Social Network Analysis of the Genetic Structure of Pacific Islanders

Social network analysis (SNA) is a body of theory and a set of relatively new computer‐aided techniques used in the analysis and study of relational data. Recent studies of autosomal markers from over 40 human populations in the south‐western Pacific have further documented the remarkable degree of genetic diversity in this part of the world. I report additional analysis using SNA methods contributing new controlled observations on the structuring of genetic diversity among these islanders. These SNA mappings are then compared with model‐based network expectations derived from the geographic distances among the same populations. Previous studies found that genetic divergence among island Melanesian populations is organised by island, island size/topography, and position (coastal vs. inland), and that similarities observed correlate only weakly with an isolation‐by‐distance model. Using SNA methods, however, improves the resolution of among population comparison, and suggests that isolation by distance constrained by social networks together with position (coastal/inland) accounts for much of the population structuring observed. The multilocus data now available is also in accord with current thinking on the impact of major biogeographical transformations on prehistoric colonisation and post‐settlement human interaction in Oceania.

[1]  F. Trillmich,et al.  Kin in space: social viscosity in a spatially and genetically substructured network , 2008, Proceedings of the Royal Society B: Biological Sciences.

[2]  Derek Williams PREHISTORY IN THE PACIFIC ISLANDS , 1991 .

[3]  Jonathan Scott Friedlaender,et al.  The Genetic Structure of Pacific Islanders , 2008, PLoS genetics.

[4]  J. Chappell Geographic changes of coastal lowlands in the Papuan past , 2005 .

[5]  P. Forster,et al.  A mitochondrial stratigraphy for island southeast Asia. , 2007, American journal of human genetics.

[6]  J. Terrell,et al.  The paradox of human population genetics at the end of the twentieth century , 1996 .

[7]  M. McSaveney,et al.  The 17 July 1998 tsunami, Papua New Guinea: evidence and initial interpretation , 2000 .

[8]  Koji Mizoguchi,et al.  Nodes and edges: A network approach to hierarchisation and state formation in Japan , 2009 .

[9]  J. Krause,et al.  Social network theory in the behavioural sciences: potential applications , 2007, Behavioral Ecology and Sociobiology.

[10]  Jonathan Scott Friedlaender,et al.  Genetic and Linguistic Coevolution in Northern Island Melanesia , 2008, PLoS genetics.

[11]  J. Terrell Causal pathways and causal processes: Studying the evolutionary prehistory of human diversity in language, customs, and biology , 1986 .

[12]  L. Sloan,et al.  Sea Level Change Through the Last Glacial Cycle , 2001 .

[13]  Jeong-Yoo Kim,et al.  Connectivity, stability and efficiency in a network as an information flow , 2007, Math. Soc. Sci..

[14]  John Edward Terrell,et al.  Environmental setting of human migrations in the circum‐Pacific region , 2007 .

[15]  R. Hanneman Introduction to Social Network Methods , 2001 .

[16]  J. Diniz‐Filho,et al.  Multiple Mantel tests and isolation-by-distance, taking into account long-term historical divergence. , 2005, Genetics and molecular research : GMR.

[17]  P. Swadling Changing shorelines and cultural orientations in the Sepik-Ramu, Papua New Guinea : implications for Pacific prehistory , 1997 .

[18]  Mark E. J. Newman,et al.  The Structure and Function of Complex Networks , 2003, SIAM Rev..

[19]  M E J Newman,et al.  Community structure in social and biological networks , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[20]  Edward M. Reingold,et al.  Graph drawing by force‐directed placement , 1991, Softw. Pract. Exp..

[21]  L. