Design and Development of Highly Potent HIV-1 Protease Inhibitors with a Crown-Like Oxotricyclic Core as the P2-Ligand To Combat Multidrug-Resistant HIV Variants.

Design, synthesis, and evaluation of a new class of exceptionally potent HIV-1 protease inhibitors are reported. Inhibitor 5 displayed superior antiviral activity and drug-resistance profiles. In fact, this inhibitor showed several orders of magnitude improved antiviral activity over the FDA approved drug darunavir. This inhibitor incorporates an unprecedented 6-5-5 ring-fused crown-like tetrahydropyranofuran as the P2 ligand and an aminobenzothiazole as the P2' ligand with the (R)-hydroxyethylsulfonamide isostere. The crown-like P2 ligand for this inhibitor has been synthesized efficiently in an optically active form using a chiral Diels-Alder catalyst providing a key intermediate in high enantiomeric purity. Two high resolution X-ray structures of inhibitor-bound HIV-1 protease revealed extensive interactions with the backbone atoms of HIV-1 protease and provided molecular insight into the binding properties of these new inhibitors.

[1]  Arun K. Ghosh,et al.  Design of the anti-HIV protease inhibitor darunavir , 2013 .

[2]  Arun K. Ghosh,et al.  Structure-based design of novel HIV-1 protease inhibitors to combat drug resistance. , 2006, Journal of medicinal chemistry.

[3]  Irene T Weber,et al.  Design of HIV-1 protease inhibitors with C3-substituted hexahydrocyclopentafuranyl urethanes as P2-ligands: synthesis, biological evaluation, and protein-ligand X-ray crystal structure. , 2011, Journal of medicinal chemistry.

[4]  S. Cole,et al.  The Effect of Highly Active Antiretroviral Therapy on the Survival of HIV-Infected Children in a Resource-Deprived Setting: A Cohort Study , 2011, PLoS medicine.

[5]  Dirk Jochmans,et al.  TMC114, a Novel Human Immunodeficiency Virus Type 1 Protease Inhibitor Active against Protease Inhibitor-Resistant Viruses, Including a Broad Range of Clinical Isolates , 2005, Antimicrobial Agents and Chemotherapy.

[6]  E. Corey,et al.  Cationic Chiral Fluorinated Oxazaborolidines. More Potent, Second-Generation Catalysts for Highly Enantioselective Cycloaddition Reactions. , 2016, Journal of the American Chemical Society.

[7]  Arun K. Ghosh,et al.  Design and synthesis of potent HIV-1 protease inhibitors incorporating hexahydrofuropyranol-derived high affinity P(2) ligands: structure-activity studies and biological evaluation. , 2011, Journal of medicinal chemistry.

[8]  Irene T Weber,et al.  Design of HIV protease inhibitors targeting protein backbone: an effective strategy for combating drug resistance. , 2008, Accounts of chemical research.

[9]  Irene T. Weber,et al.  HIV-1 Protease: Structural Perspectives on Drug Resistance , 2009, Viruses.

[10]  Arun K. Ghosh,et al.  Darunavir, a New PI with Dual Mechanism: From a Novel Drug Design Concept to New Hope against Drug‐Resistant HIV , 2011 .

[11]  Celia A. Schiffer,et al.  Structural and Thermodynamic Basis for the Binding of TMC114, a Next-Generation Human Immunodeficiency Virus Type 1 Protease Inhibitor , 2004, Journal of Virology.

[12]  Irene T Weber,et al.  High resolution crystal structures of HIV-1 protease with a potent non-peptide inhibitor (UIC-94017) active against multi-drug-resistant clinical strains. , 2004, Journal of molecular biology.

[13]  Arun K. Ghosh,et al.  Design and synthesis of potent macrocyclic HIV-1 protease inhibitors involving P1-P2 ligands. , 2014, Organic & biomolecular chemistry.

[14]  N. Siddiqui,et al.  Biological Aspects of Emerging Benzothiazoles: A Short Review , 2013 .

[15]  J. Yun,et al.  Copper-catalyzed addition of diboron reagents to alpha,beta-acetylenic esters: efficient synthesis of beta-boryl-alpha,beta-ethylenic esters. , 2008, Chemical communications.

[16]  A. Wlodawer,et al.  Crystal structures of the inactive D30N mutant of feline immunodeficiency virus protease complexed with a substrate and an inhibitor. , 1997, Biochemistry.

[17]  E. Corey,et al.  [4 + 2] Cycloaddition reactions catalyzed by a chiral oxazaborolidinium cation. Reaction rates and diastereo-, regio-, and enantioselectivity depend on whether both bonds are formed simultaneously. , 2010, Organic letters.

[18]  Y. Gololobov,et al.  Sixty years of staudinger reaction , 1981 .

[19]  David J. Volsky,et al.  HIV-associated neurocognitive disorder — pathogenesis and prospects for treatment , 2016, Nature Reviews Neurology.

