Towards grapevine root architectural models to adapt viticulture to drought

To sustainably adapt viticultural production to drought, the planting of rootstock genotypes adapted to a changing climate is a promising means. Rootstocks contribute to the regulation of scion vigor and water consumption, modulate scion phenological development and determine resource availability by root system architecture development. There is, however, a lack of knowledge on spatio-temporal root system development of rootstock genotypes and its interactions with environment and management that prevents efficient knowledge transfer into practice. Hence, winegrowers take only limited advantage of the large variability of existing rootstock genotypes. Models of vineyard water balance combined with root architectural models, using both static and dynamic representations of the root system, seem promising tools to match rootstock genotypes to frequently occurring future drought stress scenarios and address scientific knowledge gaps. In this perspective, we discuss how current developments in vineyard water balance modeling may provide the background for a better understanding of the interplay of rootstock genotypes, environment and management. We argue that root architecture traits are key drivers of this interplay, but our knowledge on rootstock architectures in the field remains limited both qualitatively and quantitatively. We propose phenotyping methods to help close current knowledge gaps and discuss approaches to integrate phenotyping data into different models to advance our understanding of rootstock x environment x management interactions and predict rootstock genotype performance in a changing climate. This could also provide a valuable basis for optimizing breeding efforts to develop new grapevine rootstock cultivars with optimal trait configurations for future growing conditions.

[1]  J. Hervás,et al.  European Soil Data Centre 2.0: Soil data and knowledge in support of the EU policies , 2022, European Journal of Soil Science.

[2]  M. Hayden,et al.  Roots’ Drought Adaptive Traits in Crop Improvement , 2022, Plants.

[3]  A. Burgess Wine without water: Improving grapevine tolerance to drought , 2022, Plant physiology.

[4]  J. C. Herrera,et al.  Model-assisted ideotyping reveals trait syndromes to adapt viticulture to a drier climate , 2022, Plant physiology.

[5]  Claudia D. Volosciuk,et al.  Downscaling of climate change scenarios for a high resolution, site–specific assessment of drought stress risk for two viticultural regions with heterogeneous landscapes , 2021, Earth System Dynamics.

[6]  M. Friedel,et al.  Towards a Stochastic Model to Simulate Grapevine Architecture: A Case Study on Digitized Riesling Vines Considering Effects of Elevated CO2 , 2022, Plants.

[7]  P. de Reffye,et al.  Functional–Structural Plant Models Mission in Advancing Crop Science: Opportunities and Prospects , 2021, Frontiers in Plant Science.

[8]  T. Kuyper,et al.  Breeding Beyond Monoculture: Putting the “Intercrop” Into Crops , 2021, Frontiers in Plant Science.

[9]  A. McElrone,et al.  Root pressure-volume curve traits capture rootstock drought tolerance. , 2021, Annals of botany.

[10]  Corinne Le Quéré,et al.  Climate Change 2013: The Physical Science Basis , 2013 .

[11]  H. Brown,et al.  Developing perennial fruit crop models in APSIM Next Generation using grapevine as an example , 2021, in silico Plants.

[12]  Jan Vanderborght,et al.  Bayesian inference of root architectural model parameters from synthetic field data , 2021, Plant and Soil.

[13]  F. Cointault,et al.  In situ Phenotyping of Grapevine Root System Architecture by 2D or 3D Imaging: Advantages and Limits of Three Cultivation Methods , 2021, Frontiers in Plant Science.

[14]  P. Pérez-Rodríguez,et al.  Target Population of Environments for Wheat Breeding in India: Definition, Prediction and Genetic Gains , 2021, Frontiers in Plant Science.

[15]  R. Chakraborty,et al.  Specialized Plant Growth Chamber Designs to Study Complex Rhizosphere Interactions , 2021, Frontiers in Microbiology.

[16]  G. Hammer,et al.  Tackling G × E × M interactions to close on-farm yield-gaps: creating novel pathways for crop improvement by predicting contributions of genetics and management to crop productivity , 2021, Theoretical and Applied Genetics.

[17]  L. G. Santesteban,et al.  Cover crops in viticulture. A systematic review (1): Implications on soil characteristics and biodiversity in vineyard , 2021 .

[18]  Katja Herzog,et al.  High-resolution 3D phenotyping of the grapevine root system using X-ray Computed Tomography , 2021 .

[19]  Simone Mueller Loose,et al.  The cost disadvantage of steep slope viticulture and strategies for its preservation , 2021 .

[20]  J. Ruffault,et al.  SurEau: a mechanistic model of plant water relations under extreme drought , 2020, Annals of Forest Science.

[21]  H. Lesch,et al.  AUSWIRKUNGEN DES KLIMAWANDELS , 2021, Den Klimawandel verstehen.

