Human Mutation

Meliha Karsak* | Konstantin Glebov* | Marina Scheffold | Thomas Bajaj | Amit Kawalia | Ilker Karaca | Sebastian Rading | Johannes Kornhuber | Oliver Peters | Monica Diez‐Fairen | Lutz Frölich | Michael Hüll | Jens Wiltfang | Martin Scherer | Steffi Riedel‐Heller | Anja Schneider | Michael T. Heneka | Klaus Fliessbach | Ahmed Sharaf | Holger Thiele | Martina Lennarz | Frank Jessen | Wolfgang Maier | Christian Kubisch | Zoya Ignatova | Peter Nürnberg | Pau Pastor | Jochen Walter | Alfredo Ramirez

[1]  A. Reuser,et al.  Recombinant human alpha-glucosidase from rabbit milk in Pompe patients. , 2000, Lancet.

[2]  M. Karsak,et al.  Cannabinoid receptor 2 expression modulates Gβ(1)γ(2) protein interaction with the activator of G protein signalling 2/dynein light chain protein Tctex-1. , 2016, Biochemical pharmacology.

[3]  Vladimir N Uversky,et al.  Intrinsic disorder in proteins associated with neurodegenerative diseases. , 2009, Frontiers in bioscience.

[4]  F. Endo,et al.  Improved assay for differential diagnosis between Pompe disease and acid α-glucosidase pseudodeficiency on dried blood spots. , 2011, Molecular genetics and metabolism.

[5]  A. Goate,et al.  Coding variants in TREM2 increase risk for Alzheimer's disease. , 2014, Human molecular genetics.

[6]  D. Güngör,et al.  How to describe the clinical spectrum in Pompe disease? , 2013, American journal of medical genetics. Part A.

[7]  H. Dyson,et al.  Intrinsically disordered proteins in cellular signalling and regulation , 2014, Nature Reviews Molecular Cell Biology.

[8]  W. Hop,et al.  Effect of enzyme therapy and prognostic factors in 69 adults with Pompe disease: an open-label single-center study , 2012, Orphanet Journal of Rare Diseases.

[9]  Markus Glatzel,et al.  The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases. , 2017, Immunity.

[10]  P. Laforêt,et al.  208th ENMC International Workshop: Formation of a European Network to develop a European data sharing model and treatment guidelines for Pompe disease Naarden, The Netherlands, 26–28 September 2014 , 2015, Neuromuscular Disorders.

[11]  S. Marie,et al.  Update of the pompe disease mutation database with 60 novel GAA sequence variants and additional studies on the functional effect of 34 previously reported variants , 2012, Human mutation.

[12]  J. Morris,et al.  The diagnosis of dementia due to Alzheimer’s disease: Recommendations from the National Institute on Aging-Alzheimer’s Association workgroups on diagnostic guidelines for Alzheimer's disease , 2011, Alzheimer's & Dementia.

[13]  W. Pijnappel,et al.  Alternative Splicing in Genetic Diseases: Improved Diagnosis and Novel Treatment Options. , 2017, International review of cell and molecular biology.

[14]  F. Jessen,et al.  Prediction of Dementia in Primary Care Patients , 2011, PloS one.

[15]  L. Peltonen,et al.  Transcript profiles of dendritic cells of PLOSL patients link demyelinating CNS disorders with abnormalities in pathways of actin bundling and immune response , 2007, Journal of Molecular Medicine.

[16]  V. Uversky Intrinsically disordered proteins and their (disordered) proteomes in neurodegenerative disorders , 2015, Front. Aging Neurosci..

[17]  H. Neumann,et al.  Clearance of apoptotic neurons without inflammation by microglial triggering receptor expressed on myeloid cells-2 , 2005, The Journal of experimental medicine.

[18]  Ulrich Lang,et al.  Leveraging the Power of High Performance Computing for Next Generation Sequencing Data Analysis: Tricks and Twists from a High Throughput Exome Workflow , 2015, PloS one.

[19]  A. Pestronk,et al.  A randomized study of alglucosidase alfa in late-onset Pompe's disease. , 2010, The New England journal of medicine.

[20]  Raymond Dalgleish,et al.  HGVS Recommendations for the Description of Sequence Variants: 2016 Update , 2016, Human mutation.

[21]  A. Goate,et al.  Alzheimer’s Disease Risk Genes and Mechanisms of Disease Pathogenesis , 2015, Biological Psychiatry.

