Importin 8 Regulates the Transport of Mature MicroRNAs into the Cell Nucleus*

Background: The mechanism underlying the re-entering of mature miRNAs into the nucleus remains unknown. Results: IPO8 mediates the transport of mature miRNAs into the nucleus through binding to Ago2. Conclusion: IPO8 is a candidate carrier for nuclear import of mature miRNAs. Significance: This finding extends the gene regulatory network of miRNAs. Mature microRNAs (miRNAs), ∼22-nucleotide noncoding RNAs regulating target gene expression at the post-transcriptional level, have been recently shown to be transported into the nucleus where they modulate the biogenesis of other miRNAs or their own expression. However, the mechanism that governs the transport of mature miRNAs from cytoplasm to nucleus remains unknown. Here, we report that importin 8 (IPO8), a member of the karyopherin β (also named the protein import receptor importin β) family, plays a critical role in mediating the cytoplasm-to-nucleus transport of mature miRNAs. Specifically knocking down IPO8 but not other karyopherin β family proteins via siRNA significantly decreases the nuclear transport of various known nucleus-enriched miRNAs without affecting their total cellular levels. IPO8-mediated nuclear transport of mature miRNAs is also dependent on the association of IPO8 with the Argonaute 2 (Ago2) complex. Cross-immunoprecipitation and Western blot analysis show that IPO8 is physically associated with Ago2. Knocking down IPO8 via siRNA markedly decreases the nuclear transport of Ago2 but does not affect the total cellular Ago2 level. Furthermore, dissociating the binding of miRNAs with Ago2 by trypaflavine strongly reduces the IPO8-mediated nuclear transport of miRNAs.

[1]  G. Meister,et al.  Fluorescence correlation spectroscopy and fluorescence cross-correlation spectroscopy reveal the cytoplasmic origination of loaded nuclear RISC in vivo in human cells , 2008, Nucleic acids research.

[2]  T. Rana,et al.  Specific and potent RNAi in the nucleus of human cells , 2005, Nature Structural &Molecular Biology.

[3]  X. Chen,et al.  Argonaute 2 Complexes Selectively Protect the Circulating MicroRNAs in Cell-Secreted Microvesicles , 2012, PloS one.

[4]  A. F. Bochner,et al.  An Argonaute Transports siRNAs from the Cytoplasm to the Nucleus , 2008, Science.

[5]  F. Bischoff,et al.  Dominant‐negative mutants of importin‐β block multiple pathways of import and export through the nuclear pore complex , 1997, The EMBO journal.

[6]  G. Dreyfuss,et al.  Transport of Proteins and RNAs in and out of the Nucleus , 1999, Cell.

[7]  Kuan-Teh Jeang,et al.  Identification of Small Molecules That Suppress MicroRNA Function and Reverse Tumorigenesis* , 2010, The Journal of Biological Chemistry.

[8]  Petra Schwille,et al.  Importin 8 Is a Gene Silencing Factor that Targets Argonaute Proteins to Distinct mRNAs , 2009, Cell.

[9]  D. Bartel MicroRNAs Genomics, Biogenesis, Mechanism, and Function , 2004, Cell.

[10]  A. Dickmanns,et al.  A Role for RanBP1 in the Release of CRM1 from the Nuclear Pore Complex in a Terminal Step of Nuclear Export , 1999, The Journal of cell biology.

[11]  K. Zen,et al.  Mouse miRNA-709 directly regulates miRNA-15a/16-1 biogenesis at the posttranscriptional level in the nucleus: evidence for a microRNA hierarchy system , 2011, Cell Research.

[12]  Hui Zhou,et al.  Deep Sequencing of Human Nuclear and Cytoplasmic Small RNAs Reveals an Unexpectedly Complex Subcellular Distribution of miRNAs and tRNA 3′ Trailers , 2010, PloS one.

[13]  Satoshi Shibata,et al.  A High-Resolution Structure of the Pre-microRNA Nuclear Export Machinery , 2009, Science.

[14]  U. Kutay,et al.  Transport between the cell nucleus and the cytoplasm. , 1999, Annual review of cell and developmental biology.

[15]  E. Wentzel,et al.  A Hexanucleotide Element Directs MicroRNA Nuclear Import , 2007, Science.

[16]  A. Pasquinelli,et al.  Auto-regulation of miRNA biogenesis by let-7 and Argonaute , 2012, Nature.

[17]  Satoshi Shibata,et al.  Exportin-5 orthologues are functionally divergent among species , 2006, Nucleic acids research.

[18]  G. Blobel,et al.  The peptide repeat domain of nucleoporin Nup98 functions as a docking site in transport across the nuclear pore complex , 1995, Cell.

[19]  Karsten König,et al.  Trafficking of mature miRNA-122 into the nucleus of live liver cells. , 2009, Current pharmaceutical biotechnology.

[20]  U. Kutay,et al.  Nuclear Export of MicroRNA Precursors , 2004, Science.

[21]  T. Pederson,et al.  MicroRNA-206 colocalizes with ribosome-rich regions in both the nucleolus and cytoplasm of rat myogenic cells , 2006, Proceedings of the National Academy of Sciences.

[22]  T. Tuschl,et al.  Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs. , 2004, Molecular cell.