Transcriptomic responses of bat cells to European bat lyssavirus 1 infection under conditions simulating euthermia and hibernation

[1]  E. Holmes,et al.  Zoonotic disease and virome diversity in bats , 2021, Current Opinion in Virology.

[2]  D. Seilhean,et al.  First case of lethal encephalitis in Western Europe due to European bat lyssavirus type 1. , 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[3]  K. Storey,et al.  Markers of tissue remodeling and inflammation in the white and brown adipose tissues of a model hibernator. , 2021, Cellular signalling.

[4]  T. Kokurewicz,et al.  Associating physiological functions with genomic variability in hibernating bats , 2021, Evolutionary Ecology.

[5]  M. Regan,et al.  How the gut and liver hibernate. , 2020, Comparative biochemistry and physiology. Part A, Molecular & integrative physiology.

[6]  M. Munir,et al.  Fundamental Characteristics of Bat Interferon Systems , 2020, Frontiers in Cellular and Infection Microbiology.

[7]  T. Kuiken,et al.  Experimental Lagos bat virus infection in straw-colored fruit bats: A suitable model for bat rabies in a natural reservoir species , 2020, PLoS neglected tropical diseases.

[8]  T. Kokurewicz,et al.  Active surveillance for antibodies confirms circulation of lyssaviruses in Palearctic bats , 2020, BMC Veterinary Research.

[9]  P. Zhou,et al.  Interferon Regulatory Factors IRF1 and IRF7 Directly Regulate Gene Expression in Bats in Response to Viral Infection , 2020, Cell Reports.

[10]  A. Schuh,et al.  Asymptomatic Infection of Marburg Virus Reservoir Bats Is Explained by a Strategy of Immunoprotective Disease Tolerance , 2020, Current Biology.

[11]  J. Serra-Cobo,et al.  Circumstances of Human–Bat interactions and risk of lyssavirus transmission in metropolitan France , 2020, Zoonoses and public health.

[12]  C. Davy,et al.  Transcriptional host–pathogen responses of Pseudogymnoascus destructans and three species of bats with white-nose syndrome , 2020, Virulence.

[13]  R. Métras,et al.  Co‐circulation and characterization of novel African arboviruses (genus Ephemerovirus) in cattle, Mayotte island, Indian Ocean, 2017 , 2019, Transboundary and emerging diseases.

[14]  K. Itahana,et al.  High basal heat-shock protein expression in bats confers resistance to cellular heat/oxidative stress , 2019, Cell Stress and Chaperones.

[15]  K. Jepsen,et al.  TCF1 and LEF1 Control Treg Competitive Survival and Tfr Development to Prevent Autoimmune Diseases , 2019, Cell reports.

[16]  A. Chawla,et al.  Energetic Trade-Offs and Hypometabolic States Promote Disease Tolerance , 2019, Cell.

[17]  F. Ginhoux,et al.  Dampened NLRP3-mediated inflammation in bats and implications for a special viral reservoir host , 2019, Nature Microbiology.

[18]  V. Colizza,et al.  Mechanisms for lyssavirus persistence in non-synanthropic bats in Europe: insights from a modeling study , 2019, Scientific Reports.

[19]  C. Voigt,et al.  Immune response of hibernating European bats to a fungal challenge , 2019, Biology Open.

[20]  V. Misra,et al.  Arousal from hibernation and reactivation of Eptesicus fuscus gammaherpesvirus (EfHV) in big brown bats , 2018, Transboundary and emerging diseases.

[21]  F. Mutinelli,et al.  Active and passive surveillance for bat lyssaviruses in Italy revealed serological evidence for their circulation in three bat species , 2018, Epidemiology and Infection.

[22]  A. Zahradníková,et al.  Hibernation temperature-dependent Pseudogymnoascus destructans infection intensity in Palearctic bats , 2018, Virulence.

[23]  O. Ribeiro,et al.  Street rabies virus strains associated with insectivorous bats are less pathogenic than strains isolated from other reservoirs , 2018, Antiviral research.