[22]  D. Swallow,et al.  An investigation of the properties and possible clinical significance of the lysosomal α‐glucosidase GAA * 2 allele , 1989, Annals of human genetics.

[23]  F. Jessen,et al.  Early and Differential Diagnosis of Dementia and Mild Cognitive Impairment , 2009, Dementia and Geriatric Cognitive Disorders.

[24]  N. C. van de Merbel,et al.  High Sustained Antibody Titers in Patients with Classic Infantile Pompe Disease Following Immunomodulation at Start of Enzyme Replacement Therapy , 2018, The Journal of pediatrics.

[25]  F. Aarsen,et al.  Classic infantile Pompe patients approaching adulthood: a cohort study on consequences for the brain , 2018, Developmental medicine and child neurology.

[26]  E. Ziętkiewicz,et al.  Translational readthrough potential of natural termination codons in eucaryotes – The impact of RNA sequence , 2015, RNA biology.

[27]  J. Clancy,et al.  Early Treatment With Alglucosidase Alfa Prolongs Long-Term Survival of Infants With Pompe Disease , 2009, Pediatric Research.

[28]  A. Colver Quality of life and participation , 2009, Developmental medicine and child neurology.

[29]  D. Stockton,et al.  Efficacy, safety profile, and immunogenicity of alglucosidase alfa produced at the 4,000-liter scale in US children and adolescents with Pompe disease: ADVANCE, a phase IV, open-label, prospective study , 2018, Genetics in Medicine.

[30]  C. Haass,et al.  A Structural Switch of Presenilin 1 by Glycogen Synthase Kinase 3β-mediated Phosphorylation Regulates the Interaction with β-Catenin and Its Nuclear Signaling* , 2007, Journal of Biological Chemistry.

[31]  W. Pijnappel,et al.  Extension of the Pompe mutation database by linking disease‐associated variants to clinical severity , 2019, Human mutation.

[32]  D. Halley,et al.  Update of the Pompe disease mutation database with 107 sequence variants and a format for severity rating , 2008, Human mutation.

[33]  R. Redon,et al.  Contribution to Alzheimer's disease risk of rare variants in TREM2, SORL1, and ABCA7 in 1779 cases and 1273 controls , 2017, Neurobiology of Aging.

[34]  D. Holtzman,et al.  Interplay between innate immunity and Alzheimer disease: APOE and TREM2 in the spotlight , 2018, Nature Reviews Immunology.

[35]  M. Kay,et al.  Rescue of Pompe disease in mice by AAV-mediated liver delivery of secretable acid α-glucosidase , 2017, Science Translational Medicine.

[36]  J. Shea,et al.  Regulation and aggregation of intrinsically disordered peptides , 2015, Proceedings of the National Academy of Sciences.

[37]  R. Wevers,et al.  p.[G576S; E689K]: pathogenic combination or polymorphism in Pompe disease? , 2008, European Journal of Human Genetics.

[38]  J. E. Wraith,et al.  Treatment of infantile Pompe disease with alglucosidase alpha: the UK experience , 2010, Journal of Inherited Metabolic Disease.

[39]  L. Fratiglioni,et al.  Role of genes and environments for explaining Alzheimer disease. , 2006, Archives of general psychiatry.

[40]  L. Peltonen,et al.  Dap12 and Trem2, molecules involved in innate immunity and neurodegeneration, are co-expressed in the CNS , 2005, Neurobiology of Disease.

[41]  S. Brooks,et al.  A de novo 13 nt deletion, a newly identified C647W missense mutation and a deletion of exon 18 in infantile onset glycogen storage disease type II (GSDII). , 1994, Human molecular genetics.

[42]  M. Nöthen,et al.  SUCLG 2 identified as both a determinator of CSF A b 1 – 42 levels and an attenuator of cognitive decline in Alzheimer ’ s disease , 2014 .

[43]  A. T. van der Ploeg,et al.  Effects of a higher dose of alglucosidase alfa on ventilator-free survival and motor outcome in classic infantile Pompe disease: an open-label single-center study , 2016, Journal of Inherited Metabolic Disease.

[44]  B. Byrne,et al.  B-Cell depletion and immunomodulation before initiation of enzyme replacement therapy blocks the immune response to acid alpha-glucosidase in infantile-onset Pompe disease. , 2013, The Journal of pediatrics.

[45]  S. Kang,et al.  Disease‐Associated Mutations of TREM2 Alter the Processing of N‐Linked Oligosaccharides in the Golgi Apparatus , 2015, Traffic.

