Shotgun metagenomics reveals abnormal short-chain fatty acid-producing bacteria and glucose and lipid metabolism of the gut microbiota in patients with schizophrenia

[1]  Fengchun Wu,et al.  The gut microbiome is associated with brain structure and function in schizophrenia , 2021, Scientific Reports.

[2]  P. Biely,et al.  Xylanases of glycoside hydrolase family 30 - An overview. , 2021, Biotechnology advances.

[3]  Austin D. Swafford,et al.  Gut microbiome in Schizophrenia: Altered functional pathways related to immune modulation and atherosclerotic risk , 2020, Brain, Behavior, and Immunity.

[4]  Fengchun Wu,et al.  Altered gut microbiota associated with symptom severity in schizophrenia , 2020, PeerJ.

[5]  N. Golić,et al.  Gut Microbiota Dysbiosis Associated With Altered Production of Short Chain Fatty Acids in Children With Neurodevelopmental Disorders , 2020, Frontiers in Cellular and Infection Microbiology.

[6]  S. Prakash,et al.  Microbial Medicine: Prebiotic and Probiotic Functional Foods to Target Obesity and Metabolic Syndrome , 2020, International journal of molecular sciences.

[7]  Huijue Jia,et al.  Metagenome-wide association of gut microbiome features for schizophrenia , 2020, Nature Communications.

[8]  Mingbang Wang,et al.  Altered gut microbiota and mucosal immunity in patients with schizophrenia , 2020, Brain, Behavior, and Immunity.

[9]  Jinsong Tang,et al.  Alteration of the gut microbiome in first-episode drug-naïve and chronic medicated schizophrenia correlate with regional brain volumes. , 2020, Journal of psychiatric research.

[10]  R. Deberardinis,et al.  Mechanical regulation of glycolysis via cytoskeleton architecture , 2020, Nature.

[11]  Michael Maes,et al.  Gut Dysbiosis Dysregulates Central and Systemic Homeostasis via Suboptimal Mitochondrial Function: Assessment, Treatment and Classification Implications. , 2020, Current topics in medicinal chemistry.

[12]  Li-ya Pan,et al.  Analysis of gut mycobiota in first-episode, drug-naïve Chinese patients with schizophrenia: A pilot study , 2019, Behavioural Brain Research.

[13]  Yan Zhao,et al.  Identifying psychiatric disorder-associated gut microbiota using microbiota-related gene set enrichment analysis , 2019, Briefings Bioinform..

[14]  T. Dinan,et al.  Depression's Unholy Trinity: Dysregulated Stress, Immunity, and the Microbiome. , 2020, Annual review of psychology.

[15]  J. Pełka-Wysiecka,et al.  Analysis of Gut Microbiota and Their Metabolic Potential in Patients with Schizophrenia Treated with Olanzapine: Results from a Six-Week Observational Prospective Cohort Study , 2019, Journal of clinical medicine.

[16]  Yi Lasanajak,et al.  Transplantation of Fecal Microbiota Rich in Short Chain Fatty Acids and Butyric Acid Treat Cerebral Ischemic Stroke by Regulating Gut Microbiota. , 2019, Pharmacological research.

[17]  Huijue Jia,et al.  Transplantation of microbiota from drug-free patients with schizophrenia causes schizophrenia-like abnormal behaviors and dysregulated kynurenine metabolism in mice , 2019, Molecular Psychiatry.

[18]  B. Vervliet,et al.  The role of short-chain fatty acids in microbiota–gut–brain communication , 2019, Nature Reviews Gastroenterology & Hepatology.

[19]  W. Ling,et al.  Supplementation with Sodium Butyrate Modulates the Composition of the Gut Microbiota and Ameliorates High-Fat Diet-Induced Obesity in Mice. , 2019, The Journal of nutrition.

[20]  Peng Xie,et al.  The gut microbiome from patients with schizophrenia modulates the glutamate-glutamine-GABA cycle and schizophrenia-relevant behaviors in mice , 2019, Science Advances.

