Self‐assembly of Congo Red—A theoretical and experimental approach to identify its supramolecular organization in water and salt solutions

The supramolecular organization of Congo Red molecules was studied to approach an understanding of the unusual complexation characteristics associated with the liquid crystalline nature of this dye. Differential scanning calorimetry (DSC) and nmr data indicate that Congo Red assembly arrangements differ in water and salt solutions. Compact, highly ordered material with a distinct melting transition is created, but not below 0.3% sodium chloride concentration. The twist in the assembly arrangement of Congo Red molecules, caused in water by repulsion, decreases when the charges are shielded, allowing for more overlapping of the naphthalene rings and their engagement in stacking interaction. The crystallization transition observed in DSC analysis of Congo Red fast-assembled by cooling in salt solutions indicates that the formation of compact crystalline mesophase material is a time-consuming process in which coplanarity and a highly ordered organization must be achieved. Two different superposition variants, called “direct” and “reversed” here, were considered fundamental to compact Congo Red organization. They correspond to optimal face-to-face ring stackings, and are formed by simple direct translation or alternative imposition of reversed (180° rotated) molecules, respectively. In NaCl solution (2.8%) there is a significant downfield chemical shift alteration of the nmr signal related to proton 8, which is in the naphthalene ring on the side opposite to the charged sulfonic group. It was associated selectively with the transition of Congo Red to compact form. This effect confirms the close approach of the sulfonic groups and proton 8, and indicates that formation of the reversed arrangement is favored in the Congo Red supramolecular organization. Molecular dynamics simulation based on AMBER 4.1 force field and analysis of electrostatic field densities around the molecule were used for comparative modeling. Molecular dynamics (150 ps) were simulated for two eight-molecule micelle models constructed to reflect direct and reversed arrangements of Congo Red molecules. Although both versions generally preserved their initial assembly structure in the simulations, the reversed version proved more stable. The proximity of the sulfonic group and proton 8, confirmed by computer analysis, explains the correlation between the formation of Congo Red micellar organization and the distinct shift alteration related to this proton, as found by nmr. © 1998 John Wiley & Sons, Inc. Biopoly 46: 267–281, 1998

[1]  Markus Antonietti,et al.  Superstructures of Functional Colloids: Chemistry on the Nanometer Scale , 1997 .

[2]  Christopher A. Hunter,et al.  The nature of .pi.-.pi. interactions , 1990 .

[3]  L Konieczny,et al.  Bis-azo dyes interference with effector activation of antibodies. , 1993, Journal of physiology and pharmacology : an official journal of the Polish Physiological Society.

[4]  B Henrissat,et al.  Docking of congo red to the surface of crystalline cellulose using molecular mechanics , 1995, Biopolymers.

[5]  G. Glenner,et al.  THE RELATION OF THE PROPERTIES OF CONGO RED-STAINED AMYLOID FIBRILS TO THE β-CONFORMATION , 1972, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[6]  I. Roterman,et al.  The use of congo red as a lyotropic liquid crystal to carry stains in a model immunotargeting system--microscopic studies. , 1997, Folia histochemica et cytobiologica.

[7]  J. Kelly,et al.  The interaction of methylene blue, azure B, and thionine with DNA: Formation of complexes with polynucleotides and mononucleotides as model systems , 1995 .

[8]  G. Glenner,et al.  β-PLEATED SHEET FIBRILS A COMPARISON OF NATIVE AMYLOID WITH SYNTHETIC PROTEIN FIBRILS , 1974, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[9]  N. H. Hartshorne,et al.  Mesomorphism in the System Disodium Chromoglycate-Water , 1973 .

[10]  E. Jacobsen,et al.  On the Mechanism of Asymmetric Nucleophilic Ring-Opening of Epoxides Catalyzed by (Salen)CrIII Complexes , 1996 .

[11]  Jerzy Leszczynski,et al.  Molecular and Electrostatic Properties of the N-methylated Nucleic Acid Bases by Density Functional Theory , 1996 .

[12]  H. Dyson,et al.  Three-dimensional structure of a type VI turn in a linear peptide in water solution. Evidence for stacking of aromatic rings as a major stabilizing factor. , 1994, Journal of molecular biology.

[13]  R. Wetzel,et al.  Physical, morphological and functional differences between ph 5.8 and 7.4 aggregates of the Alzheimer's amyloid peptide Abeta. , 1996, Journal of molecular biology.