[46]  F. Glocker,et al.  Enzyme replacement therapy with alglucosidase alfa in 44 patients with late-onset glycogen storage disease type 2: 12-month results of an observational clinical trial , 2009, Journal of Neurology.

[47]  M. Araúzo-Bravo,et al.  GAA Deficiency in Pompe Disease Is Alleviated by Exon Inclusion in iPSC-Derived Skeletal Muscle Cells , 2017, Molecular therapy. Nucleic acids.

[48]  W. Pijnappel,et al.  Antisense Oligonucleotides Promote Exon Inclusion and Correct the Common c.-32-13T>G GAA Splicing Variant in Pompe Disease , 2017, Molecular therapy. Nucleic acids.

[49]  C. Haass,et al.  An Alzheimer‐associated TREM2 variant occurs at the ADAM cleavage site and affects shedding and phagocytic function , 2017, EMBO molecular medicine.

[50]  D. Halley,et al.  Identification and Characterization of Aberrant GAA Pre‐mRNA Splicing in Pompe Disease Using a Generic Approach , 2015, Human mutation.

[51]  H. van Crevel [Diagnosis in dementia]. , 1987, Nederlandsch tijdschrift voor geneeskunde.

[52]  J. Walter The Triggering Receptor Expressed on Myeloid Cells 2: A Molecular Link of Neuroinflammation and Neurodegenerative Diseases* , 2015, The Journal of Biological Chemistry.

[53]  L. Hoefsloot,et al.  Segmental and total uniparental isodisomy (UPiD) as a disease mechanism in autosomal recessive lysosomal disorders: evidence from SNP arrays , 2019, European Journal of Human Genetics.

[54]  T. Frebourg,et al.  Exonic Splicing Mutations Are More Prevalent than Currently Estimated and Can Be Predicted by Using In Silico Tools , 2016, PLoS genetics.

[55]  C. Cruchaga,et al.  TREM2 is associated with the risk of Alzheimer's disease in Spanish population , 2013, Neurobiology of Aging.

[56]  F. Glocker,et al.  36 months observational clinical study of 38 adult Pompe disease patients under alglucosidase alfa enzyme replacement therapy , 2012, Journal of Inherited Metabolic Disease.

[57]  David V. Hansen,et al.  TREM2, Microglia, and Neurodegenerative Diseases. , 2017, Trends in molecular medicine.

[58]  K. Coggeshall,et al.  TREM 2-and DAP 12-Dependent Activation of PI 3 K Requires DAP 10 and Is Inhibited by SHIP 1 , 2010 .

[59]  Tin Wee Tan,et al.  SPdb – a signal peptide database , 2005, BMC Bioinformatics.

[60]  Kevin W Eliceiri,et al.  NIH Image to ImageJ: 25 years of image analysis , 2012, Nature Methods.

[61]  J. Molinuevo,et al.  TREM2 mutations implicated in neurodegeneration impair cell surface transport and phagocytosis , 2014, Science Translational Medicine.

[62]  J. ByrneBarry,et al.  Safety of Intradiaphragmatic Delivery of Adeno-Associated Virus-Mediated Alpha-Glucosidase (rAAV1-CMV-hGAA) Gene Therapy in Children Affected by Pompe Disease , 2017 .

[63]  L. Peltonen,et al.  DAP12/TREM2 Deficiency Results in Impaired Osteoclast Differentiation and Osteoporotic Features , 2003, The Journal of experimental medicine.

[64]  F. Jessen,et al.  A rare heterozygous TREM2 coding variant identified in familial clustering of dementia affects an intrinsically disordered protein region and function of TREM2 , 2019, Human mutation.

[65]  M. Willart,et al.  Lentiviral gene therapy of murine hematopoietic stem cells ameliorates the Pompe disease phenotype. , 2010, Blood.

[66]  P. Tompa,et al.  Introducing protein intrinsic disorder. , 2014, Chemical reviews.

[67]  A. Broomfield,et al.  Response of 33 UK patients with infantile-onset Pompe disease to enzyme replacement therapy , 2016, Journal of Inherited Metabolic Disease.

[68]  D. Rizopoulos,et al.  Quality of life and participation in daily life of adults with Pompe disease receiving enzyme replacement therapy: 10 years of international follow-up , 2015, Journal of Inherited Metabolic Disease.