[22]  L. Hossard,et al.  Evaluating Strategies for Adaptation to Climate Change in Grapevine Production–A Systematic Review , 2021, Frontiers in Plant Science.

[23]  J. C. Herrera,et al.  The physiology of drought stress in grapevine: towards an integrative definition of drought tolerance , 2020, Journal of experimental botany.

[24]  C. Gisbert,et al.  Evaluation of the genetic diversity and root architecture under osmotic stress of common grapevine rootstocks and clones , 2020, Scientia Horticulturae.

[25]  J. C. Herrera,et al.  The sequence and thresholds of leaf hydraulic traits underlying grapevine varietal differences in drought tolerance , 2020, Journal of experimental botany.

[26]  F. Barrios-Masias,et al.  Differences in grapevine rootstock sensitivity and recovery from drought are linked to fine root cortical lacunae and root tip function. , 2020, The New phytologist.

[27]  C. Kole,et al.  Genomic Designing of Climate-Smart Fruit Crops , 2020 .

[28]  S. Delrot,et al.  Genetic and Genomic Approaches for Adaptation of Grapevine to Climate Change , 2020 .

[29]  H. Vereecken,et al.  CPlantBox, a whole plant modelling framework for the simulation of water and carbon related processes , 2019, bioRxiv.

[30]  M. Friedel,et al.  Modelling Approach for Predicting the Impact of Changing Temperature Conditions on Grapevine Canopy Architectures , 2019, Agronomy.

[31]  V. Lauvergeat,et al.  Grapevine rootstocks differentially regulate root growth and architecture in response to nitrogen availability , 2019, Acta Horticulturae.

[32]  E. Gomès,et al.  Grapevine adaptation to abiotic stress: an overview , 2019, Acta Horticulturae.

[33]  A. Lakso,et al.  Scion–rootstock interactions influence the growth and behaviour of the grapevine root system in a heavy clay soil , 2019 .

[34]  Volker Schmidt,et al.  Statistical Characterization of the Root System Architecture Model CRootBox , 2019 .

[35]  Jay Lund,et al.  Lessons from California’s 2012–2016 Drought , 2018, Journal of Water Resources Planning and Management.

[36]  M. Schrön,et al.  Uncertainty, sensitivity and improvements in soil moisture estimation with cosmic-ray neutron sensing , 2018, Journal of Hydrology.

[37]  A. Nardini,et al.  Vineyard water relations in a karstic area: deep roots and irrigation management , 2018, Agriculture, Ecosystems & Environment.

[38]  C. Bastien,et al.  Phenomic Selection Is a Low-Cost and High-Throughput Method Based on Indirect Predictions: Proof of Concept on Wheat and Poplar , 2018, G3: Genes, Genomes, Genetics.

[39]  S. Delrot,et al.  Dissecting the rootstock control of scion transpiration using model-assisted analyses in grapevine , 2018, Tree physiology.

[40]  J. Lynch Rightsizing root phenotypes for drought resistance , 2018, Journal of experimental botany.

[41]  K. Yıldırım,et al.  Responses of grapevine rootstocks to drought through altered root system architecture and root transcriptomic regulations. , 2018, Plant physiology and biochemistry : PPB.

[42]  Hervé Rey,et al.  DigR: a generic model and its open source simulation software to mimic three-dimensional root-system architecture diversity , 2018, Annals of botany.

[43]  S. Delrot,et al.  A 3-D functional–structural grapevine model that couples the dynamics of water transport with leaf gas exchange , 2018, Annals of botany.

[44]  Jan Vanderborght,et al.  CRootBox: A structural-functional modelling framework for root systems , 2017, bioRxiv.

[45]  B. Holzapfel,et al.  Circadian regulation of grapevine root and shoot growth and their modulation by photoperiod and temperature. , 2018, Journal of plant physiology.

[46]  E. Baldi,et al.  Soil-applied phosphorous is an effective tool to mitigate the toxicity of copper excess on grapevine grown in rhizobox , 2018 .

[47]  S. Cookson,et al.  Genetic architecture of aerial and root traits in field-grown grafted grapevines is largely independent , 2018, Theoretical and Applied Genetics.

[48]  S. Delrot,et al.  Grapevine roots: the dark side , 2017 .

[49]  F. Tardieu,et al.  Root Water Uptake and Ideotypes of the Root System: Whole‐Plant Controls Matter , 2017 .

[50]  Michelle Watt,et al.  OpenSimRoot: widening the scope and application of root architectural models , 2017, The New phytologist.

[51]  H. Schultz Issues to be considered for strategic adaptation to climate evolution – is atmospheric evaporative demand changing? , 2017 .