[20]  Arun K. Ghosh,et al.  Design and synthesis of stereochemically defined novel spirocyclic P2-ligands for HIV-1 protease inhibitors. , 2008, Organic letters.

[21]  Irene T. Weber,et al.  Novel bis-Tetrahydrofuranylurethane-Containing Nonpeptidic Protease Inhibitor (PI) UIC-94017 (TMC114) with Potent Activity against Multi-PI-Resistant Human Immunodeficiency Virus In Vitro , 2003, Antimicrobial Agents and Chemotherapy.

[22]  Sonakshi Seth A Comprehensive Review on Recent advances in Synthesis & Pharmacotherapeutic potential of Benzothiazoles. , 2015, Anti-inflammatory & anti-allergy agents in medicinal chemistry.

[23]  G. Marshall,et al.  A simple, continuous fluorometric assay for HIV protease. , 2009, International journal of peptide and protein research.

[24]  Irene T Weber,et al.  Ultra-high resolution crystal structure of HIV-1 protease mutant reveals two binding sites for clinical inhibitor TMC114. , 2006, Journal of molecular biology.

[25]  Arun K. Ghosh,et al.  Recent Progress in the Development of HIV-1 Protease Inhibitors for the Treatment of HIV/AIDS. , 2016, Journal of medicinal chemistry.

[26]  Hiroaki Mitsuya,et al.  Darunavir, a conceptually new HIV-1 protease inhibitor for the treatment of drug-resistant HIV. , 2007, Bioorganic & medicinal chemistry.

[27]  David Dunn,et al.  Demonstration of Sustained Drug-Resistant Human Immunodeficiency Virus Type 1 Lineages Circulating among Treatment-Naïve Individuals , 2009, Journal of Virology.

[28]  T. Cihlar,et al.  Current status and challenges of antiretroviral research and therapy. , 2010, Antiviral research.

[29]  Irene T Weber,et al.  A Novel Bis-Tetrahydrofuranylurethane-Containing Nonpeptidic Protease Inhibitor (PI), GRL-98065, Is Potent against Multiple-PI-Resistant Human Immunodeficiency Virus In Vitro , 2007, Antimicrobial Agents and Chemotherapy.

[30]  Evan Wood,et al.  Association of highly active antiretroviral therapy coverage, population viral load, and yearly new HIV diagnoses in British Columbia, Canada: a population-based study , 2010, The Lancet.

[31]  N. Obel,et al.  Improved survival in HIV-infected persons: consequences and perspectives. , 2007, The Journal of antimicrobial chemotherapy.

[32]  M. Vanstockem,et al.  Darunavir (Prezista, TMC114): From Bench to Clinic, Improving Treatment Options for HIV‐Infected Patients , 2011 .

[33]  D. Walters,et al.  Potent HIV protease inhibitors incorporating high-affinity P2-ligands and (R)-(hydroxyethylamino)sulfonamide isostere. , 1998, Bioorganic & medicinal chemistry letters.

[34]  Arun K. Ghosh,et al.  Bis‐Tetrahydrofuran: a Privileged Ligand for Darunavir and a New Generation of HIV Protease Inhibitors That Combat Drug Resistance , 2006, ChemMedChem.

[35]  Arun K. Ghosh,et al.  In Vitro Selection of Highly Darunavir-Resistant and Replication-Competent HIV-1 Variants by Using a Mixture of Clinical HIV-1 Isolates Resistant to Multiple Conventional Protease Inhibitors , 2010, Journal of Virology.

[36]  Arun K. Ghosh,et al.  GRL-02031, a Novel Nonpeptidic Protease Inhibitor (PI) Containing a Stereochemically Defined Fused Cyclopentanyltetrahydrofuran Potent against Multi-PI-Resistant Human Immunodeficiency Virus Type 1 In Vitro , 2008, Antimicrobial Agents and Chemotherapy.

[37]  K. Sharpless,et al.  Catalytic asymmetric epoxidation and kinetic resolution: modified procedures including in situ derivatization , 1987 .

[38]  David D. Anderson,et al.  Enhancing Protein Backbone Binding—A Fruitful Concept for Combating Drug‐Resistant HIV† , 2012, Angewandte Chemie.

[39]  K. Nicolaou,et al.  An expedient procedure for the oxidative cleavage of olefinic bonds with PhI(OAc)2, NMO, and catalytic OsO4. , 2010, Organic letters.

[40]  Arun K. Ghosh,et al.  A Potent Human Immunodeficiency Virus Type 1 Protease Inhibitor, UIC-94003 (TMC-126), and Selection of a Novel (A28S) Mutation in the Protease Active Site , 2002, Journal of Virology.

[41]  Peter J. Hughes,et al.  Protease Inhibitors for Patients With HIV-1 Infection: A Comparative Overview. , 2011, P & T : a peer-reviewed journal for formulary management.