Genetics of rheumatoid arthritis: confronting complexity

The genetic basis for rheumatoid arthritis (RA) is likely to be extremely complex. Even the role of MHC genes remains to be fully defined, and may involve interactive genetic effects. The difficulty of precisely defining the clinical phenotype, as well as underlying genetic heterogeneity, complicates the problem. In addition, stochastic genetic or physiologic events may contribute to the low penetrance of susceptibility genes. This situation parallels developing paradigms for other autoimmune disorders, in which many different genes each appear to contribute a small amount to overall risk for disease, and where severity and specific phenotypic subtypes are subject to genetic effects. The completion of the human genome project, along with advances in informatics, will be required to reach a deeper understanding of RA. It is likely that this will involve an iterative and interactive process between several different scientific disciplines.

[1]  N. Risch Linkage strategies for genetically complex traits. I. Multilocus models. , 1990, American journal of human genetics.

[2]  A. Silman,et al.  Blood transfusion, smoking, and obesity as risk factors for the development of rheumatoid arthritis: results from a primary care-based incident case-control study in Norfolk, England. , 1997, Arthritis and rheumatism.

[3]  J. Todd,et al.  Insulin expression in human thymus is modulated by INS VNTR alleles at the IDDM2 locus , 1997, Nature Genetics.

[4]  Paul Wordsworth,et al.  HLA heterozygosity contributes to susceptibility to rheumatoid arthritis. , 1992, American journal of human genetics.

[5]  J. Hansen,et al.  Specific HLA-DR4-associated histocompatibility molecules characterize patients with seropositive juvenile rheumatoid arthritis. , 1984, The Journal of clinical investigation.

[6]  D. Kastner,et al.  The hereditary periodic fever syndromes: molecular analysis of a new family of inflammatory diseases. , 1998, Human molecular genetics.

[7]  F. Christiansen,et al.  The genetic basis for the association of the 8.1 ancestral haplotype (A1, B8, DR3) with multiple immunopathological diseases , 1999, Immunological reviews.

[8]  Paul Wordsworth,et al.  Analysis of T cell receptor V alpha polymorphisms in rheumatoid arthritis , 1998, Annals of the rheumatic diseases.

[9]  M. King,et al.  Genetic interrelationship between insulin-dependent diabetes mellitus, the autoimmune thyroid diseases, and rheumatoid arthritis. , 1986, American journal of human genetics.

[10]  A. Silman,et al.  Investigation of candidate disease susceptibility genes in rheumatoid arthritis: principles and strategies. , 1997, The Journal of rheumatology.

[11]  A. Silman,et al.  The Arthritis and Rheumatism Council's national family material repository. , 1993, British journal of rheumatology.

[12]  Jing-Ping Lin,et al.  Familial clustering of rheumatoid arthritis with other autoimmune diseases , 1998, Human Genetics.

[13]  P. Gregersen,et al.  Commitment to X inactivation precedes the twinning event in monochorionic MZ twins. , 1998, American journal of human genetics.

[14]  P. Woo,et al.  Polymorphic haplotypes of the interleukin-10 5' flanking region determine variable interleukin-10 transcription and are associated with particular phenotypes of juvenile rheumatoid arthritis. , 1999, Arthritis and rheumatism.

[15]  P. Gregersen,et al.  The shared epitope hypothesis. An approach to understanding the molecular genetics of susceptibility to rheumatoid arthritis. , 1987, Arthritis and rheumatism.

[16]  M.M.R. Williams The Sun the Genome and the Internet , 2000 .

[17]  A. Long,et al.  The power of association studies to detect the contribution of candidate genetic loci to variation in complex traits. , 1999, Genome research.

[18]  C. Amos,et al.  The role of T cell receptor beta chain genes in susceptibility to rheumatoid arthritis. , 1995, Arthritis and rheumatism.

[19]  M. González-Escribano,et al.  CTLA4 polymorphisms in Spanish patients with rheumatoid arthritis. , 1999, Tissue antigens.

[20]  K. Usadel,et al.  CTLA4 codon 17 dimorphism in patients with rheumatoid arthritis. , 1998, Tissue antigens.

[21]  B. Kuska Snipping "SNPs": a new tool for mining gene variations. , 1999, Journal of the National Cancer Institute.

[22]  F. Schuit,et al.  CTLA‐4 gene polymorphism confers susceptibility to insulin‐dependent diabetes mellitus (IDDM) independently from age and from other genetic or immune disease markers , 1997, Clinical and experimental immunology.

