A Cellular Potts Model of single cell migration in presence of durotaxis.
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[1] Marco Scianna,et al. A cellular Potts model analyzing differentiated cell behavior during in vivo vascularization of a hypoxic tissue , 2015, Comput. Biol. Medicine.
[2] Marco Scianna,et al. An extended Cellular Potts Model analyzing a wound healing assay , 2015, Comput. Biol. Medicine.
[3] Jörg Meyer,et al. Cytoskeletal transition in patterned cells correlates with interfacial energy model. , 2014, Soft matter.
[4] L. Preziosi,et al. A cellular Potts model for the MMP-dependent and -independent cancer cell migration in matrix microtracks of different dimensions , 2014 .
[5] L. Preziosi,et al. A cellular Potts model for the MMP-dependent and -independent cancer cell migration in matrix microtracks of different dimensions , 2013, Computational Mechanics.
[6] Yu Suk Choi,et al. Mesenchymal stem cell durotaxis depends on substrate stiffness gradient strength. , 2013, Biotechnology journal.
[7] Roeland M. H. Merks,et al. Cellular Potts Modeling of Tumor Growth, Tumor Invasion, and Tumor Evolution , 2013, Front. Oncol..
[8] L. Preziosi,et al. Modeling the influence of nucleus elasticity on cell invasion in fiber networks and microchannels. , 2013, Journal of theoretical biology.
[9] L. Preziosi,et al. A Cellular Potts Model simulating cell migration on and in matrix environments. , 2012, Mathematical biosciences and engineering : MBE.
[10] D. Discher,et al. Crawling from soft to stiff matrix polarizes the cytoskeleton and phosphoregulates myosin-II heavy chain , 2012, The Journal of cell biology.
[11] Yu Suk Choi,et al. The alignment and fusion assembly of adipose-derived stem cells on mechanically patterned matrices. , 2012, Biomaterials.
[12] A. Voss-Böhme. Multi-Scale Modeling in Morphogenesis: A Critical Analysis of the Cellular Potts Model , 2012, PloS one.
[13] Sangyoon J. Han,et al. Decoupling substrate stiffness, spread area, and micropost density: a close spatial relationship between traction forces and focal adhesions. , 2012, Biophysical journal.
[14] Denis Aubry,et al. 'Run-and-tumble' or 'look-and-run'? A mechanical model to explore the behavior of a migrating amoeboid cell. , 2012, Journal of theoretical biology.
[15] Léa Trichet,et al. Evidence of a large-scale mechanosensing mechanism for cellular adaptation to substrate stiffness , 2012, Proceedings of the National Academy of Sciences.
[16] Luigi Preziosi,et al. Multiscale Developments of the Cellular Potts Model , 2012, Multiscale Model. Simul..
[17] Yunfeng Feng,et al. Dimensional and temporal controls of three-dimensional cell migration by zyxin and binding partners , 2012, Nature Communications.
[18] Marco Scianna,et al. A Multiscale Hybrid Model for Pro-angiogenic Calcium Signals in a Vascular Endothelial Cell , 2011, Bulletin of Mathematical Biology.
[19] L. Preziosi,et al. A multiscale hybrid approach for vasculogenesis and related potential blocking therapies. , 2011, Progress in Biophysics and Molecular Biology.
[20] M. Ventre,et al. A numerical model for durotaxis. , 2011, Journal of theoretical biology.
[21] Faruck Morcos,et al. Study of elastic collisions of Myxococcus xanthus in swarms , 2011, Physical biology.
[22] Olga Ilina,et al. Two-photon laser-generated microtracks in 3D collagen lattices: principles of MMP-dependent and -independent collective cancer cell invasion , 2011 .
[23] Yu-Li Wang,et al. The regulation of traction force in relation to cell shape and focal adhesions. , 2011, Biomaterials.
[24] Olga Ilina,et al. Two-photon laser-generated microtracks in 3D collagen lattices: principles of MMP-dependent and -independent collective cancer cell invasion , 2011, Physical biology.
[25] Sean X. Sun,et al. Adhesion dynamics and durotaxis in migrating cells , 2011, Physical biology.
[26] A. Czirók,et al. Collective cell motion in endothelial monolayers , 2010, Physical biology.
[27] M. Gracheva,et al. A model of fibroblast motility on substrates with different rigidities. , 2010, Biophysical journal.
[28] Zhiliang Xu,et al. A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade. , 2010, Biophysical journal.
[29] Cynthia A. Reinhart-King,et al. Substrate Stiffness and Cell Area Predict Cellular Traction Stresses in Single Cells and Cells in Contact , 2010, Cellular and molecular bioengineering.