[52]  Eric Lebon,et al.  Adapting plant material to face water stress in vineyards: which physiological targets for an optimal control of plant water status? , 2017 .

[53]  J. Swanepoel,et al.  The Influence of Rootstock on the Rooting Pattern of the Grapevine , 2017 .

[54]  M. Walker,et al.  Early Measures of Drought Tolerance in Four Grape Rootstocks , 2017 .

[55]  Helder Fraga,et al.  Modelling climate change impacts on viticultural yield, phenology and stress conditions in Europe , 2016, Global change biology.

[56]  Céline Meredieu,et al.  Anchorage failure of young trees in sandy soils is prevented by a rigid central part of the root system with various designs. , 2016, Annals of botany.

[57]  A. Strever,et al.  Grapevine roots: interaction with natural factors and agronomic practices , 2016 .

[58]  M. S. Grando,et al.  Methods to dissect grapevine rootstocks responses to drought stress , 2016 .

[59]  L. Kocsis,et al.  Grape rootstock-scion interaction on root system development , 2016 .

[60]  S. Cookson,et al.  Screening root morphology in grafted grapevine using 2D digital images from rhizotrons , 2016 .

[61]  N. Ollat,et al.  Grapevine rootstocks: origins and perspectives , 2016 .

[62]  N. Ollat,et al.  The influence of grapevine rootstocks on scion growth and drought resistance , 2016, Theoretical and Experimental Plant Physiology.

[63]  H. Schultz Global Climate Change, Sustainability, and Some Challenges for Grape and Wine Production* , 2016, Journal of Wine Economics.

[64]  C. Lovisolo,et al.  Grapevine adaptations to water stress: new perspectives about soil/plant interactions , 2016, Theoretical and Experimental Plant Physiology.

[65]  Carlos Lopes,et al.  Modern viticulture in southern Europe: Vulnerabilities and strategies for adaptation to water scarcity , 2016 .

[66]  Luca Ridolfi,et al.  Can diversity in root architecture explain plant water use efficiency? A modeling study , 2015, Ecological modelling.

[67]  F. Barrios-Masias,et al.  Differential responses of grapevine rootstocks to water stress are associated with adjustments in fine root hydraulic physiology and suberization. , 2015, Journal of experimental botany.

[68]  E. Gomès,et al.  Water limitation and rootstock genotype interact to alter grape berry metabolism through transcriptome reprogramming , 2015, Horticulture Research.

[69]  O. Löhnertz,et al.  Investigation of grapevine root distribution by in situ minirhizotron observation , 2015 .

[70]  Philip N Benfey,et al.  Regulation of plant root system architecture: implications for crop advancement. , 2015, Current opinion in biotechnology.

[71]  Frank Technow,et al.  Integrating Crop Growth Models with Whole Genome Prediction through Approximate Bayesian Computation , 2015, bioRxiv.

[72]  K. Chenu Characterising the crop environment – nature, significance and applications , 2015 .

[73]  Hans R. Schultz,et al.  Constructing a framework for risk analyses of climate change effects on the water budget of differently sloped vineyards with a numeric simulation using the Monte Carlo method coupled to a water balance model , 2014, Front. Plant Sci..

[74]  C. Bonghi,et al.  Grapevine rootstock effects on abiotic stress tolerance , 2014 .

[75]  L. Totir,et al.  Predicting the future of plant breeding: complementing empirical evaluation with genetic prediction , 2014, Crop and Pasture Science.

[76]  D. Tsegay,et al.  Responses of grapevine rootstocks to drought stress , 2014 .

[77]  C. Gary,et al.  A water stress index based on water balance modelling for discrimination of grapevine quality and yield , 2014 .

[78]  Alexia Stokes,et al.  Deep Phenotyping of Coarse Root Architecture in R. pseudoacacia Reveals That Tree Root System Plasticity Is Confined within Its Architectural Model , 2013, PloS one.

[79]  L. Comas,et al.  Root traits contributing to plant productivity under drought , 2013, Front. Plant Sci..

[80]  X. Draye,et al.  An online database for plant image analysis software tools , 2013, Plant Methods.

[81]  Peter J. Gregory,et al.  Matching roots to their environment. , 2013, Annals of botany.

[82]  P. Reich,et al.  New handbook for standardised measurement of plant functional traits worldwide , 2013 .

[83]  B. Timbal,et al.  The Millennium Drought in southeast Australia (2001–2009): Natural and human causes and implications for water resources, ecosystems, economy, and society , 2013 .

[84]  Hendrik Poorter,et al.  Pot size matters: a meta-analysis of the effects of rooting volume on plant growth. , 2012, Functional plant biology : FPB.

