Segmentation of the complete superior cerebellar peduncles using a multi-object geometric deformable model

The superior cerebellar peduncles (SCPs) are white matter tracts that serve as the major efferent pathways from the cerebellum to the thalamus. With diffusion tensor images (DTI), tractography algorithms or volumetric segmentation methods have been able to reconstruct part of the SCPs. However, when the fibers cross, the primary eigenvector (PEV) no longer represents the primary diffusion direction. Therefore, at the crossing of the left and right SCP, known as the decussation of the SCPs (dSCP), fiber tracts propagate incorrectly. To our knowledge, previous methods have not been able to segment the SCPs correctly. In this work, we explore the diffusion properties and seek to volumetrically segment the complete SCPs. The non-crossing SCPs and dSCP are modeled as different objects. A multi-object geometric deformable model is employed to define the boundaries of each piece of the SCPs, with the forces derived from diffusion properties as well as the PEV. We tested our method on a software phantom and real subjects. Results indicate that our method is able to the resolve the crossing and segment the complete SCPs with repeatability.

[1]  Jerry L. Prince,et al.  A fiber tracking method guided by volumetric tract segmentation , 2012, 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis.

[2]  Aldo Quattrone,et al.  Apparent diffusion coefficient of the superior cerebellar peduncle differentiates progressive supranuclear palsy from Parkinson's disease , 2008, Movement disorders : official journal of the Movement Disorder Society.

[3]  Jerry L. Prince,et al.  A multiple object geometric deformable model for image segmentation , 2013, Comput. Vis. Image Underst..

[4]  Jerry L. Prince,et al.  Direct segmentation of the major white matter tracts in diffusion tensor images , 2011, NeuroImage.

[5]  Jerry L. Prince,et al.  Orthogonal diffusion-weighted MRI measures distinguish region-specific degeneration in cerebellar ataxia subtypes , 2009, Journal of Neurology.

[6]  Dušan Ristanović,et al.  Morphology and classification of large neurons in the adult human dentate nucleus: A qualitative and quantitative analysis of 2D images , 2010, Neuroscience Research.

[7]  Dai Zhang,et al.  A diffusion tensor imaging study of middle and superior cerebellar peduncle in male patients with schizophrenia , 2003, Neuroscience Letters.

[8]  Jerry L. Prince,et al.  Generalized gradient vector flow external forces for active contours , 1998, Signal Process..

[9]  W. Eric L. Grimson,et al.  Statistical modeling and EM clustering of white matter fiber tracts , 2006, 3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro, 2006..

[10]  Jerry L. Prince,et al.  A novel contrast for DTI visualization for thalamus delineation , 2010, Medical Imaging.

[11]  Pierre-Louis Bazin,et al.  Homeomorphic brain image segmentation with topological and statistical atlases , 2008, Medical Image Anal..

[12]  Jerry L. Prince,et al.  Labeling of the cerebellar peduncles using a supervised Gaussian classifier with volumetric tract segmentation , 2012, Medical Imaging.

[13]  Gareth J. Barker,et al.  Estimating distributed anatomical connectivity using fast marching methods and diffusion tensor imaging , 2002, IEEE Transactions on Medical Imaging.