[30] J. Glazier,et al. 3D Multi-Cell Simulation of Tumor Growth and Angiogenesis , 2009, PloS one.
[31] Avner Friedman,et al. A mathematical model of ischemic cutaneous wounds , 2009, Proceedings of the National Academy of Sciences.
[32] Y. K. Cheung,et al. Microscale control of stiffness in a cell-adhesive substrate using microfluidics-based lithography. , 2009, Angewandte Chemie.
[33] Luigi Preziosi,et al. Individual cell-based models of cell scatter of ARO and MLP-29 cells in response to hepatocyte growth factor. , 2009, Journal of theoretical biology.
[34] P. A. Dimilla,et al. Vascular smooth muscle cell durotaxis depends on substrate stiffness gradient strength. , 2009, Biophysical journal.
[35] Roeland M. H. Merks,et al. Modeling Morphogenesis in silico and in vitro: Towards Quantitative, Predictive, Cell-based Modeling , 2009 .
[36] Brenda M Rubenstein,et al. The role of extracellular matrix in glioma invasion: a cellular Potts model approach. , 2008, Biophysical journal.
[37] Marion Ghibaudo,et al. Traction forces and rigidity sensing regulate cell functions , 2008 .
[38] Zhiliang Xu,et al. A multiscale model of thrombus development , 2008, Journal of The Royal Society Interface.
[39] M. Doblaré,et al. Modeling mechanosensing and its effect on the migration and proliferation of adherent cells. , 2008, Acta biomaterialia.
[40] J. Glazier,et al. Simulation of single-species bacterial-biofilm growth using the Glazier-Graner-Hogeweg model and the CompuCell3D modeling environment. , 2008, Mathematical biosciences and engineering : MBE.
[41] T. Newman,et al. Modeling cell rheology with the Subcellular Element Model , 2008, Physical biology.
[42] G. Charras,et al. Polar stimulation and constrained cell migration in microfluidic channels. , 2007, Lab on a chip.
[43] Marion Ghibaudo,et al. Rigidity-driven growth and migration of epithelial cells on microstructured anisotropic substrates , 2007, Proceedings of the National Academy of Sciences.
[44] Yi Jiang,et al. A cell-based model exhibiting branching and anastomosis during tumor-induced angiogenesis. , 2007, Biophysical journal.
[45] A. Deutsch,et al. A New Mechanism for Collective Migration in Myxococcus xanthus , 2007 .
[46] J. Spatz,et al. Cellular chemomechanics at interfaces: sensing, integration and response. , 2007, Soft matter.
[47] Andras Czirok,et al. Network formation of tissue cells via preferential attraction to elongated structures. , 2006, Physical review letters.
[48] S. Sen,et al. Matrix Elasticity Directs Stem Cell Lineage Specification , 2006, Cell.
[49] Alexandra Jilkine,et al. Polarization and Movement of Keratocytes: A Multiscale Modelling Approach , 2006, Bulletin of mathematical biology.
[50] Maciej Swat,et al. Adhesion between cells, diffusion of growth factors, and elasticity of the AER produce the paddle shape of the chick limb. , 2006, Physica A.
[51] Micah Dembo,et al. The dynamics and mechanics of endothelial cell spreading. , 2005, Biophysical journal.
[52] S A Newman,et al. On multiscale approaches to three-dimensional modelling of morphogenesis , 2005, Journal of The Royal Society Interface.
[53] Roeland M. H. Merks,et al. Contact-Inhibited Chemotaxis in De Novo and Sprouting Blood-Vessel Growth , 2005, PLoS Comput. Biol..
[54] Andreas Deutsch,et al. Pigment pattern formation in zebrafish during late larval stages: A model based on local interactions , 2005, Developmental dynamics : an official publication of the American Association of Anatomists.
[55] A. Engler,et al. Photopolymerization in Microfluidic Gradient Generators: Microscale Control of Substrate Compliance to Manipulate Cell Response , 2004 .
[56] Jesús A. Izaguirre,et al. A Hybrid Discrete-Continuum Model for 3-D Skeletogenesis of the Vertebrate Limb , 2004, ACRI.
[57] Adam J. Engler,et al. Myotubes differentiate optimally on substrates with tissue-like stiffness , 2004, The Journal of cell biology.
[58] Vladimir P. Zhdanov,et al. Simulation of the growth and differentiation of stem cells on a heterogeneous scaffold , 2004 .
[59] A. Deutsch,et al. Mathematical modeling of regulatory mechanisms in yeast colony development. , 2004, Journal of theoretical biology.
