Paroxetine Administration Affects Microbiota and Bile Acid Levels in Mice

Recent interest in the role of microbiota in health and disease has implicated gut microbiota dysbiosis in psychiatric disorders including major depressive disorder. Several antidepressant drugs that belong to the class of selective serotonin reuptake inhibitors have been found to display antimicrobial activities. In fact, one of the first antidepressants discovered serendipitously in the 1950s, the monoamine-oxidase inhibitor Iproniazid, was a drug used for the treatment of tuberculosis. In the current study we chronically treated DBA/2J mice for 2 weeks with paroxetine, a selective serotonin reuptake inhibitor, and collected fecal pellets as a proxy for the gut microbiota from the animals after 7 and 14 days. Behavioral testing with the forced swim test revealed significant differences between paroxetine- and vehicle-treated mice. Untargeted mass spectrometry and 16S rRNA profiling of fecal pellet extracts showed several primary and secondary bile acid level, and microbiota alpha diversity differences, respectively between paroxetine- and vehicle-treated mice, suggesting that microbiota functions are altered by the drug. In addition to their lipid absorbing activities bile acids have important signaling activities and have been associated with gastrointestinal diseases and colorectal cancer. Antidepressant drugs like paroxetine should therefore be used with caution to prevent undesirable side effects.

[1]  Julie C. Lumeng,et al.  Global chemical effects of the microbiome include new bile-acid conjugations , 2020, Nature.

[2]  Mitchell H. Murdock,et al.  The microbiota regulate neuronal function and fear extinction learning , 2019, Nature.

[3]  I. Heuser,et al.  Minocycline alters behavior, microglia and the gut microbiome in a trait-anxiety-dependent manner , 2019, Translational Psychiatry.

[4]  Young-Mo Kim,et al.  Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice , 2019, Cell.

[5]  T. Dinan,et al.  Psychotropics and the Microbiome: a Chamber of Secrets… , 2019, Psychopharmacology.

[6]  R. Evans,et al.  FXR Regulates Intestinal Cancer Stem Cell Proliferation , 2019, Cell.

[7]  M. Slopianka,et al.  Analysis of metabolome changes in the bile acid pool in feces and plasma of antibiotic‐treated rats , 2019, Toxicology and Applied Pharmacology.

[8]  Mingxun Wang,et al.  Qiita: rapid, web-enabled microbiome meta-analysis , 2018, Nature Methods.

[9]  C. Nemeroff,et al.  Common genes associated with antidepressant response in mouse and man identify key role of glucocorticoid receptor sensitivity , 2017, PLoS biology.

[10]  Shuzhao Li,et al.  One Step Forward for Reducing False Positive and False Negative Compound Identifications from Mass Spectrometry Metabolomics Data: New Algorithms for Constructing Extracted Ion Chromatograms and Detecting Chromatographic Peaks. , 2017, Analytical chemistry.

[11]  E. Hsiao,et al.  The Microbiome and Host Behavior. , 2017, Annual review of neuroscience.

[12]  Chun Yang,et al.  Bifidobacterium in the gut microbiota confer resilience to chronic social defeat stress in mice , 2017, Scientific Reports.

[13]  C. Turck,et al.  Delineation of molecular pathway activities of the chronic antidepressant treatment response suggests important roles for glutamatergic and ubiquitin–proteasome systems , 2017, Translational Psychiatry.

[14]  David A. Ross,et al.  More Than a Gut Feeling: The Implications of the Gut Microbiota in Psychiatry , 2017, Biological Psychiatry.

[15]  J. Quevedo,et al.  Antidepressants, antimicrobials or both? Gut microbiota dysbiosis in depression and possible implications of the antimicrobial effects of antidepressant drugs for antidepressant effectiveness. , 2017, Journal of affective disorders.

[16]  P. Cotter,et al.  Short bowel syndrome (SBS)‐associated alterations within the gut‐liver axis evolve early and persist long‐term in the piglet model of short bowel syndrome , 2016, Journal of gastroenterology and hepatology.

[17]  C. Turck,et al.  Purine and pyrimidine metabolism: Convergent evidence on chronic antidepressant treatment response in mice and humans , 2016, Scientific Reports.