[69]  M. Folstein,et al.  Clinical diagnosis of Alzheimer's disease: Report of the NINCDS—ADRDA Work Group under the auspices of Department of Health and Human Services Task Force on Alzheimer's Disease , 2011, Neurology.

[70]  A. Rosenberg,et al.  Elimination of antibodies to recombinant enzyme in Pompe's disease. , 2009, The New England journal of medicine.

[71]  H. Neumann,et al.  Sequential Proteolytic Processing of the Triggering Receptor Expressed on Myeloid Cells-2 (TREM2) Protein by Ectodomain Shedding and γ-Secretase-dependent Intramembranous Cleavage* , 2013, The Journal of Biological Chemistry.

[72]  M. Moracci,et al.  Structure of human lysosomal acid α-glucosidase–a guide for the treatment of Pompe disease , 2017, Nature Communications.

[73]  J. Walter,et al.  Functional involvement of γ-secretase in signaling of the triggering receptor expressed on myeloid cells-2 (TREM2) , 2016, Journal of Neuroinflammation.

[74]  Tianning Liui,et al.  The role of TREM 2 R 47 H as a risk factor for Alzheimer ’ s disease , frontotemporal lobar degeneration , amyotrophic lateral sclerosis , and Parkinson ’ s disease , 2015 .

[75]  J. Hardy,et al.  Microglial genes regulating neuroinflammation in the progression of Alzheimer's disease , 2016, Current Opinion in Neurobiology.

[76]  B. Bembi,et al.  Functional characterization of the common c.-32-13T>G mutation of GAA gene: identification of potential therapeutic agents , 2013, Nucleic acids research.

[77]  C. Boerkoel,et al.  Leaky splicing mutation in the acid maltase gene is associated with delayed onset of glycogenosis type II. , 1995, American journal of human genetics.

[78]  Benjamin J. Raphael,et al.  Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes , 2011, Proceedings of the National Academy of Sciences.

[79]  T. Conlon,et al.  Safety of Intradiaphragmatic Delivery of Adeno-Associated Virus-Mediated Alpha-Glucosidase (rAAV1-CMV-hGAA) Gene Therapy in Children Affected by Pompe Disease. , 2017, Human gene therapy. Clinical development.

[80]  P. Riederer,et al.  Consensus Paper of the WFSBP Task Force on Biological Markers of Dementia: The role of CSF and blood analysis in the early and differential diagnosis of dementia , 2005, The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry.

[81]  Sonia Longhi,et al.  Assessing protein disorder and induced folding , 2005, Proteins.

[82]  D. Orlikowski,et al.  Effect of enzyme replacement therapy with alglucosidase alfa (Myozyme®) in 12 patients with advanced late-onset Pompe disease. , 2016, Molecular genetics and metabolism.

[83]  A. Reuser,et al.  Enzyme analysis for Pompe disease in leukocytes; superior results with natural substrate compared with artificial substrates , 2009, Journal of Inherited Metabolic Disease.

[84]  D. Dimmock,et al.  Successful immune tolerance induction to enzyme replacement therapy in CRIM-negative infantile Pompe disease , 2012, Genetics in Medicine.

[85]  M. Colonna,et al.  TREM2 sustains microglial expansion during aging and response to demyelination. , 2015, The Journal of clinical investigation.

[86]  Nick C Fox,et al.  Rare coding variants in PLCG2, ABI3, and TREM2 implicate microglial-mediated innate immunity in Alzheimer's disease , 2017, Nature Genetics.

[87]  P. Nürnberg,et al.  Late diagnosis of a truncating WISP3 mutation entails a severe phenotype of progressive pseudorheumatoid dysplasia , 2018, Cold Spring Harbor molecular case studies.

[88]  J. Jaeken,et al.  Effect of enzyme therapy in juvenile patients with Pompe disease: A three-year open-label study , 2010, Neuromuscular Disorders.

[89]  R. Guerreiro,et al.  A novel compound heterozygous mutation in TREM2 found in a Turkish frontotemporal dementia-like family , 2013, Neurobiology of Aging.

[90]  D. Rujescu,et al.  The role of TREM2 R47H as a risk factor for Alzheimer's disease, frontotemporal lobar degeneration, amyotrophic lateral sclerosis, and Parkinson's disease , 2015, Alzheimer's & Dementia.

[91]  H. Mandel,et al.  Cross-reactive immunologic material status affects treatment outcomes in Pompe disease infants. , 2010, Molecular genetics and metabolism.