Polymorphism of DNA sequence in the human pro alpha 2(I) collagen gene.

The human pro alpha 2(I) collagen gene was analysed for the presence of restriction fragment length polymorphisms. DNA from randomly selected unrelated persons of three Southern African populations was cleaved with one of eight different restriction enzymes, electrophoresed, blotted, and hybridised with cDNA and genomic probes specific for the pro alpha 2(I) gene. An MspI polymorphism was detected which results from the loss of a cleavage site within the 3' half of the gene. In two of the populations studied, the polymorphism occurred at significant frequencies, and should therefore prove useful as a genetic marker for the study of inherited disorders of connective tissue involving collagen structure or biosynthesis.

[1]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[2]  C. Mathew,et al.  Blot hybridisation analysis of genomic DNA. , 1984, Journal of medical genetics.

[3]  J. Ting,et al.  Isolation and Characterization of a Human Pro α2(I) Collagen Gene Segment , 1984 .

[4]  K. Cheah,et al.  Lethal osteogenesis imperfecta congenita and a 300 base pair gene deletion for an alpha 1(I)-like collagen. , 1984, British medical journal.

[5]  P. Bornstein,et al.  Biosynthetic and structural properties of endothelial cell type VIII collagen. , 1983, The Journal of biological chemistry.

[6]  D. Prockop,et al.  Restriction fragment length polymorphism associated with the pro alpha 2(I) gene of human type I procollagen. Application to a family with an autosomal dominant form of osteogenesis imperfecta. , 1983, The Journal of clinical investigation.

[7]  M. Di Liberto,et al.  Analysis of the 3' end of the human pro-alpha 2(I) collagen gene. Utilization of multiple polyadenylation sites in cultured fibroblasts. , 1983, The Journal of biological chemistry.

[8]  J. Hirsch,et al.  Internal deletion in a collagen gene in a perinatal lethal form of osteogenesis imperfecta , 1983, Nature.

[9]  T. Pihlajaniemi,et al.  Synthesis of a shortened pro-alpha 2(I) chain and decreased synthesis of pro-alpha 2(I) chains in a proband with osteogenesis imperfecta. , 1983, The Journal of biological chemistry.

[10]  D. Prockop,et al.  Synthesis and processing of a type I procollagen containing shortened pro-alpha 1(I) chains by fibroblasts from a patient with osteogenesis imperfecta. , 1983, The Journal of biological chemistry.

[11]  S. Antonarakis,et al.  Prenatal diagnosis using DNA polymorphisms. Report on 95 pregnancies at risk for sickle-cell disease or beta-thalassemia. , 1983, The New England journal of medicine.

[12]  R. Timpl,et al.  Electron-microscopical approach to a structural model of intima collagen. , 1983, The Biochemical journal.

[13]  M L Chu,et al.  Structure of a cDNA for the pro alpha 2 chain of human type I procollagen. Comparison with chick cDNA for pro alpha 2(I) identifies structurally conserved features of the protein and the gene. , 1983, Biochemistry.

[14]  P. Byers,et al.  Abnormal alpha 2-chain in type I collagen from a patient with a form of osteogenesis imperfecta. , 1983, The Journal of clinical investigation.

[15]  M. Gross,et al.  Assignment of the human pro alpha 2(I) collagen structural gene (COLIA2) to chromosome 7 by molecular hybridization. , 1982, American journal of human genetics.

[16]  D. Botstein,et al.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms. , 1980, American journal of human genetics.

[17]  L. Díaz de León,et al.  The synthesis of presumptive procollagen messenger ribonucleic acid in the calvaria of the developing chick embryo. , 1978, Biochimica et biophysica acta.

[18]  A. Jeffreys,et al.  A physical map of the DNA regions flanking the rabbit β-globin gene , 1977, Cell.

[19]  E. Southern Detection of specific sequences among DNA fragments separated by gel electrophoresis. , 1975, Journal of molecular biology.

[20]  J. Myers,et al.  Human proα1(I) collagen gene structure reveals evolutionary conservation of a pattern of introns and exons , 1984, Nature.

[21]  A. Henderson,et al.  Localization of the human 2(I) collagen gene (COL1A2) to chromosome 7q22. , 1983, Cytogenetics and cell genetics.

[22]  E. J. Miller,et al.  Collagen: an overview. , 1982, Methods in enzymology.

[23]  P. Bornstein,et al.  Structurally distinct collagen types. , 1980, Annual review of biochemistry.

[24]  M. C. Botha Blood group gene frequencies. An indication of the genetic constitution of population samples in Cape Town. , 1972, The American journal of roentgenology, radium therapy, and nuclear medicine.