[18]  M. Ota,et al.  Possible association of Bifidobacterium and Lactobacillus in the gut microbiota of patients with major depressive disorder. , 2016, Journal of affective disorders.

[19]  H. Sokol,et al.  Interplay between bile acid metabolism and microbiota in irritable bowel syndrome , 2016, Neurogastroenterology and motility : the official journal of the European Gastrointestinal Motility Society.

[20]  Marco Y. Hein,et al.  The Perseus computational platform for comprehensive analysis of (prote)omics data , 2016, Nature Methods.

[21]  J Licinio,et al.  Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host’s metabolism , 2016, Molecular Psychiatry.

[22]  J. Raes,et al.  Population-level analysis of gut microbiome variation , 2016, Science.

[23]  T. Dinan,et al.  Mood by microbe: towards clinical translation , 2016, Genome Medicine.

[24]  V. Young,et al.  Antibiotic-Induced Alterations of the Gut Microbiota Alter Secondary Bile Acid Production and Allow for Clostridium difficile Spore Germination and Outgrowth in the Large Intestine , 2016, mSphere.

[25]  M. Wong,et al.  Inflammasome signaling affects anxiety- and depressive-like behavior and gut microbiome composition , 2015, Molecular Psychiatry.

[26]  Bing Ruan,et al.  Altered fecal microbiota composition in patients with major depressive disorder , 2015, Brain, Behavior, and Immunity.

[27]  S. Mazmanian,et al.  Review Control of Brain Development, Function, and Behavior by the Microbiome Figure 2. Microbiome Influence on Bbb Integrity , 2022 .

[28]  J. Bajaj,et al.  The human gut sterolbiome: bile acid-microbiome endocrine aspects and therapeutics , 2015, Acta pharmaceutica Sinica. B.

[29]  Catherine Brahic,et al.  Chamber of secrets , 2014 .

[30]  R. Knight,et al.  Gut Microbes and the Brain: Paradigm Shift in Neuroscience , 2014, The Journal of Neuroscience.

[31]  T. Dinan,et al.  Minireview: Gut microbiota: the neglected endocrine organ. , 2014, Molecular endocrinology.

[32]  A. Feinberg,et al.  DNA methylation in cancer: three decades of discovery , 2014, Genome Medicine.

[33]  M. Nieuwdorp,et al.  Role of the microbiome in energy regulation and metabolism. , 2014, Gastroenterology.

[34]  P. Hylemon,et al.  Bile acids and the gut microbiome , 2014, Current opinion in gastroenterology.

[35]  John F. Cryan,et al.  Immune modulation of the brain-gut-microbe axis , 2014, Front. Microbiol..

[36]  P. Wong,et al.  Metabolic tinkering by the gut microbiome , 2014, Gut microbes.

[37]  Satya Prakash,et al.  The human microbiome and bile acid metabolism: dysbiosis, dysmetabolism, disease and intervention , 2014, Expert opinion on biological therapy.

[38]  M. Camilleri Advances in understanding of bile acid diarrhea , 2014, Expert review of gastroenterology & hepatology.

[39]  J. Cryan,et al.  Microbial genes, brain & behaviour – epigenetic regulation of the gut–brain axis , 2014, Genes, brain, and behavior.

[40]  T. Dinan,et al.  Gut Microbiota: The Neglected Endocrine Organ , 2014 .

[41]  J. Bienenstock,et al.  Vagal pathways for microbiome-brain-gut axis communication. , 2014, Advances in experimental medicine and biology.

[42]  M. Lyte Microbial Endocrinology in the Microbiome-Gut-Brain Axis: How Bacterial Production and Utilization of Neurochemicals Influence Behavior , 2013, PLoS pathogens.

[43]  T. Dinan,et al.  Melancholic microbes: a link between gut microbiota and depression? , 2013, Neurogastroenterology and motility : the official journal of the European Gastrointestinal Motility Society.

[44]  P. Gibson,et al.  Republished: Drug-induced gastrointestinal disorders , 2013, Postgraduate Medical Journal.

[45]  P. Edwards,et al.  Pleiotropic roles of bile acids in metabolism. , 2013, Cell metabolism.

