The handbook of plant metabolomics

Preface CENTRAL METABOLISM Metabolic profiling of plants by GC-MS (Camilla B. Hill, Ute Roessner) Isotopologue profiling: towards a better understanding of metabolic pathways (Wolfgang Eisenreich, Claudia Huber, Erika Kutzner, Nihat Knispel, Nicholas Schramek) Nuclear magnetic resonance spectroscopy for plant metabolite profiling (Sonia van der Sar, Hye Kyong Kim, Axel Meissner, Robert Verpoorte, Young Hae Choi) Comprehensive two-dimensional gas chromatography for metabolomics (Katja Dettmer, Martin F. Almstetter, Christian J. Wachsmuth and Peter J. Oefner) MALDI mass spectrometric imaging of plants (Ales Svatos, Hans-Peter Mock) Medicago truncatula root and shoot Metabolomics: Protocol for the investigation of the primary carbon and nitrogen metabolism based on GC-MS (Vlora Mehmeti, Lena Fragner, Stefanie Wienkoop) SECONDARY AND LIPID METABOLISM Study of the volatile metabolome in plant-insect interactions (Georg J.F. Weingart, Nora C. Lawo, Astrid Forneck, Rudolf Krska, Rainer Schuhmacher) Metabolomics in Herbal Medicine Research (Lie-Fen Shyur, Chiu-Ping Liu, Shih-Chang Chien) Integrative analysis of secondary metabolism and transcript regulation in Arabidopsis Thaliana (Fumio Matsuda, Kazuki Saito) Liquid chromatography mass spectrometry analysis of flavonoids (Maciej Stobiecki, Piotr Kachlicki) GC/MS based lipidomics (Takeshi Furuhashi, Wolfram Weckwerth) Multi-gene transformation for pathway engineering of secondary metabolites (Hideyuki Suzuki, Eiji Takita, Kiyoshi Ohyama, Satoru Sawai, Hikaru Seki, Nozomu Sakurai, Toshiya Muranaka, Masao Ishimoto, Hiroshi Sudo, Kazuki Saito, Daisuke Shibata) METABOLOMICS AND GENOMICS Metabolomics Assisted Plant Breeding (Alexander Herrmann, Nicolas Schauer) Conducting Genome Wide Association Mapping of Metabolites (Susanna Atwell, Daniel J. Kliebenstein) METABOLOMICS AND BIOINFORMATICS Metabolite clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps (Alexander Kaever, Manuel Landesfeind, Kirstin Feussner, Ivo Feussner, Peter Meinicke) Metabolite identification and computational mass spectrometry (Steffen Neumann, Florian Rasche, Sebastian Wolf, Sebastian Bocker) COVAIN - a metabolomics data mining toolbox (Xiaoliang Sun, Wolfram Weckwerth) Mass Spectral Search and Analysis using the Golm Metabolome Database (Jan Hummel, Nadine Strehmel, Christian Bolling, Stefanie Schmidt, Dirk Walther, Joachim Kopka) Glossary Index