Segmentation of Overlapping Cervical Cells in Microscopic Images with Superpixel Partitioning and Cell-Wise Contour Refinement

Segmentation of cervical cells in microscopic images is an important task for computer-aided diagnosis of cervical cancer. However, their segmentation is challenging due to inhomogeneous cell cytoplasm and the overlap between the cells. In this paper, we propose an automatic segmentation method for multiple overlapping cervical cells in microscopic images using superpixel partitioning and cell-wise contour refinement. First, the cell masses are detected by superpixel generation and triangle thresholding. Then, nuclei of cells are extracted by local thresholding and outlier removal. Finally, cell cytoplasm is initially segmented by superpixel partitioning and refined by cell-wise contour refinement with graph cuts. In experiments, our method showed competitive performances in two public challenge data sets compared to the state-of-the-art methods.

[1]  Liu Jian,et al.  A variational approach on image segmentation , 2001 .

[2]  Pascal Fua,et al.  SLIC Superpixels Compared to State-of-the-Art Superpixel Methods , 2012, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[3]  Marie-Pierre Jolly,et al.  Interactive Graph Cuts for Optimal Boundary and Region Segmentation of Objects in N-D Images , 2001, ICCV.

[4]  Lawrence O. Hall,et al.  A new approach to detect and segment overlapping cells in multi-layer cervical cell volume images , 2016, 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI).

[5]  Gustavo Carneiro,et al.  An Improved Joint Optimization of Multiple Level Set Functions for the Segmentation of Overlapping Cervical Cells , 2015, IEEE Transactions on Image Processing.

[6]  Mads Nielsen,et al.  Computer Vision — ECCV 2002 , 2002, Lecture Notes in Computer Science.

[7]  Ghassan Hamarneh,et al.  Evaluation of Three Algorithms for the Segmentation of Overlapping Cervical Cells , 2017, IEEE Journal of Biomedical and Health Informatics.

[8]  Nikos Paragios,et al.  Shape Priors for Level Set Representations , 2002, ECCV.

[9]  Jiri Matas,et al.  Robust wide-baseline stereo from maximally stable extremal regions , 2004, Image Vis. Comput..

[10]  Lawrence O. Hall,et al.  AN APPROACH FOR OVERLAPPING CELL SEGMENTATION IN MULTI-LAYER CERVICAL CELL VOLUMES , 2015 .

[11]  Selim Aksoy,et al.  Unsupervised segmentation and classification of cervical cell images , 2012, Pattern Recognit..

[12]  Tony F. Chan,et al.  Active contours without edges , 2001, IEEE Trans. Image Process..

[13]  Claudia M. Carneiro,et al.  CELL RECONSTRUCTION UNDER VORONOI AND ENCLOSING ELLIPSES FROM 3 D MICROSCOPY , 2015 .

[14]  Daniela Ushizima,et al.  Segmentation of subcellular compartments combining superpixel representation with Voronoi diagrams , 2015 .

[15]  G. Wright,et al.  Evaluation Framework for Algorithms Segmenting Short Axis Cardiac MRI. , 2009, The MIDAS Journal.

[16]  Stefano Soatto,et al.  Quick Shift and Kernel Methods for Mode Seeking , 2008, ECCV.