[46]  F. Holsboer,et al.  Proteomic and metabolomic profiling reveals time-dependent changes in hippocampal metabolism upon paroxetine treatment and biomarker candidates. , 2013, Journal of psychiatric research.

[47]  M. Krasowski,et al.  Microbial biotransformations of bile acids as detected by electrospray mass spectrometry. , 2013, Advances in nutrition.

[48]  M. Surette,et al.  The interplay between the intestinal microbiota and the brain , 2012, Nature Reviews Microbiology.

[49]  H. Sokol,et al.  Connecting dysbiosis, bile-acid dysmetabolism and gut inflammation in inflammatory bowel diseases , 2012, Gut.

[50]  T. Dinan,et al.  Mind-altering Microorganisms: the Impact of the Gut Microbiota on Brain and Behaviour , 2022 .

[51]  Natalie I. Tasman,et al.  A Cross-platform Toolkit for Mass Spectrometry and Proteomics , 2012, Nature Biotechnology.

[52]  C W Turck,et al.  Metabolite profiling of antidepressant drug action reveals novel drug targets beyond monoamine elevation , 2011, Translational Psychiatry.

[53]  J. Foster,et al.  Reduced anxiety‐like behavior and central neurochemical change in germ‐free mice , 2011, Neurogastroenterology and motility : the official journal of the European Gastrointestinal Motility Society.

[54]  N. McKenna,et al.  Combined deletion of Fxr and Shp in mice induces Cyp17a1 and results in juvenile onset cholestasis. , 2011, The Journal of clinical investigation.

[55]  H. Jaeschke,et al.  Bile acids induce inflammatory genes in hepatocytes: a novel mechanism of inflammation during obstructive cholestasis. , 2011, The American journal of pathology.

[56]  E. Want,et al.  Systemic gut microbial modulation of bile acid metabolism in host tissue compartments , 2010, Proceedings of the National Academy of Sciences.

[57]  Matej Oresic,et al.  MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data , 2010, BMC Bioinformatics.

[58]  P. Dent,et al.  Bile acids as regulatory molecules , 2009, Journal of Lipid Research.

[59]  Y. Alnouti Bile Acid sulfation: a pathway of bile acid elimination and detoxification. , 2009, Toxicological sciences : an official journal of the Society of Toxicology.

[60]  B. Bouscarel,et al.  Bile acids and signal transduction: role in glucose homeostasis. , 2008, Cellular signalling.

[61]  Johan Auwerx,et al.  Targeting bile-acid signalling for metabolic diseases , 2008, Nature Reviews Drug Discovery.

[62]  F. Holsboer,et al.  Profiling of behavioral changes and hippocampal gene expression in mice chronically treated with the SSRI paroxetine , 2008, Psychopharmacology.

[63]  B. Lebowitz,et al.  Evaluation of outcomes with citalopram for depression using measurement-based care in STAR*D: implications for clinical practice. , 2006, The American journal of psychiatry.

[64]  R. Knight,et al.  UniFrac: a New Phylogenetic Method for Comparing Microbial Communities , 2005, Applied and Environmental Microbiology.

[65]  D. Russell The enzymes, regulation, and genetics of bile acid synthesis. , 2003, Annual review of biochemistry.

[66]  Y. Benno,et al.  Clostridium hiranonis sp. nov., a human intestinal bacterium with bile acid 7alpha-dehydroxylating activity. , 2001, International journal of systematic and evolutionary microbiology.

[67]  M. Fava,et al.  Partial response, nonresponse, and relapse with selective serotonin reuptake inhibitors in major depression: a survey of current "next-step" practices. , 2000, The Journal of clinical psychiatry.

[68]  Y. Benno,et al.  Assignment of Eubacterium sp. VPI 12708 and related strains with high bile acid 7alpha-dehydroxylating activity to Clostridium scindens and proposal of Clostridium hylemonae sp. nov., isolated from human faeces. , 2000, International journal of systematic and evolutionary microbiology.

[69]  J. Muñoz-Bellido,et al.  Antimicrobial activity of psychotropic drugs: selective serotonin reuptake inhibitors. , 2000, International journal of antimicrobial agents.

[70]  Robert Walgate,et al.  Proliferation , 1985, Nature.

[71]  Otto D. Payton,et al.  Implications for Clinical Practice , 1983 .