A 454 sequencing approach to dipteran mitochondrial genome research.
暂无分享,去创建一个
[1] U. John,et al. The complete mitochondrial genome of the stonefly Dinocras cephalotes (Plecoptera, Perlidae) , 2015, Mitochondrial DNA.
[2] S. Cameron. How to sequence and annotate insect mitochondrial genomes for systematic and comparative genomics research , 2014 .
[3] C. Kyle,et al. Characterization of microsatellite loci in Phormia regina towards expanding molecular applications in forensic entomology. , 2014, Forensic science international.
[4] A. Bonetti,et al. Preliminary Characterization of Mitochondrial Genome of Melipona scutellaris, a Brazilian Stingless Bee , 2014, BioMed research international.
[5] Koichiro Tamura,et al. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.
[6] P. Stadler,et al. MITOS: improved de novo metazoan mitochondrial genome annotation. , 2013, Molecular phylogenetics and evolution.
[7] Fei Yang,et al. Analysis of three leafminers' complete mitochondrial genomes. , 2013, Gene.
[8] F. Baxendale,et al. A Molecular Key for the Identification of Blow Flies in Southeastern Nebraska * , 2013, Journal of forensic sciences.
[9] P. Batterham,et al. Beyond barcoding: a mitochondrial genomics approach to molecular phylogenetics and diagnostics of blowflies (Diptera: Calliphoridae). , 2012, Gene.
[10] D. Ray,et al. Survey Sequencing Reveals Elevated DNA Transposon Activity, Novel Elements, and Variation in Repetitive Landscapes among Vesper Bats , 2012, Genome biology and evolution.
[11] W. Pirovano,et al. The complete mitogenome of Cylindrus obtusus (Helicidae, Ariantinae) using Illumina next generation sequencing , 2012, BMC Genomics.
[12] A. Austin,et al. The first mitochondrial genome for the wasp superfamily Platygastroidea: the egg parasitoid Trissolcus basalis. , 2012, Genome.
[13] D. Yeates,et al. The complete mitochondrial genome of the flesh fly, Sarcophaga impatiens Walker (Diptera: Sarcophagidae) , 2012, Mitochondrial DNA.
[14] D. Ray,et al. Complete mitochondrial genome sequences of three bats species and whole genome mitochondrial analyses reveal patterns of codon bias and lend support to a basal split in Chiroptera. , 2012, Gene.
[15] Jifeng Cai,et al. Identification of Forensically Important Sarcophagid Flies (Diptera: Sarcophagidae) in China, Based on COI and 16S rDNA Gene Sequences * , 2011, Journal of forensic sciences.
[16] D. Yeates,et al. The complete mitochondrial genome of the gall-forming fly, Fergusonina taylori Nelson and Yeates (Diptera: Fergusoninidae) , 2011, Mitochondrial DNA.
[17] M. Nei,et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. , 2011, Molecular biology and evolution.
[18] R. Stevens,et al. Rapid development and screening of microsatellite loci for Artibeus lituratus and their utility for six related species within Phyllostomidae , 2011, Molecular ecology resources.
[19] J. Stevens,et al. The molecular systematics of blowflies and screwworm flies (Diptera: Calliphoridae) using 28S rRNA, COX1 and EF-1α: insights into the evolution of dipteran parasitism , 2011, Parasitology.
[20] J. Wells,et al. Chrysomyinae (Diptera: Calliphoridae) is monophyletic: a molecular systematic analysis , 2011 .
[21] J. Wells,et al. Molecular phylogeny of the blowfly genus Chrysomya , 2011, Medical and veterinary entomology.
[22] M. Batzer,et al. Complete mitochondrial genome sequences of three Crocodylus species and their comparison within the Order Crocodylia. , 2011, Gene.
[23] Jian-Qun Chen,et al. Codon usage bias and determining forces in green plant mitochondrial genomes. , 2011, Journal of integrative plant biology.
[24] Markus Friedrich,et al. Episodic radiations in the fly tree of life , 2011, Proceedings of the National Academy of Sciences.
[25] C. Mayer,et al. The mitochondrial genome of Colossendeis megalonyx supports a basal position of Colossendeidae within the Pycnogonida. , 2011, Molecular phylogenetics and evolution.
[26] M. Pfenninger,et al. The complete mitochondrial genome of Radix balthica (Pulmonata, Basommatophora), obtained by low coverage shot gun next generation sequencing. , 2010, Molecular phylogenetics and evolution.
[27] J. Boore,et al. Domestication of olive fly through a multi-regional host shift to cultivated olives: comparative dating using complete mitochondrial genomes. , 2010, Molecular phylogenetics and evolution.
[28] A. Vogler,et al. Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics , 2010, Nucleic acids research.
[29] D. Otranto,et al. The mitochondrial genome of the common cattle grub, Hypoderma lineatum , 2010, Medical and veterinary entomology.
[30] S. Sorokina,et al. Comparative analysis of the mitochondrial genomes in Drosophila virilis species group (Diptera: Drosophilidae) , 2010 .
[31] Wanjun Gu,et al. Rapid identification of thousands of copperhead snake (Agkistrodon contortrix) microsatellite loci from modest amounts of 454 shotgun genome sequence , 2010, Molecular ecology resources.
[32] B. Ottenwälder,et al. Expression profiling of Drosophila mitochondrial genes via deep mRNA sequencing , 2009, Nucleic acids research.
