and detection of five other related loci at 1p21-22, 1q42-43, 5q15, 11p13 and 20q13 by FISH , 1993, Human Genetics.
[51] B. Göttgens,et al. Transcriptional Regulation of the Stem Cell Leukemia Gene by PU.1 and Elf-1* , 1998, The Journal of Biological Chemistry.