Description of two new species and phylogenetic reassessment of Perelleschus O’Brien & Wibmer, 1986 (Coleoptera: Curculionidae), with a complete taxonomic concept history of Perelleschus sec. Franz & Cardona-Duque, 2013

The weevil genus Perelleschus O’Brien & Wibmer, 1986, is revised; including the description of P. salpinflexus Cardona-Duque & Franz sp. nov. sec. Franz & Cardona-Duque (2013) from Colombia and P. spinothylax Cardona-Duque & Franz sp. nov. sec. Franz & Cardona-Duque (2013) from Colombia and Venezuela. This study furthermore demonstrates the feasibility and utility of the taxonomic concept approach as laid out in Franz & Peet (2009). In particular, we establish and consistently practice a convention where (1) the taxonomic name sec. author annotation is used in all instances where a specific meaning of a name is intended; (2) just the taxonomic name is used to refer to the cumulative nomenclatural and taxonomic legacy associated with that name; and (3) the term [non-focal] is added to a taxonomic name to signal that specifying or redefining its meaning is outside of the scope of this study. We reproduce six classifications and 54 constituent taxonomic concepts that represent a complete taxonomic history of the entities classified in Perelleschus sec. Franz & Cardona-Duque (2013). We provide tabular summaries in which (1) each of the 54 concepts is uniquely identified, (2) the six concept groups are arranged via parent/child relationships into their respective classifications, (3) 76 articulations are asserted to semantically integrate concepts across classifications, and (4) the textual circumscription of each concept is reproduced. These data reveal that the taxonomic history of Perelleschus sec. Franz & Cardona-Duque (2013) has been rather stable at the species level and more complicated at higher levels, where 49 out of 54 articulations are not unambiguously congruent and 37 articulations use the intensional/ostensive annotation. This cumulative information presents a novel use case suitable for representation and reasoning about taxonomic classifications and classification provenance in computational logic. We discuss the merits of this approach and provide recommendations for a wider implementation.

[1]  P. C. Ting The mouth parts of the coleopterous group rhynchophora , 1936 .

[2]  K. Glunther Notizen uber Russelkafar aus Costa Rica , 1936 .

[3]  Trevor Paterson,et al.  Scientific Names Are Ambiguous as Identifiers for Biological Taxa: Their Context and Definition Are Required for Accurate Data Integration , 2005, DILS.

[4]  Anne E. Thessen,et al.  Applications of Natural Language Processing in Biodiversity Science , 2012, Adv. Bioinformatics.

[5]  Jeremy A. Miller,et al.  Is ACCTRAN better than DELTRAN? , 2008 .

[6]  K. Morimoto,et al.  Weevils of the Tribe Acalyptini (Coleoptera: Curculionidae: Curculioninae): Redefinition and a Taxonomic Treatment of the Japanese, Korean and Taiwanese Species , 2005, ESAKIA.

[7]  M. Alonso-Zarazaga Acalyptini C. G. Thomson 1859, correct name for a tribe in Curculioninae (Coleoptera: Curculionidae) and a comment on nomenclatural terminology , 2007 .

[8]  Evolutionary trends in derelomine flower weevils: from associations to homology. , 2005 .

[9]  N. Franz Systematics of Cyclanthura gen.n., a new genus of Derelomini (Coleoptera: Curculionidae) , 2003 .

[10]  N. Franz Towards a phylogenetic system of derelomine flower weevils (Coleoptera: Curculionidae) , 2005 .

[11]  S. Vanin,et al.  On the utility of female genitalia in the systematics of Curculionidae: examples from Entimini and Hylobiina (Coleoptera: Curculionidae) , 2008 .

[12]  K. Nixon The Parsimony Ratchet, a New Method for Rapid Parsimony Analysis , 1999 .

[13]  M. Alonso-Zarazaga,et al.  Systematics of Sitonini (Coleoptera: Curculionidae: Entiminae), with a hypothesis on the evolution of feeding habits , 2007 .