[14]  Peter A. Kollman,et al.  Benzene Dimer: A Good Model for π−π Interactions in Proteins? A Comparison between the Benzene and the Toluene Dimers in the Gas Phase and in an Aqueous Solution , 1996 .

[15]  L. D. Ward,et al.  Cooperative multiple binding of bisANS and daunomycin to tubulin. , 1994, Biochemistry.

[16]  W. B. Gleason,et al.  The X-ray Crystal Structure of the Sulfonated Azo Dye Congo Red, a Non-Peptidic Inhibitor of HIV-1 Protease which also Binds to Reverse Transcriptase and Amyloid Proteins , 1995 .

[17]  I Roterman,et al.  Congo red-stabilized intermediates in the lambda light chain transition from native to molten state. , 1996, Biochimie.

[18]  Robert G. Parr,et al.  Density Functional Theory in Chemistry , 1985 .

[19]  J. Herzfeld Entropically Driven Order in Crowded Solutions:  From Liquid Crystals to Cell Biology. , 1996, Accounts of chemical research.

[20]  D. F. Senear,et al.  An aromatic stacking interaction between subunits helps mediate DNA sequence specificity: operator site discrimination by phage lambda cI repressor. , 1997, Journal of molecular biology.

[21]  F. Diederich,et al.  Computer Simulations of the Solvent Dependence of Apolar Association Strength: Gibbs Free Energy Calculations on a Cyclophane−Pyrene Complex in Water and Chloroform , 1996 .

[22]  A. G. Oertli,et al.  Alkaline Lyotropic Silicate−Surfactant Liquid Crystals , 1997 .

[23]  G A Petsko,et al.  Aromatic-aromatic interaction: a mechanism of protein structure stabilization. , 1985, Science.

[24]  C. Hall,et al.  The distinction between chromonic and amphiphilic lyotropic mesophases , 1990 .

[25]  E. Wachtel,et al.  NMR and X-ray studies of the chromonic lyomesophases formed by some xanthone derivatives , 1991 .

[26]  S. J. Cyvin,et al.  Structure and barrier of internal rotation of biphenyl derivatives in the gaseous state: Part 1. The molecular structure and normal coordinate analysis of normal biphenyl and pedeuterated biphenyl , 1985 .

[27]  I Roterman,et al.  Effect of self association of bis-ANS and bis-azo dyes on protein binding. , 1997, Biochimie.

[28]  F. Cohen,et al.  Separation of scrapie prion infectivity from PrP amyloid polymers. , 1996, Journal of molecular biology.

[29]  What forces bind liquid crystals? , 1995, Physical review letters.

[30]  A. N. Veselkov,et al.  1H-NMR structural analysis of ethidium bromide complexation with self-complementary deoxytetranucleotides 5'-d(ApCpGpT), 5'-d(ApGpCpT), and 5'-d(TpGpCpA) in aqueous solution. , 1996, Biopolymers.

[31]  L. Hurley,et al.  Molecular details of the structure of a psorospermin - DNA covalent/intercalation complex and associated DNA sequence selectivity , 1996 .

[32]  K. Beyreuther,et al.  Amyloid-like properties of peptides flanking the epitope of amyloid precursor protein-specific monoclonal antibody 22C11. , 1993, The Journal of biological chemistry.

[33]  C. Hunter,et al.  DNA base-stacking interactions: a comparison of theoretical calculations with oligonucleotide X-ray crystal structures. , 1997, Journal of molecular biology.

[34]  Grace C H Yang,et al.  Ultrastructural immunohistochemical localization of polyclonal IgG, C3, and amyloid P component on the congo red-negative amyloid-like fibrils of fibrillary glomerulopathy. , 1992, The American journal of pathology.

[35]  A. Wang,et al.  Binding of two novel bisdaunorubicins to DNA studied by NMR spectroscopy. , 1997, Biochemistry.

[36]  I Roterman,et al.  Bis azo dyes--studies on the mechanism of complex formation with IgG modulated by heating or antigen binding. , 1993, Journal of physiology and pharmacology : an official journal of the Polish Physiological Society.

[37]  J. Goodfellow,et al.  Solvent interactions with pi ring systems in proteins. , 1995, Protein engineering.

[38]  M. Ubbink,et al.  Complex of plastocyanin and cytochrome c characterized by NMR chemical shift analysis. , 1997, Biochemistry.