[21]  M. McInnis,et al.  Effects of Atypical Antipsychotic Treatment and Resistant Starch Supplementation on Gut Microbiome Composition in a Cohort of Patients with Bipolar Disorder or Schizophrenia , 2019, Pharmacotherapy.

[22]  D. Jeste,et al.  Differences in gut microbiome composition between persons with chronic schizophrenia and healthy comparison subjects , 2019, Schizophrenia Research.

[23]  Brielin C. Brown,et al.  Comparative genetic architectures of schizophrenia in East Asian and European populations , 2018, Nature Genetics.

[24]  S. Mande,et al.  ‘NetShift’: a methodology for understanding ‘driver microbes’ from healthy and disease microbiome datasets , 2018, The ISME Journal.

[25]  E. Scruth Valproate for Schizophrenia , 2018, Issues in mental health nursing.

[26]  Songnian Hu,et al.  Analysis of gut microbiota diversity and auxiliary diagnosis as a biomarker in patients with schizophrenia: A cross-sectional study , 2018, Schizophrenia Research.

[27]  Emeran A. Mayer,et al.  The Brain-Gut-Microbiome Axis , 2018, Cellular and molecular gastroenterology and hepatology.

[28]  Sinead M O’Donovan,et al.  Neuron-specific deficits of bioenergetic processes in the dorsolateral prefrontal cortex in schizophrenia , 2018, Molecular Psychiatry.

[29]  G. Waldrop,et al.  Acetyl-CoA carboxylase from Escherichia coli exhibits a pronounced hysteresis when inhibited by palmitoyl-acyl carrier protein. , 2017, Archives of biochemistry and biophysics.

[30]  Y. Bhutia,et al.  Short-Chain Fatty Acid Transporters: Role in Colonic Homeostasis. , 2017, Comprehensive Physiology.

[31]  C. Depp,et al.  Modified Mediterranean Diet for Enrichment of Short Chain Fatty Acids: Potential Adjunctive Therapeutic to Target Immune and Metabolic Dysfunction in Schizophrenia? , 2017, Front. Neurosci..

[32]  SH Song,et al.  The BIG Data Center: from deposition to integration to translation , 2016, Nucleic Acids Res..

[33]  M. Blaut Gut microbiota and energy balance: role in obesity , 2014, Proceedings of the Nutrition Society.

[34]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[35]  C. Spencer,et al.  Biological Insights From 108 Schizophrenia-Associated Genetic Loci , 2014, Nature.

[36]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[37]  Susan P. Holmes,et al.  Waste Not , Want Not : Why Rarefying Microbiome Data is Inadmissible . October 1 , 2013 , 2013 .

[38]  Joshua LaBaer,et al.  Reduced Incidence of Prevotella and Other Fermenters in Intestinal Microflora of Autistic Children , 2013, PloS one.

[39]  V. Tremaroli,et al.  Functional interactions between the gut microbiota and host metabolism , 2012, Nature.

[40]  D. Wilson,et al.  Glycoside hydrolases: Catalytic base/nucleophile diversity , 2010, Biotechnology and bioengineering.

[41]  M. Borodovsky,et al.  Ab initio gene identification in metagenomic sequences , 2010, Nucleic acids research.

[42]  S. Sørensen,et al.  Gut Microbiota in Human Adults with Type 2 Diabetes Differs from Non-Diabetic Adults , 2010, PloS one.

[43]  J. Os,et al.  Schizophrenia , 2009, The Lancet.

[44]  Richard Durbin,et al.  Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .

[45]  Adam Godzik,et al.  Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences , 2006, Bioinform..

[46]  G. Remington,et al.  Characterizing Coronary Heart Disease Risk in Chronic Schizophrenia: High Prevalence of the Metabolic Syndrome , 2004, Canadian journal of psychiatry. Revue canadienne de psychiatrie.

[47]  David A Lewis,et al.  Catching Up on Schizophrenia Natural History and Neurobiology , 2000, Neuron.