A standard MIGS/MIMS compliant XML Schema: toward the development of the Genomic Contextual Data Markup Language (GCDML).
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Renzo Kottmann | Frank Oliver Glöckner | Sean Murphy | Leonid Kagan | Dawn Field | Tanya Gray | Thierry Lombardot | Saul Kravitz | S. Kravitz | F. Glöckner | D. Field | Leonid Kagan | Sean Murphy | Tanya Gray | R. Kottmann | T. Lombardot
[1] Matthew Jones,et al. Maximizing the Value of Ecological Data with Structured Metadata: An Introduction to Ecological Metadata Language (EML) and Principles for Metadata Creation , 2005 .
[2] George M. Garrity,et al. Meeting report for SIGS1: First Conference of the Standards in Genomic Sciences eJournal , 2009, Standards in genomic sciences.
[3] R. Fleischmann,et al. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.
[4] Rolf Apweiler,et al. Genome Reviews: standardizing content and representation of information about complete genomes. , 2006, Omics : a journal of integrative biology.
[5] S. Kravitz,et al. CAMERA: A Community Resource for Metagenomics , 2007, PLoS biology.
[6] C. Sander,et al. The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data , 2004, Nature Biotechnology.
[7] P. Bork,et al. Get the most out of your metagenome: computational analysis of environmental sequence data. , 2007, Current opinion in microbiology.
[8] Jan Krüger,et al. Playing with pesticides. , 1998, BMC Bioinformatics.
[9] Chris F. Taylor,et al. The minimum information about a genome sequence (MIGS) specification , 2008, Nature Biotechnology.
[10] Peter F. Hallin,et al. Ten years of bacterial genome sequencing: comparative-genomics-based discoveries , 2006, Functional & Integrative Genomics.
[11] Renzo Kottmann,et al. Meeting report: the fifth Genomic Standards Consortium (GSC) workshop. , 2008, Omics : a journal of integrative biology.
[12] I-Min A. Chen,et al. The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions , 2007, Nucleic Acids Res..
[13] Renzo Kottmann,et al. Megx.net: integrated database resource for marine ecological genomics , 2009, Nucleic Acids Res..
[14] Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Special Interest Group at ISMB 2009 , 2009, Standards in genomic sciences.
[15] Nigel W. Hardy,et al. The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics , 2007, Nature Biotechnology.
[16] W. Ludwig,et al. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB , 2007, Nucleic acids research.
[17] David S. Burggraf. Geography Markup Language , 2006, Data Sci. J..
[18] Renzo Kottmann,et al. Meeting Report from the Genomic Standards Consortium (GSC) Workshops 6 and 7 , 2009, Standards in genomic sciences.
[19] Eoin L. Brodie,et al. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB , 2006, Applied and Environmental Microbiology.
[20] Renzo Kottmann,et al. Megx.net—database resources for marine ecological genomics , 2005, Nucleic Acids Res..
[21] Guy Cochrane,et al. Concept of sample in OMICS technology. , 2006, Omics : a journal of integrative biology.
[22] Eric van der Vlist,et al. XML Schema , 2002 .
[23] Renzo Kottmann,et al. Defining linkages between the GSC and NSF's LTER program: how the Ecological Metadata Language (EML) relates to GCDML and other outcomes. , 2008, Omics : a journal of integrative biology.
[24] I-Min A. Chen,et al. The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata , 2007, Nucleic Acids Res..
[25] Nikos Kyrpides,et al. The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata , 2007, Nucleic Acids Res..
[26] A. Halpern,et al. The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific , 2007, PLoS biology.
[27] Tomas Vitvar,et al. SAWSDL: Semantic Annotations for WSDL and XML Schema , 2007, IEEE Internet Computing.
[28] Renzo Kottmann,et al. Habitat-Lite: a GSC case study based on free text terms for environmental metadata. , 2008, Omics : a journal of integrative biology.
[29] Dawn Field,et al. Cataloguing our current genome collection. , 2005, Microbiology.
[30] Chris F. Taylor,et al. Development of FuGO: an ontology for functional genomics investigations. , 2006, Omics : a journal of integrative biology.
[31] Nigel W. Hardy,et al. The first RSBI (ISA-TAB) workshop: "can a simple format work for complex studies?". , 2008, Omics : a journal of integrative biology.
[32] James R. Cole,et al. The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data , 2006, Nucleic Acids Res..
[33] Ethan Cerami,et al. XML for bioinformatics , 2005 .
[34] Daniel Hanisch,et al. ProML - the Protein Markup Language for specification of protein sequences, structures and families , 2002, Silico Biol..
[35] John C. Wooley,et al. Extending Standards for Genomics and Metagenomics Data: A Research Coordination Network for the Genomic Standards Consortium (RCN4GSC) , 2009, Standards in genomic sciences.