[14]  K. Bremer,et al.  BRANCH SUPPORT AND TREE STABILITY , 1994 .

[15]  J. L. Gittleman,et al.  The Impact of Species Concept on Biodiversity Studies , 2004, The Quarterly Review of Biology.

[16]  Walter Braun,et al.  TaxLink, a Program for Computer-Assisted Documentation of Different Circumscriptions of Biological Taxa , 2001 .

[17]  Nico M. Franz,et al.  BIOLOGICAL TAXONOMY AND ONTOLOGY DEVELOPMENT: SCOPE AND LIMITATIONS , 2010 .

[18]  M. Wanat Alignment and homology of male terminalia in Curculionoidea and other Coleoptera , 2007 .

[19]  J. Kukalová-Peck,et al.  Relationships among coleopteran suborders and major endoneopteran lineages: Evidence from hind wing characters , 2004 .

[20]  R. Beutel,et al.  2. Glossary of Morphological Terms , 2010 .

[21]  Anne E. Thessen,et al.  Data issues in the life sciences , 2011, ZooKeys.

[22]  R. Thompson Observations on the morphology and classification of weevils (Coleoptera, Curculionoidea) with a key to major groups , 1992 .

[23]  J. Morrone,et al.  Phylogenetic systematics of weevils (Coleoptera: Curculionoidea): A reappraisal based on larval and adult morphology , 2000 .

[24]  Nico M. Franz,et al.  On the lack of good scientific reasons for the growing phylogeny/classification gap , 2005 .

[25]  Peter F. Stevens,et al.  Metaphors and typology in the development of botanical systematics 1690-1960, or the art of putting new wine in old bottles , 1984 .

[26]  Bertram Ludäscher,et al.  Merging Sets of Taxonomically Organized Data Using Concept Mappings under Uncertainty , 2009, OTM Conferences.

[27]  N. Franz Outline of an Explanatory Account of Cladistic Practice , 2005 .

[28]  G. Wibmer,et al.  Annotated checklist of the weevils (Curculionidae sensu lato) of South America (Coleoptera, Curculionoidea) , 1986 .

[29]  Pablo Duchen,et al.  The impact of taxonomic change on conservation: Does it kill, can it save, or is it just irrelevant? , 2009 .

[30]  N. Franz,et al.  Evolutionary trends in derelomine flower weevils (Coleoptera : Curculionidae): from associations to homology , 2005 .

[31]  Q. Wheeler The New Taxonomy , 2008 .

[32]  Ellen E. Strong,et al.  Character Coding and Inapplicable Data , 1999 .

[33]  Mário C. C. Pinna CONCEPTS AND TESTS OF HOMOLOGY IN THE CLADISTIC PARADIGM , 1991 .

[34]  Théodore Lacordaire,et al.  Histoire naturelle des insectes : genera des coleopteres, ou expose methodique et critique de tous les genres proposes jusqu'ici dans cet ordre d'insects / , 1854 .

[35]  Katja C. Seltmann,et al.  A Gross Anatomy Ontology for Hymenoptera , 2010, PloS one.

[36]  C. Lyal,et al.  Morphology and systematic significance of sclerolepidia in the weevils (Coleoptera: Curculionoidea) , 2006 .

[37]  Nico M. Franz,et al.  Anatomy of a cladistic analysis , 2014 .

[38]  W. Ride International code of zoological nomenclature = Code international de nomenclature zoologique , 1985 .

[39]  J. Balhoff,et al.  Time to change how we describe biodiversity. , 2012, Trends in ecology & evolution.

[40]  A Ziegler,et al.  Data Analysis and Data Mining: Current Issues in Biomedical Informatics , 2011, Methods of Information in Medicine.

[41]  Steven J. Baskauf ORGANIZATION OF BIODIVERSITY RESOURCES BASED ON THE PROCESS OF THEIR CREATION AND THE ROLE OF INDIVIDUAL ORGANISMS AS RESOURCE RELATIONSHIP NODES , 2010 .