[23]  B. Beghé,et al.  Comparison of three methods for single nucleotide polymorphism typing for DNA bank studies: Sequence‐specific oligonucleotide probe hybridisation, TaqMan liquid phase hybridisation, and microplate array diagonal gel electrophoresis (MADGE) , 1999, Human mutation.

[24]  R. Jaenisch,et al.  RNA and the Epigenetic Regulation of X Chromosome Inactivation , 1998, Cell.

[25]  Ian Todd,et al.  Germline Mutations in the Extracellular Domains of the 55 kDa TNF Receptor, TNFR1, Define a Family of Dominantly Inherited Autoinflammatory Syndromes , 1999, Cell.

[26]  H. Mcdevitt,et al.  Effects of a polymorphism in the human tumor necrosis factor alpha promoter on transcriptional activation. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[27]  M. González-Gay,et al.  Could HLA-DRB1 be the protective locus in rheumatoid arthritis? , 1995, Immunology today.

[28]  Amanda J. Wilson,et al.  A male-female bias in type 1 diabetes and linkage to chromosome Xp in MHC HLA-DR3-positive patients , 1998, Nature Genetics.

[29]  C. Weyand,et al.  The Influence of HLA-DRB1 Genes on Disease Severity in Rheumatoid Arthritis , 1992, Annals of Internal Medicine.

[30]  G. Nepom Major histocompatibility complex-directed susceptibility to rheumatoid arthritis. , 1998, Advances in immunology.

[31]  M. Babron,et al.  Investigation of the HLA component involved in rheumatoid arthritis (RA) by using the marker association-segregation chi-square (MASC) method: rejection of the unifying-shared-epitope hypothesis. , 1993, American journal of human genetics.

[32]  E. Lander,et al.  Characterization of single-nucleotide polymorphisms in coding regions of human genes , 1999 .

[33]  M. Bittner,et al.  Expression profiling using cDNA microarrays , 1999, Nature Genetics.

[34]  A. Chakravarti It's raining SNPs, hallelujah? , 1998, Nature Genetics.

[35]  P. Barnes,et al.  Haplotype associated with low interleukin-10 production in patients with severe asthma , 1998, The Lancet.

[36]  E. Boerwinkle,et al.  DNA sequence diversity in a 9.7-kb region of the human lipoprotein lipase gene , 1998, Nature Genetics.

[37]  J. Weissenbach,et al.  Association of rheumatoid arthritis with an amino acid allelic variation of the T cell receptor. , 1997, Arthritis and rheumatism.

[38]  C. Cobra,et al.  [Etiology and pathogenesis of rheumatoid arthritis. I. ]. , 1956, Revista brasileira de medicina.

[39]  J. Trent,et al.  Clustering of non-major histocompatibility complex susceptibility candidate loci in human autoimmune diseases. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[40]  M. King,et al.  Tumor necrosis factor a microsatellite polymorphism is associated with rheumatoid arthritis severity through an interaction with the HLA-DRB1 shared epitope. , 1999, Arthritis and rheumatism.

[41]  I. Auger,et al.  HLA–DR4 and HLA–DR10 motifs that carry susceptibility to rheumatoid arthritis bind 70–kD heat shock proteins , 1996, Nature Medicine.

[42]  G. Gyapay,et al.  New susceptibility locus for rheumatoid arthritis suggested by a genome-wide linkage study. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[43]  C. Sapienza,et al.  Monoallelic expression: 'there can only be one'. , 1998, Trends in genetics : TIG.

[44]  A. Silman,et al.  Quantifying the exact role of HLA-DRB1 alleles in susceptibility to inflammatory polyarthritis: results from a large, population-based study. , 1999, Arthritis and rheumatism.

[45]  B. Croker,et al.  Epistatic modifiers of autoimmunity in a murine model of lupus nephritis. , 1999, Immunity.

[46]  P. Stastny Association of the B-cell alloantigen DRw4 with rheumatoid arthritis. , 1978, The New England journal of medicine.

[47]  S. Bale,et al.  Familial autoimmunity in pedigrees of idiopathic inflammatory myopathy patients suggests common genetic risk factors for many autoimmune diseases. , 1998, Arthritis and rheumatism.

[48]  D. Kranz,et al.  Binding energetics of T-cell receptors: correlation with immunological consequences. , 1999, Immunology today.

[49]  A. Silman,et al.  Twin concordance rates for rheumatoid arthritis: results from a nationwide study. , 1993, British journal of rheumatology.