[60] U. Schwarz,et al. Cell organization in soft media due to active mechanosensing , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[61] G. Whitesides,et al. Cell shape provides global control of focal adhesion assembly. , 2003, Biochemical and biophysical research communications.
[62] Nicholas J Savill,et al. Control of epidermal stem cell clusters by Notch-mediated lateral induction. , 2003, Developmental biology.
[63] Daniel A. Hammer,et al. Endothelial Cell Traction Forces on RGD-Derivatized Polyacrylamide Substrata † , 2003 .
[64] Christopher S. Chen,et al. Cells lying on a bed of microneedles: An approach to isolate mechanical force , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[65] Lisa A Flanagan,et al. Neurite branching on deformable substrates , 2002, Neuroreport.
[66] Philip K. Maini,et al. Mathematical Models for Cell-Matrix Interactions during Dermal Wound Healing , 2002, Int. J. Bifurc. Chaos.
[67] J. Sherratt,et al. Intercellular adhesion and cancer invasion: a discrete simulation using the extended Potts model. , 2002, Journal of theoretical biology.
[68] Atsushi Mochizuki,et al. Pattern formation of the cone mosaic in the zebrafish retina: a cell rearrangement model. , 2002, Journal of theoretical biology.
[69] Shu Chien,et al. The role of the dynamics of focal adhesion kinase in the mechanotaxis of endothelial cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[70] P. Hogeweg,et al. How amoeboids self-organize into a fruiting body: Multicellular coordination in Dictyostelium discoideum , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[71] D. Drasdo,et al. Modeling the interplay of generic and genetic mechanisms in cleavage, blastulation, and gastrulation , 2000, Developmental dynamics : an official publication of the American Association of Anatomists.
[72] M. Dembo,et al. Cell movement is guided by the rigidity of the substrate. , 2000, Biophysical journal.
[73] Paul Martin,et al. Wound Healing--Aiming for Perfect Skin Regeneration , 1997, Science.
[74] D. Lauffenburger,et al. Cell Migration: A Physically Integrated Molecular Process , 1996, Cell.
[75] S. Haskill,et al. Signal transduction from the extracellular matrix , 1993, The Journal of cell biology.
[76] Glazier,et al. Simulation of biological cell sorting using a two-dimensional extended Potts model. , 1992, Physical review letters.
[77] K R Robinson,et al. The responses of cells to electrical fields: a review , 1985, The Journal of cell biology.
[78] Malcolm S. Steinberg,et al. Reconstruction of Tissues by Dissociated Cells , 1963 .
[79] H. Harris. Role of chemotaxis in inflammation. , 1954, Physiological reviews.
[80] N. Metropolis,et al. Equation of State Calculations by Fast Computing Machines , 1953, Resonance.
[81] R. B. Potts. Some generalized order-disorder transformations , 1952, Mathematical Proceedings of the Cambridge Philosophical Society.
[82] E. Ising. Beitrag zur Theorie des Ferromagnetismus , 1925 .
[83] A. Czirók,et al. The Role of Cell-Cell Adhesion in the Formation of Multicellular Sprouts. , 2010, Mathematical modelling of natural phenomena.
[84] Roeland M. H. Merks,et al. The Cellular Potts Model in Biomedicine , 2007 .
[85] James A. Glazier,et al. Magnetization to Morphogenesis: A Brief History of the Glazier-Graner-Hogeweg Model , 2007 .
[86] Roeland M. H. Merks,et al. II. 4 The Glazier–Graner–Hogeweg Model: Extensions, Future Directions, and Opportunities for Further Study , 2007 .
[87] Roeland M. H. Merks,et al. Dynamic mechanisms of blood vessel growth , 2006, Nonlinearity.
[88] Roeland M. H. Merks,et al. Cell elongation is key to in silico replication of in vitro vasculogenesis and subsequent remodeling. , 2006, Developmental biology.
[89] P. Janmey,et al. Effects of substrate stiffness on cell morphology, cytoskeletal structure, and adhesion. , 2005, Cell motility and the cytoskeleton.
[90] Dennis Discher,et al. Substrate compliance versus ligand density in cell on gel responses. , 2004, Biophysical journal.
[91] L. Liotta,et al. Molecular mediators of interactions with extracellular matrix components in metastasis and angiogenesis. , 1994, Current opinion in oncology.
[92] M. S. Steinberg,et al. Reconstruction of tissues by dissociated cells. Some morphogenetic tissue movements and the sorting out of embryonic cells may have a common explanation. , 1963, Science.