DNA hairpins primarily promote duplex melting rather than inhibiting hybridization
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Liam P. Shaw | J. Doye | A. Louis | T. Ouldridge | P. Šulc | J. Schreck | F. Romano
[1] S. Wereley,et al. Soft Matter , 2014 .
[2] J. Doye,et al. DNA hybridization kinetics: zippering, internal displacement and sequence dependence , 2013, Nucleic acids research.
[3] J. Doye,et al. Sequence-dependent thermodynamics of a coarse-grained DNA model. , 2012, The Journal of chemical physics.
[4] T. Ouldridge. Inferring bulk self-assembly properties from simulations of small systems with multiple constituent species and small systems in the grand canonical ensemble. , 2012, The Journal of chemical physics.
[5] J. Doye,et al. Extracting bulk properties of self-assembling systems from small simulations , 2009, Journal of physics. Condensed matter : an Institute of Physics journal.
[6] D. Y. Zhang,et al. Control of DNA strand displacement kinetics using toehold exchange. , 2009, Journal of the American Chemical Society.
[7] John Russo,et al. Reversible gels of patchy particles: role of the valence. , 2009, The Journal of chemical physics.
[8] Ilpo Vattulainen,et al. Multiscale modeling of emergent materials: biological and soft matter. , 2009, Physical chemistry chemical physics : PCCP.
[9] S. Whitelam,et al. The role of collective motion in examples of coarsening and self-assembly. , 2008, Soft matter.
[10] Lauren K. Wolf,et al. Secondary structure effects on DNA hybridization kinetics: a solution versus surface comparison , 2006, Nucleic acids research.
[11] 刘金明,et al. IL-13受体α2降低血吸虫病肉芽肿的炎症反应并延长宿主存活时间[英]/Mentink-Kane MM,Cheever AW,Thompson RW,et al//Proc Natl Acad Sci U S A , 2005 .
[12] M. Zuker,et al. Prediction of hybridization and melting for double-stranded nucleic acids. , 2004, Biophysical journal.
[13] Berend Smit,et al. Understanding Molecular Simulation , 2001 .
[14] J. SantaLucia,et al. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[15] D. Crothers,et al. Measurement of diffusion constants for nucleic acids by NMR , 1997, Journal of biomolecular NMR.
[16] Alan M. Ferrenberg,et al. New Monte Carlo technique for studying phase transitions. , 1988, Physical review letters.
[17] G. Torrie,et al. Nonphysical sampling distributions in Monte Carlo free-energy estimation: Umbrella sampling , 1977 .
[18] L. Verlet. Computer "Experiments" on Classical Fluids. I. Thermodynamical Properties of Lennard-Jones Molecules , 1967 .