Combining laser capture microdissection with quantitative real-time PCR: Effects of tissue manipulation on RNA quality and gene expression

[1]  E. Petricoin,et al.  Laser Capture Microdissection , 1996, Science.

[2]  C. Holt,et al.  RNA translation in axons. , 2004, Annual review of cell and developmental biology.

[3]  T. Deller,et al.  Laser microdissection of immunolabeled astrocytes allows quantification of astrocytic gene expression , 2004, Journal of Neuroscience Methods.

[4]  Tania Nolan,et al.  Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction. , 2004, Journal of biomolecular techniques : JBT.

[5]  Robert F Bonner,et al.  Selective Gene Expression in Magnocellular Neurons in Rat Supraoptic Nucleus , 2004, The Journal of Neuroscience.

[6]  Stephen A. Bustin,et al.  A-Z of Quantitative PCR , 2004 .

[7]  R. Yolken,et al.  Evaluating RNA status for RT-PCR in extracts of postmortem human brain tissue. , 2004, BioTechniques.

[8]  W. Oertel,et al.  Gene expression profiles derived from single cells in human postmortem brain. , 2004, Brain research. Brain research protocols.

[9]  Huda Akil,et al.  Systematic changes in gene expression in postmortem human brains associated with tissue pH and terminal medical conditions. , 2004, Human molecular genetics.

[10]  Huda Akil,et al.  Effect of agonal and postmortem factors on gene expression profile: quality control in microarray analyses of postmortem human brain , 2004, Biological Psychiatry.

[11]  T. Deller,et al.  Quantification of layer-specific gene expression in the hippocampus: effective use of laser microdissection in combination with quantitative RT-PCR , 2003, Journal of Neuroscience Methods.

[12]  Michael Zuker,et al.  Mfold web server for nucleic acid folding and hybridization prediction , 2003, Nucleic Acids Res..

[13]  P. Ye,et al.  Mouse NG2+ Oligodendrocyte Precursors Express mRNA for Proteolipid Protein But Not Its DM-20 Variant: A Study of Laser Microdissection-Captured NG2+ Cells , 2003, The Journal of Neuroscience.

[14]  H. Koprowski,et al.  Differential expression of growth factors at the cellular level in virus-infected brain , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[15]  Hongqing Guo,et al.  Single-Cell Microarray Analysis in Hippocampus CA1: Demonstration and Validation of Cellular Heterogeneity , 2003, The Journal of Neuroscience.

[16]  J. Warrington,et al.  Accurate and reproducible gene expression profiles from laser capture microdissection, transcript amplification, and high density oligonucleotide microarray analysis. , 2003, The Journal of molecular diagnostics : JMD.

[17]  Teruhiko Yoshida,et al.  A faithful method for PCR-mediated global mRNA amplification and its integration into microarray analysis on laser-captured cells. , 2003, Biochemical and biophysical research communications.

[18]  R. Haque,et al.  Dual regulation of cryptochrome 1 mRNA expression in chicken retina by light and circadian oscillators , 2002, Neuroreport.

[19]  P. Ince,et al.  Quantitative assessment of AMPA receptor mRNA in human spinal motor neurons isolated by laser capture microdissection , 2002, Neuroreport.

[20]  J. DeVoss,et al.  Analysis of neuronal gene expression with laser capture microdissection , 2002, Journal of neuroscience research.

[21]  C. Petito,et al.  Detection of HIV‐1 Gene Sequences in Hippocampal Neurons Isolated from Postmortem AIDS Brains by Laser Capture Microdissection , 2001, Journal of neuropathology and experimental neurology.

[22]  J. Sotelo,et al.  Neurofilament mRNAs are present and translated in the normal and severed sciatic nerve , 2000, Journal of neuroscience research.

[23]  L. Liotta,et al.  IF-LCM: laser capture microdissection of immunofluorescently defined cells for mRNA analysis rapid communication. , 2000, Kidney international.

[24]  David Handelsman,et al.  Quality of nucleic acids extracted from fresh prostatic tissue obtained from TURP procedures. , 2000, The Journal of urology.

[25]  M. Schachner,et al.  Multiple functions of the myelin‐associated glycoprotein MAG (siglec‐4a) in formation and maintenance of myelin , 2000, Glia.

[26]  L. Jin,et al.  Analysis of anterior pituitary hormone mRNA expression in immunophenotypically characterized single cells after laser capture microdissection. , 1999, Laboratory investigation; a journal of technical methods and pathology.

[27]  W R Pearson,et al.  Comparison of DNA sequences with protein sequences. , 1997, Genomics.

[28]  H. Höfler,et al.  Efficiency of Single‐cell Polymerase Chain Reaction from Stained Histologic Slides and Integrity of DNA in Archival Tissue , 1997, Diagnostic molecular pathology : the American journal of surgical pathology, part B.

[29]  K. Semba,et al.  Discriminable excitotoxic effects of ibotenic acid, AMPA, NMDA and quinolinic acid in the rat laterodorsal tegmental nucleus , 1997, Brain Research.

[30]  S. Pardue,et al.  Selective postmortem degradation of inducible heat shock protein 70 (hsp70) mRNAs in rat Brain , 1994, Cellular and Molecular Neurobiology.

[31]  T. Robbins,et al.  Comparative effects of quisqualic and ibotenic acid-induced lesions of the substantia innominata and globus pallidus on the acquisition of a conditional visual discrimination: Differential effects on cholinergic mechanisms , 1989, Neuroscience.

[32]  F. H. Schmidt,et al.  The role of mRNA and protein stability in gene expression , 1989, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[33]  J. Salzer,et al.  The amino acid sequences of the myelin-associated glycoproteins: homology to the immunoglobulin gene superfamily , 1987, The Journal of cell biology.

[34]  S. Dunnett,et al.  Neurotoxic amino acid lesions of the lateral hypothalamus: a parametric comparison of the effects of ibotenate, N-methyl-d,l-aspartate and quisqualate in the rat , 1985, Brain Research.

[35]  W. Stoffel,et al.  Structure and molecular arrangement of proteolipid protein of central nervous system myelin. , 1984, Proceedings of the National Academy of Sciences of the United States of America.

[36]  B. K. Hartman,et al.  Development and maturation of central nervous system myelin: comparison of immunohistochemical localization of proteolipid protein and basic protein in myelin and oligodendrocytes. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[37]  D. Schmechel,et al.  Neurone-specific enolase is a molecular marker for peripheral and central neuroendocrine cells , 1978, Nature.

[38]  F. Goodwin,et al.  Brain endolases as specific markers of neuronal and glial cells. , 1978, Science.

[39]  O. Mueller,et al.  RNA Integrity Number ( RIN ) – Standardization of RNA Quality Control Application , 2004 .

[40]  Zhao-WenZhu,et al.  Gene－expression analysis of single cells－nested polymerase chain reaction after laser microdissection , 2003 .

[41]  M. Jackson,et al.  Gene expression profiles of laser-captured adjacent neuronal subtypes , 1999, Nature Medicine.