[85]  A. McElrone,et al.  The relationship between root hydraulics and scion vigour across Vitis rootstocks: what role do root aquaporins play? , 2012, Journal of experimental botany.

[86]  R. Richards,et al.  Traits and selection strategies to improve root systems and water uptake in water-limited wheat crops. , 2012, Journal of experimental botany.

[87]  H. Jones How do rootstocks control shoot water relations? , 2012, The New phytologist.

[88]  C. van Leeuwen,et al.  Rootstock control of scion transpiration and its acclimation to water deficit are controlled by different genes. , 2012, The New phytologist.

[89]  N. Brisson,et al.  CLIMATE CHANGE IMPACT ON FRENCH VINEYARDS AS PREDICTED BY MODELS , 2012 .

[90]  François Tardieu,et al.  Any trait or trait-related allele can confer drought tolerance: just design the right drought scenario. , 2012, Journal of experimental botany.

[91]  Herdina,et al.  Direct measurement of roots in soil for single and mixed species using a quantitative DNA-based method , 2011, Plant and Soil.

[92]  V. Singh,et al.  Drought modeling-A review , 2011 .

[93]  D. Richards The Grape Root System , 2011 .

[94]  D. Smart,et al.  Seasonal changes of whole root system conductance by a drought-tolerant grape root system , 2010, Journal of experimental botany.

[95]  Christian Gary,et al.  WaLIS--A simple model to simulate water partitioning in a crop association: The example of an intercropped vineyard , 2010 .

[96]  Peter J. Gregory,et al.  Root growth models: towards a new generation of continuous approaches. , 2010, Journal of experimental botany.

[97]  M. M. Chaves,et al.  Grapevine under deficit irrigation: hints from physiological and molecular data. , 2010, Annals of botany.

[98]  Daniel Leitner,et al.  A dynamic root system growth model based on L-Systems , 2010, Plant and Soil.

[99]  R. Savé,et al.  Grapevine Roots and Soil Environment: Growth, Distribution and Function , 2010 .

[100]  L. Comas,et al.  Biological and environmental factors controlling root dynamics and function: effects of root ageing and soil moisture , 2010 .

[101]  S. Cookson,et al.  Scion genotype controls biomass allocation and root development in grafted grapevine , 2009 .

[102]  M. Bindi,et al.  European winegrowers’ perceptions of climate change impact and options for adaptation , 2009 .

[103]  Christian Gary,et al.  Spatial and temporal changes to the water regime of a Mediterranean vineyard due to the adoption of cover cropping , 2008 .

[104]  D. Smart,et al.  Root foraging in response to heterogeneous soil moisture in two grapevines that differ in potential growth rate. , 2008, The New phytologist.

[105]  X. Draye,et al.  Root system architecture: opportunities and constraints for genetic improvement of crops. , 2007, Trends in plant science.

[106]  B. Loveys,et al.  The effect of changing patterns in soil‐moisture availability on grapevine root distribution, and viticultural implications for converting full‐cover irrigation into a point‐source irrigation system , 2007 .

[107]  Lisa Morano,et al.  Grapevine Rooting Patterns: A Comprehensive Analysis and a Review , 2006, American Journal of Enology and Viticulture.

[108]  M. M. Alsina,et al.  Effects of rootstock and irrigation regime on hydraulic architecture of Vitis vinifera L. Cv. Tempranillo , 2006 .

[109]  T. Fourcaud,et al.  Root architecture and wind-firmness of mature Pinus pinaster. , 2005, The New phytologist.

[110]  L. Comas,et al.  Canopy and environmental control of root dynamics in a long-term study of Concord grape. , 2005, The New phytologist.

[111]  Christophe Godin,et al.  Functional-structural plant modelling. , 2005, The New phytologist.

[112]  Vincent Dumas,et al.  Modelling the seasonal dynamics of the soil water balance of vineyards. , 2003, Functional plant biology : FPB.

[113]  L. Jorge,et al.  Grapevine root distribution in drip and microsprinkler irrigation , 2003 .

[114]  Senthold Asseng,et al.  An overview of APSIM, a model designed for farming systems simulation , 2003 .

[115]  R. Morlat,et al.  Grapevine Root System and Soil Characteristics in a Vineyard Maintained Long-term with or without Interrow Sward , 2003, American Journal of Enology and Viticulture.

[116]  M. Goddard,et al.  Prediction of total genetic value using genome-wide dense marker maps. , 2001, Genetics.

[117]  Godin,et al.  A multiscale model of plant topological structures , 1998, Journal of theoretical biology.

[118]  W. Kiefer,et al.  Ergebnisse von Wurzeluntersuchungen an Reben bei offenem und begrüntem Boden , 1994 .