[24]  N. Krešić,et al.  Molecular and serological survey of lyssaviruses in Croatian bat populations , 2018, BMC Veterinary Research.

[25]  P. Sosík,et al.  Natural selection in bats with historical exposure to white-nose syndrome , 2018, BMC Zoology.

[26]  D. Reeder,et al.  Effect of torpor on host transcriptomic responses to a fungal pathogen in hibernating bats , 2018, Molecular ecology.

[27]  P. Zhou,et al.  Dampened STING-Dependent Interferon Activation in Bats , 2018, Cell Host & Microbe.

[28]  M. Mar Albà,et al.  Transcriptomics in the wild: Hibernation physiology in free‐ranging dwarf lemurs , 2018, Molecular ecology.

[29]  F. Geiser,et al.  Cold-hearted bats: uncoupling of heart rate and metabolism during torpor at sub-zero temperatures , 2018, Journal of Experimental Biology.

[30]  P. Lemey,et al.  Host Genetic Variation Does Not Determine Spatio-Temporal Patterns of European Bat 1 Lyssavirus , 2017, Genome biology and evolution.

[31]  O. Gimenez,et al.  Longitudinal survey of two serotine bat (Eptesicus serotinus) maternity colonies exposed to EBLV-1 (European Bat Lyssavirus type 1): Assessment of survival and serological status variations using capture-recapture models , 2017, PLoS neglected tropical diseases.

[32]  Thomas Cokelaer,et al.  'Sequana': a Set of Snakemake NGS pipelines , 2017, J. Open Source Softw..

[33]  Olivia Doppelt-Azeroual,et al.  A public Galaxy platform at Pasteur used as an execution engine for web services , 2017 .

[34]  S. Finke,et al.  Comparative analysis of European bat lyssavirus 1 pathogenicity in the mouse model , 2017, PLoS neglected tropical diseases.

[35]  V. Misra,et al.  Lack of inflammatory gene expression in bats: a unique role for a transcription repressor , 2017, Scientific Reports.

[36]  Björn Grüning,et al.  ReGaTE: Registration of Galaxy Tools in Elixir , 2017, GigaScience.

[37]  L. Stein,et al.  Reactome pathway analysis: a high-performance in-memory approach , 2017, BMC Bioinformatics.

[38]  R. Sachidanandam,et al.  Innate Immune Responses of Bat and Human Cells to Filoviruses: Commonalities and Distinctions , 2017, Journal of Virology.

[39]  F. Ginhoux,et al.  Phenotypic and functional characterization of the major lymphocyte populations in the fruit-eating bat Pteropus alecto , 2016, Scientific Reports.

[40]  C. Voigt,et al.  Adaptive evolution of virus-sensing toll-like receptor 8 in bats , 2016, Immunogenetics.

[41]  P. Zhou,et al.  Contraction of the type I IFN locus and unusual constitutive expression of IFN-α in bats , 2016, Proceedings of the National Academy of Sciences.

[42]  D. Reeder,et al.  The White-Nose Syndrome Transcriptome: Activation of Anti-fungal Host Responses in Wing Tissue of Hibernating Little Brown Myotis , 2015, PLoS pathogens.

[43]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[44]  Yaqing Zhu,et al.  Establishment of Myotis myotis Cell Lines - Model for Investigation of Host-Pathogen Interaction in a Natural Host for Emerging Viruses , 2014, PloS one.

[45]  Shuyi Zhang,et al.  Comparison of Brain Transcriptome of the Greater Horseshoe Bats (Rhinolophus ferrumequinum) in Active and Torpid Episodes , 2014, PloS one.

[46]  N. Johnson,et al.  Differential chemokine responses in the murine brain following lyssavirus infection. , 2013, Journal of comparative pathology.

[47]  Wei Shi,et al.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features , 2013, Bioinform..

[48]  Lijun Wu,et al.  Comparative Analysis of Bat Genomes Provides Insight into the Evolution of Flight and Immunity , 2013, Science.

[49]  Marcel Martin Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .

[50]  Hannah V Carey,et al.  Hibernation: the immune system at rest? , 2010, Journal of leukocyte biology.

[51]  G. McCracken,et al.  Host immunity to repeated rabies virus infection in big brown bats , 2010, The Journal of general virology.

[52]  A. Cope,et al.  Themis2/ICB1 Is a Signaling Scaffold That Selectively Regulates Macrophage Toll-Like Receptor Signaling and Cytokine Production , 2010, PloS one.

[53]  N. Tordo,et al.  Experimental infection of serotine bats (Eptesicus serotinus) with European bat lyssavirus type 1a. , 2009, The Journal of general virology.

[54]  N. Johnson,et al.  Comparative pathological study of the murine brain after experimental infection with classical rabies virus and European bat lyssaviruses. , 2009, Journal of comparative pathology.

[55]  I. Capek,et al.  European Bat Lyssavirus Transmission among Cats, Europe , 2009, Emerging infectious diseases.

[56]  N. Johnson,et al.  Susceptibility of North American big brown bats (Eptesicus fuscus) to infection with European bat lyssavirus type 1. , 2008, The Journal of general virology.

[57]  Olivier Delmas,et al.  Genomic Diversity and Evolution of the Lyssaviruses , 2008, PloS one.

[58]  J. Serra-Cobo,et al.  Temporal Dynamics of European Bat Lyssavirus Type 1 and Survival of Myotis myotis Bats in Natural Colonies , 2007, PloS one.

[59]  R. Rudd,et al.  Effects of aerosolized rabies virus exposure on bats and mice. , 2007, The Journal of infectious diseases.

[60]  H. Field,et al.  Bats: Important Reservoir Hosts of Emerging Viruses , 2006, Clinical Microbiology Reviews.

[61]  A. Fooks,et al.  Natural and experimental infection of sheep with European bat lyssavirus type-1 of Danish bat origin. , 2006, Journal of comparative pathology.

[62]  Yuhuan Wang,et al.  Attenuated Rabies Virus Activates, while Pathogenic Rabies Virus Evades, the Host Innate Immune Responses in the Central Nervous System , 2005, Journal of Virology.

[63]  N. Johnson,et al.  Spill-over of European bat lyssavirus type 1 into a stone marten (Martes foina) in Germany. , 2004, Journal of veterinary medicine. B, Infectious diseases and veterinary public health.

[64]  F. Speleman,et al.  Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes , 2002, Genome Biology.

[65]  J. Serra-Cobo,et al.  European Bat Lyssavirus Infection in Spanish Bat Populations , 2002, Emerging infectious diseases.

[66]  M. Pfaffl,et al.  A new mathematical model for relative quantification in real-time RT-PCR. , 2001, Nucleic acids research.

[67]  V. Fadok,et al.  Macrophages that have ingested apoptotic cells in vitro inhibit proinflammatory cytokine production through autocrine/paracrine mechanisms involving TGF-beta, PGE2, and PAF. , 1998, The Journal of clinical investigation.

[68]  E. Feldman,et al.  Insulin-like Growth Factors Regulate Neuronal Differentiation and Survival , 1997, Neurobiology of Disease.

[69]  Thomas R. Gingeras,et al.  STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..

[70]  I. Capek,et al.  European Bat Lyssavirus Transmission among Cats , 2009 .

[71]  S. Lehnart,et al.  Why Do We Still Have a Maternally Inherited Mitochondrial DNA ? Insights from Evolutionary Medicine , 2007 .

[72]  Hannah V Carey,et al.  Seasonal changes in the intestinal immune system of hibernating ground squirrels. , 2007, Developmental and comparative immunology.

[73]  Hilde van der Togt,et al.  Publisher's Note , 2003, J. Netw. Comput. Appl..

[74]  Kerstin Krieglstein,et al.  Mechanisms of TGF-β-mediated apoptosis , 2001, Cell and Tissue Research.

[75]  A. Botvinkin,et al.  [Experimental lyssavirus infection in chiropters]. , 1994, Voprosy virusologii.