Information-theoretic characterization of blood panel predictors for brain atrophy and cognitive decline in the elderly

Cognitive decline in old age is tightly linked with brain atrophy, causing significant burden. It is critical to identify which biomarkers are most predictive of cognitive decline and brain atrophy in the elderly. In 566 older adults from the Alzheimer's Disease Neuroimaging Initiative (ADNI), we used a novel unsupervised machine learning approach to evaluate an extensive list of more than 200 potential brain, blood and cerebrospinal fluid (CSF)-based predictors of cognitive decline. The method, called CorEx, discovers groups of variables with high multivariate mutual information and then constructs latent factors that explain these correlations. The approach produces a hierarchical structure and the predictive power of biological variables and latent factors are compared with regression. We found that a group of variables containing the well-known AD risk gene APOE and CSF tau and amyloid levels were highly correlated. This latent factor was the most predictive of cognitive decline and brain atrophy.

[1]  Michael W. Weiner,et al.  Empowering imaging biomarkers of Alzheimer's disease , 2015, Neurobiology of Aging.

[2]  Aram Galstyan,et al.  Discovering Structure in High-Dimensional Data Through Correlation Explanation , 2014, NIPS.

[3]  Derick R. Peterson,et al.  Plasma phospholipids identify antecedent memory impairment in older adults , 2014, Nature Medicine.

[4]  M. Chong,et al.  Preclinical Alzheimer's disease: diagnosis and prediction of progression , 2005, The Lancet Neurology.

[5]  Michael Weiner,et al.  Maximizing power to track Alzheimer's disease and MCI progression by LDA-based weighting of longitudinal ventricular surface features , 2013, NeuroImage.

[6]  Aram Galstyan,et al.  Maximally Informative Hierarchical Representations of High-Dimensional Data , 2014, AISTATS.

[7]  L. Guse,et al.  An examination of psychometric properties of the mini-mental state examination and the standardized mini-mental state examination: implications for clinical practice. , 2000, Applied nursing research : ANR.

[8]  Mehdi Farhoudi,et al.  Association of apolipoprotein E epsilon 4 allele with sporadic late onset Alzheimer`s disease. A meta-analysis. , 2012, Neurosciences.

[9]  C. Jack,et al.  Comparison of different MRI brain atrophy rate measures with clinical disease progression in AD , 2004, Neurology.

[10]  Nick C Fox,et al.  The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods , 2008, Journal of magnetic resonance imaging : JMRI.

[11]  S. Sadigh-Eteghad,et al.  Association of apolipoprotein E epsilon 4 allele with sporadic late onset Alzheimer's disease , 2012 .

[12]  Paul M. Thompson,et al.  Statistical Properties of Jacobian Maps and the Realization of Unbiased Large-Deformation Nonlinear Image Registration , 2007, IEEE Transactions on Medical Imaging.

[13]  Hilkka Soininen,et al.  Relationship between apoE genotype and CSF β-amyloid (1–42) and tau in patients with probable and definite Alzheimer’s disease , 2000, Neurobiology of Aging.

[14]  Michael Weiner,et al.  Unbiased tensor-based morphometry: Improved robustness and sample size estimates for Alzheimer's disease clinical trials , 2013, NeuroImage.

[15]  Norbert Schuff,et al.  Longitudinal stability of MRI for mapping brain change using tensor-based morphometry , 2006, NeuroImage.

[16]  Henry Rusinek,et al.  Regional brain atrophy rate predicts future cognitive decline: 6-year longitudinal MR imaging study of normal aging. , 2003, Radiology.