Microbial community composition and function across an arctic tundra landscape.

Arctic landscapes are characterized by a diversity of ecosystems, which differ in plant species composition, litter biochemistry, and biogeochemical cycling rates. Tundra ecosystems differing in plant composition should contain compositionally and functionally distinct microbial communities that differentially transform dissolved organic matter as it moves downslope from dry, upland to wet, lowland tundra. To test this idea, we studied soil microbial communities in upland tussock, stream-side birch-willow, and lakeside wet sedge tundra in arctic Alaska, USA. These are a series of ecosystems that differ in topographic position, plant composition, and soil drainage. Phospholipid fatty acid (PLFA) analyses, coupled with compound-specific 13C isotope tracing, were used to quantify microbial community composition and function; we also assayed the activity of extracellular enzymes involved in cellulose, chitin, and lignin degradation. Surface soil from each tundra ecosystem was labeled with 13C-cellobiose,13C-N-acetylglucosamine, or 13C-vanillin. After a five-day incubation, we followed the movement of 13C into bacterial and fungal PLFAs, microbial respiration, dissolved organic carbon, and soil organic matter. Microbial community composition and function were distinct among tundra ecosystems, with tussock tundra containing a significantly greater abundance and activity of soil fungi. Although the majority of 13C-labeled substrates rapidly moved into soil organic matter in all tundra soils (i.e., 50-90% of applied 13C), microbial respiration of labeled substrates in wet sedge tundra soil was lower than in tussock and birch-willow tundra; approximately 8% of 13C-cellobiose and approximately 5% of 13C-vanillin was respired in wet sedge soil vs. 26-38% of 13C-cellobiose and 18-21% of 13C-vanillin in the other tundra ecosystems. Despite these differences, wet sedge tundra exhibited the greatest extracellular enzyme activity. Topographic variation in plant litter biochemistry and soil drainage shape the metabolic capability of soil microbial communities, which, in turn, influence the chemical composition of dissolved organic matter across the arctic tundra landscape.

[1]  M. Waldrop,et al.  Microbial community response to nitrogen deposition in northern forest ecosystems , 2004 .

[2]  K. Pregitzer,et al.  Atmospheric nitrate deposition and the microbial degradation of cellobiose and vanillin in a northern hardwood forest , 2004 .

[3]  K. Nadelhoffer,et al.  Fine root production and nutrient content in wet and moist arctic tundras as influenced by chronic fertilization , 2002, Plant and Soil.

[4]  W. Zimmermann,et al.  Identification of extracellular proteins from actinomycetes responsible for the solubilisation of lignocellulose , 1988, Applied Microbiology and Biotechnology.

[5]  I. Burke,et al.  Microbial Community Composition across the Great Plains , 2004 .

[6]  K. Judd Dissolved organic matter dynamics in an Arctic catchment: Linking DOM chemistry, bioavailability, and microbial community composition. , 2004 .

[7]  L. Schipper,et al.  Pasture and forest soil microbial communities show distinct patterns in their catabolic respiration responses at a landscape scale , 2004 .

[8]  D. White,et al.  Determination of the sedimentary microbial biomass by extractible lipid phosphate , 2004, Oecologia.

[9]  Christopher W. Schadt,et al.  Seasonal Dynamics of Previously Unknown Fungal Lineages in Tundra Soils , 2003, Science.

[10]  Y. Hayashi,et al.  Enzymological characterization of EpoA, a laccase-like phenol oxidase produced by Streptomyces griseus. , 2003, Journal of biochemistry.

[11]  Gilles St-Jean,et al.  Automated quantitative and isotopic (13C) analysis of dissolved inorganic carbon and dissolved organic carbon in continuous-flow using a total organic carbon analyser. , 2003, Rapid communications in mass spectrometry : RCM.

[12]  G. Kling,et al.  Production and export of dissolved C in arctic tundra mesocosms: the roles of vegetation and water flow , 2002 .

[13]  D. Hooper,et al.  Vegetation and climate controls on potential CO2, DOC and DON production in northern latitude soils , 2002 .