[50]  C. Amos,et al.  Genetic variability in the tumor necrosis factor-lymphotoxin region influences susceptibility to rheumatoid arthritis. , 1996, American journal of human genetics.

[51]  W. Ollier,et al.  IL-10 gene promoter polymorphisms in rheumatoid arthritis. , 1998, Scandinavian journal of rheumatology.

[52]  N Risch,et al.  The Future of Genetic Studies of Complex Human Diseases , 1996, Science.

[53]  H. Paulus,et al.  The joint alignment and motion scale: a simple measure of joint deformity in patients with rheumatoid arthritis. , 1987, The Journal of rheumatology.

[54]  R. Strange,et al.  Association of polymorphism in glutathione S-transferase loci with susceptibility and outcome in rheumatoid arthritis: comparison with the shared epitope , 1999, Annals of the rheumatic diseases.

[55]  K. Aho,et al.  Twin studies in rheumatic diseases. , 1994, Seminars in arthritis and rheumatism.

[56]  D. Green,et al.  Dominant-negative p53 mutations in rheumatoid arthritis. , 1999, Arthritis and rheumatism.

[57]  B. Tycko Genomic imprinting: mechanism and role in human pathology. , 1994, The American journal of pathology.

[58]  William N. Kelley,et al.  Textbook of rheumatology , 1985 .

[59]  M. King,et al.  Synergy between T cell receptor beta gene polymorphism and HLA-DR4 in susceptibility to rheumatoid arthritis. , 1996, Arthritis and rheumatism.

[60]  John A Todd,et al.  Genetic Analysis of Autoimmune Disease , 1996, Cell.

[61]  P. Gregersen,et al.  The genetics revolution and the assault on rheumatoid arthritis. , 1999, Arthritis and rheumatism.

[62]  J. Stewart The female X-inactivation mosaic in systemic lupus erythematosus. , 1998, Immunology today.

[63]  T. Griffin,et al.  Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[64]  M. King,et al.  Inheritance of the shared epitope and long‐term outcomes of rheumatoid arthritis among community‐based Caucasian females , 1998, Genetic epidemiology.

[65]  P. Gregersen,et al.  The North American Rheumatoid Arthritis Consortium--bringing genetic analysis to bear on disease susceptibility, severity, and outcome. , 1998, Arthritis care and research : the official journal of the Arthritis Health Professions Association.

[66]  Yuri M. Svirezhev,et al.  Multi-Locus Models , 1990 .

[67]  N. Schork,et al.  Who's afraid of epistasis? , 1996, Nature Genetics.

[68]  W. O'Fallon,et al.  Mechanisms underlying the formation of the T cell receptor repertoire in rheumatoid arthritis. , 1995, Immunity.

[69]  A. Silman,et al.  Epidemiology of the rheumatic diseases. , 1993, Current opinion in rheumatology.

[70]  J. Meyer,et al.  Sex influences on the penetrance of HLA shared-epitope genotypes for rheumatoid arthritis. , 1996, American journal of human genetics.

[71]  C Terhorst,et al.  Monoallelic expression of the interleukin-2 locus. , 1998, Science.

[72]  K. Usadel,et al.  CTLA4 alanine-17 confers genetic susceptibility to Graves' disease and to type 1 diabetes mellitus. , 1997, The Journal of clinical endocrinology and metabolism.

[73]  P. Gregersen Discordance for autoimmunity in monozygotic twins. Are "identical" twins really identical? , 1993, Arthritis and rheumatism.

[74]  C. Werning [Rheumatoid arthritis]. , 1983, Medizinische Monatsschrift fur Pharmazeuten.

[75]  D. Littman,et al.  Regulation of IL-4 expression by activation of individual alleles. , 1998, Immunity.

[76]  C. Berry,et al.  Genetic bias in immune responses to a cassette shared by different microorganisms in patients with rheumatoid arthritis. , 1997, The Journal of clinical investigation.

[77]  C. Baerwald,et al.  Corticotropin releasing hormone promoter region polymorphisms in rheumatoid arthritis. , 1997, The Journal of rheumatology.

[78]  B. Mazières,et al.  Interleukin‐1β, interleukin‐1 receptor antagonist, interleukin‐4, and interleukin‐10 gene polymorphisms: Relationship to occurrence and severity of rheumatoid arthritis , 1999 .

[79]  A. Silman,et al.  Linkage and association studies of the natural resistance associated macrophage protein 1 (NRAMP1) locus in rheumatoid arthritis. , 1997, The Journal of rheumatology.

[80]  N. Shen,et al.  Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis , 1999, Nature Genetics.