[42]  R. Peet,et al.  Perspectives: Towards a language for mapping relationships among taxonomic concepts , 2009 .

[43]  Eero Hyvönen,et al.  Title : Biological Names and Taxonomies on the Semantic Web-Managing the Change in Scientific Conception Year : 2011 Version : Post print , 2018 .

[44]  Christopher H. C. Lyal,et al.  A world catalogue of families and genera of Curculionoidea (Insecta: Coleoptera) (excepting Scolytidae and Platypodidae). , 1999 .

[45]  N. Franz,et al.  Description and phylogeny of a new Neotropical genus of Acalyptini (Coleoptera: Curculionidae: Curculioninae) associated with the staminodes of Cyclanthaceae , 2012 .

[46]  Nico M. Franz,et al.  Can higher‐level phylogenies of weevils explain their evolutionary success? A critical review , 2010 .

[47]  R. Eriksson Phylogeny of theCyclanthaceae , 1994, Plant Systematics and Evolution.

[48]  N. Franz Analysing the history of the derelomine flower weevil–Carludovica association (Coleoptera: Curculionidae; Cyclanthaceae) , 2004 .

[49]  Randall T. Schuh,et al.  The Linnaean system and its 250-year persistence , 2008, The Botanical Review.

[50]  R. Anderson,et al.  Systenotelus , a remarkable new genus of weevil (Coleoptera: Curculionidae) associated witb Carludovica (Cyclantbaceae) in Costa Rica and Panamá , 2015 .

[51]  Hong Cui CharaParser for fine-grained semantic annotation of organism morphological descriptions , 2012, J. Assoc. Inf. Sci. Technol..

[52]  Bertram Ludäscher,et al.  Reasoning about taxonomies in first-order logic , 2007, Ecol. Informatics.

[53]  W. Quine Ontological Relativity and Other Essays , 1969 .

[54]  G. Hormiga,et al.  Phylogenetic placement of the Tasmanian spider Acrobleps hygrophilus (Araneae, Anapidae) with comments on the evolution of the capture web in Araneoidea , 2008 .

[55]  Marc Geoffroy,et al.  Networking Taxonomic Concepts — Uniting without ‘Unitary-ism’ , 2007 .

[56]  Anthony G. Cohn,et al.  A Spatial Logic based on Regions and Connection , 1992, KR.

[57]  Robert S. Anderson,et al.  Weevils, weevils, weevils everywhere* , 2007 .

[58]  C. W. Stiles,et al.  International Commission on Zoological Nomenclature , 1916, Nature.

[59]  Edward Baker,et al.  Scratchpads 2.0: a Virtual Research Environment supporting scholarly collaboration, communication and data publication in biodiversity science , 2011, ZooKeys.

[60]  Frank van Harmelen,et al.  Handbook of Knowledge Representation , 2008, Handbook of Knowledge Representation.

[61]  N. Franz,et al.  Revision and phylogeny of Perelleschus (Coleoptera: Curculionidae) with notes on its association with Carludovica (Cyclanthaceae) , 2001 .

[62]  J. Farris THE RETENTION INDEX AND THE RESCALED CONSISTENCY INDEX , 1989, Cladistics : the international journal of the Willi Hennig Society.

[63]  J. Padial,et al.  Taxonomic inflation and the stability of species lists: the perils of ostrich's behavior. , 2006, Systematic biology.

[64]  Olivier Rieppel,et al.  The performance of morphological characters in broad‐scale phylogenetic analyses , 2007 .

[65]  Charles W. O'Brien,et al.  Annotated checklist of the weevils (Curculionidae sensu lato) of North America, Central America, and the West Indies (Coleoptera: Curculionoidea) /by Charles W. O'Brien and Guillermo J. Wibmer. , 1982 .

[66]  W. John Kress,et al.  Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples , 2010, ZooKeys.

[67]  Walter G. Berendsohn,et al.  The concept of "potential taxa" in databases , 1995 .