[33] David A. Rasmussen,et al. What can you do with 0.1× genome coverage? A case study based on a genome survey of the scuttle fly Megaselia scalaris (Phoridae) , 2009, BMC Genomics.
[34] F. You,et al. The complete mitochondrial genome of the large yellow croaker, Larimichthys crocea (Perciformes, Sciaenidae): unusual features of its control region and the phylogenetic position of the Sciaenidae. , 2009, Gene.
[35] M. Whiting,et al. Mitochondrial genome organization and phylogeny of two vespid wasps. , 2008, Genome.
[36] P. Feijão,et al. Structure and evolution of the mitochondrial genomes of Haematobia irritans and Stomoxys calcitrans: the Muscidae (Diptera: Calyptratae) perspective. , 2008, Molecular phylogenetics and evolution.
[37] G. Duarte,et al. The Mitochondrial Control Region of Blowflies (Diptera: Calliphoridae): A Hot Spot for Mitochondrial Genome Rearrangements , 2008, Journal of medical entomology.
[38] P. Higgs,et al. Codon usage in mitochondrial genomes: distinguishing context-dependent mutation from translational selection. , 2008, Molecular biology and evolution.
[39] Björn Canbäck,et al. ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences , 2008, Bioinform..
[40] Robin B Gasser,et al. Using 454 technology for long-PCR based sequencing of the complete mitochondrial genome from single Haemonchus contortus (Nematoda) , 2008, BMC Genomics.
[41] Pavel Neumann,et al. Repetitive DNA in the pea (Pisum sativum L.) genome: comprehensive characterization using 454 sequencing and comparison to soybean and Medicago truncatula , 2007, BMC Genomics.
[42] Christoph Mayer,et al. Visualizing differences in phylogenetic information content of alignments and distinction of three classes of long-branch effects , 2007, BMC Evolutionary Biology.
[43] Jun Li,et al. KaKs_Calculator: Calculating Ka and Ks Through Model Selection and Model Averaging , 2007, Genom. Proteom. Bioinform..
[44] M. Whiting,et al. A mitochondrial genome phylogeny of Diptera: whole genome sequence data accurately resolve relationships over broad timescales with high precision , 2007 .
[45] N. Léger,et al. Evidence for multiple reversals of asymmetric mutational constraints during the evolution of the mitochondrial genome of metazoa, and consequences for phylogenetic inferences. , 2005, Systematic biology.
[46] P. Arruda,et al. The mitochondrial genome of the blowfly Chrysomya chloropyga (Diptera: Calliphoridae). , 2004, Gene.
[47] J. Townsend,et al. Mitochondrial genome size variation in New World and Old World populations of Drosophila melanogaster , 2004, Heredity.
[48] K. Strimmer,et al. TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics , 2004, BMC Evolutionary Biology.
[49] Robert C. Edgar,et al. MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.
[50] F. Frati,et al. The mitochondrial genome of the olive fly Bactrocera oleae: two haplotypes from distant geographical locations , 2003, Insect molecular biology.
[51] H. Kishino,et al. Time flies, a new molecular time-scale for brachyceran fly evolution without a clock. , 2003, Systematic biology.
[52] John P. Huelsenbeck,et al. MRBAYES: Bayesian inference of phylogenetic trees , 2001, Bioinform..
[53] P. Arruda,et al. The mitochondrial genome of the primary screwworm fly Cochliomyia hominivorax (Diptera: Calliphoridae) , 2000, Insect molecular biology.
[54] J. Ballard,et al. Comparative Genomics of Mitochondrial DNA in Members of the Drosophila melanogaster Subgroup , 2000, Journal of Molecular Evolution.
[55] J. Avise. Phylogeography: The History and Formation of Species , 2000 .
[56] C. Farr,et al. Drosophila melanogaster mitochondrial DNA: completion of the nucleotide sequence and evolutionary comparisons , 1995, Insect molecular biology.
[57] N. Perna,et al. Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes , 1995, Journal of Molecular Evolution.
[58] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[59] D. Wolstenholme,et al. The ribosomal RNA genes of Drosophila mitochondrial DNA. , 1985, Nucleic acids research.
[60] Julio Montoya,et al. tRNA punctuation model of RNA processing in human mitochondria , 1981, Nature.
[61] G. Attardi,et al. The tRNA genes punctuate the reading of genetic information in human mitochondrial DNA , 1980, Cell.
[62] J. Johnston,et al. Genome Sizes of Forensically Relevant Diptera , 2012, Journal of medical entomology.
[63] A. Beckenbach,et al. Insect mitochondrial genomics 3: the complete mitochondrial genome sequences of representatives from two neuropteroid orders: a dobsonfly (order Megaloptera) and a giant lacewing and an owlfly (order Neuroptera). , 2009, Genome.
[64] Douglas O. Clary,et al. The mitochondrial DNA molecule ofDrosophila yakuba: Nucleotide sequence, gene organization, and genetic code , 2005, Journal of Molecular Evolution.
[65] Z. Yang,et al. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. , 2000, Molecular biology and evolution.
[66] W. Brown,et al. EVOLUTION OF ANIMAL MITOCHONDRIAL DNA: RELEVANCE FOR POPULATION BIOLOGY AND SYSTEMATICS , 1987 .