FCMPASS Software Aids Extracellular Vesicle Light Scatter Standardization

The study of extracellular vesicles (EVs) is a rapidly growing field due to their great potential in many areas of clinical medicine including diagnostics, prognostics, theranostics, and therapeutics. Flow cytometry is currently one of the most popular methods of analyzing EVs due to it being a high‐throughput, multiparametric technique, that is readily available in the majority of research labs. Despite its wide use, few commercial flow cytometers are designed specifically for the detection of EVs. Many flow cytometers used for EV analysis are working at their detection limits and are unable to detect the majority of EVs. Currently, very little standardization exists for EV flow cytometry, which is an issue because flow cytometers vary considerably in the way they collect scattered or fluorescent light from particles being interrogated. This makes published research hard to interpret, compare, and in some cases, impossible to reproduce. Here we demonstrate a method of flow cytometer light scatter standardization, utilizing flow cytometer postacquisition analysis software (FCMPASS). FCMPASS is built upon Mie theory and enables the approximation of flow cytometer geometric parameters either by analyzing beads of known diameter and refractive index or by inputting the collection angle if known. The software is then able to create a scatter‐diameter curve and scatter‐refractive index curve that enables researchers to convert scattering data and instrument sensitivity into standardized units. Furthermore, with the correct controls, light scatter data can be converted to diameter distributions or refractive index distributions. FCMPASS therefore offers a freely available and ergonomic method of standardizing and further extending EV characterization using flow cytometry.

[1]  G. Mie Beiträge zur Optik trüber Medien, speziell kolloidaler Metallösungen , 1908 .

[2]  V. Subramaniam,et al.  Refractive index sensing of green fluorescent proteins in living cells using fluorescence lifetime imaging microscopy. , 2008, Biophysical journal.

[3]  P. Barber Absorption and scattering of light by small particles , 1984 .

[4]  John P. Nolan,et al.  High sensitivity flow cytometry of membrane vesicles , 2016, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[5]  Chris Gardiner,et al.  Measurement of refractive index by nanoparticle tracking analysis reveals heterogeneity in extracellular vesicles , 2014, Journal of extracellular vesicles.

[6]  Thomas Behrenbeck,et al.  Characterization of blood borne microparticles as markers of premature coronary calcification in newly menopausal women. , 2008, American journal of physiology. Heart and circulatory physiology.

[7]  J Beuthan,et al.  The spatial variation of the refractive index in biological cells. , 1996, Physics in medicine and biology.

[8]  A. Quaranta,et al.  Use of silica microspheres having refractive index similar to bacteria for conversion of flow cytometric forward light scatter into biovolume. , 2008, Water research.

[9]  Jennifer C. Jones,et al.  High-fidelity detection and sorting of nanoscale vesicles in viral disease and cancer , 2019, Journal of extracellular vesicles.

[10]  H. Beck-Nielsen,et al.  A flow cytometric method for characterization of circulating cell-derived microparticles in plasma , 2014, Journal of extracellular vesicles.

[11]  Jennifer C. Jones,et al.  Systematic Methodological Evaluation of a Multiplex Bead-Based Flow Cytometry Assay for Detection of Extracellular Vesicle Surface Signatures , 2018, Front. Immunol..

[12]  P. Bernard,et al.  Size and shape characterization of hydrated and desiccated exosomes , 2015, Analytical and Bioanalytical Chemistry.

[13]  Willem Stoorvogel,et al.  Fluorescent labeling of nano-sized vesicles released by cells and subsequent quantitative and qualitative analysis by high-resolution flow cytometry , 2012, Nature Protocols.

[14]  Elmar L. Gool,et al.  Absolute sizing and label-free identification of extracellular vesicles by flow cytometry. , 2018, Nanomedicine : nanotechnology, biology, and medicine.

[15]  M. V. van Gemert,et al.  Single vs. swarm detection of microparticles and exosomes by flow cytometry , 2012, Journal of thrombosis and haemostasis : JTH.

[16]  M. Krumrey,et al.  Hollow organosilica beads as reference particles for optical detection of extracellular vesicles , 2018, Journal of thrombosis and haemostasis : JTH.

[17]  T. V. van Leeuwen,et al.  Refractive index determination of nanoparticles in suspension using nanoparticle tracking analysis. , 2014, Nano letters.

[18]  M. Gelb,et al.  Detection and Quantification of Microparticles from Different Cellular Lineages Using Flow Cytometry. Evaluation of the Impact of Secreted Phospholipase A2 on Microparticle Assessment , 2015, PloS one.

[19]  R. Nieuwland,et al.  Biological reference materials for extracellular vesicle studies , 2017, European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences.

[20]  L. Arnaud,et al.  Standardization of platelet‐derived microparticle counting using calibrated beads and a Cytomics FC500 routine flow cytometer: a first step towards multicenter studies? , 2009, Journal of thrombosis and haemostasis : JTH.

[21]  Patrick C. N. Rensen,et al.  Cryo-electron microscopy of extracellular vesicles in fresh plasma , 2013, Journal of extracellular vesicles.

[22]  Christian Mätzler,et al.  MATLAB Functions for Mie Scattering and Absorption , 2002 .

[23]  I. Sargent,et al.  Particle size distribution of exosomes and microvesicles determined by transmission electron microscopy, flow cytometry, nanoparticle tracking analysis, and resistive pulse sensing , 2014, Journal of thrombosis and haemostasis : JTH.

[24]  Paul Harrison,et al.  Classification, Functions, and Clinical Relevance of Extracellular Vesicles , 2012, Pharmacological Reviews.

[25]  T. V. van Leeuwen,et al.  Standardization of extracellular vesicle measurements by flow cytometry through vesicle diameter approximation , 2018, Journal of thrombosis and haemostasis : JTH.

[26]  J. Baudry,et al.  Size and fluorescence measurements of individual droplets by flow cytometry , 2009 .