[14]  Manuela M. Pereira,et al.  Molecular and Biochemical Characterization of a Highly Stable Bacterial Laccase That Occurs as a Structural Component of theBacillus subtilis Endospore Coat* , 2002, The Journal of Biological Chemistry.

[15]  R. Phillips,et al.  Microbial community composition and function beneath temperate trees exposed to elevated atmospheric carbon dioxide and ozone , 2002, Oecologia.

[16]  C. Schadt,et al.  Changes in Soil Microbial Community Structure and Function in an Alpine Dry Meadow Following Spring Snow Melt , 2002, Microbial Ecology.

[17]  A. Danchin,et al.  CotA of Bacillus subtilis Is a Copper-Dependent Laccase , 2001, Journal of bacteriology.

[18]  J. Nagy,et al.  Seasonal and annual variability in the quality of important forage plants on Banks Island, Canadian High Arctic , 2001 .

[19]  D. White,et al.  Landscape‐Level Patterns of Microbial Community Composition and Substrate Use in Upland Forest Ecosystems , 2001 .

[20]  L. Voesenek,et al.  Changes in growth, porosity, and radial oxygen loss from adventitious roots of selected mono‐ and dicotyledonous wetland species with contrasting types of aerenchyma , 2000 .

[21]  G. Kling,et al.  Integration of lakes and streams in a landscape perspective: the importance of material processing on spatial patterns and temporal coherence , 2000 .

[22]  M. H. Jones,et al.  Annual CO2 Flux in Dry and Moist Arctic Tundra: Field Responses to Increases in Summer Temperatures and Winter Snow Depth , 2000 .

[23]  J. Welker,et al.  Wintertime CO2 efflux from Arctic soils: Implications for annual carbon budgets , 1999 .

[24]  C. Robinson,et al.  Decomposition of root mixtures from high arctic plants : a microcosm study , 1999 .

[25]  R. Monson,et al.  LINKS BETWEEN MICROBIAL POPULATION DYNAMICS AND NITROGEN AVAILABILITY IN AN ALPINE ECOSYSTEM , 1999 .

[26]  M. H. Jones,et al.  Early and Late Winter CO2 Efflux from Arctic Tundra in the Kuparuk River Watershed, Alaska, U.S.A. , 1999 .

[27]  G. Kling,et al.  The character and bioactivity of dissolved organic matter at thaw and in the spring runoff waters of the arctic tundra North Slope, Alaska , 1998 .

[28]  M. H. Jones,et al.  Winter and early spring CO2 efflux from tundra communities of northern Alaska , 1998 .

[29]  J. Tenhunen,et al.  Soil nitrogen, microbial biomass, and respiration along an arctic toposequence , 1998 .

[30]  S. Hobbie Temperature and plant species control over litter decomposition in Alaskan tundra , 1996 .

[31]  J. Schimel Plant transport and methane production as controls on methane flux from arctic wet meadow tundra , 1995 .

[32]  K. Nadelhoffer,et al.  EFFECTS OF TEMPERATURE AND SUBSTRATE QUALITY ON ELEMENT MINERALIZATION IN SIX ARCTIC SOILS , 1991 .

[33]  F. Chapin,et al.  Production: Biomass Relationships and Element Cycling in Contrasting Arctic Vegetation Types , 1991 .

[34]  K. Nadelhoffer,et al.  Biogeochemical Diversity Along a Riverside Toposequence in Arctic Alaska , 1991 .

[35]  K. Nadelhoffer,et al.  Biogeochemical diversity and element transport in a heterogeneous landscape, the north slope of Alaska , 1991 .

[36]  W. Reeburgh,et al.  A methane flux transect along the trans-Alaska pipeline haul road , 1990 .

[37]  D. Crawford Lignocellulose decomposition by selected streptomyces strains , 1978, Applied and environmental microbiology.

[38]  Thomas M. Mc Calla,et al.  Introduction to Soil Microbiology, Second Edition , 1978 .

[39]  M. Alexander,et al.  Introduction to Soil Microbiology , 1962 .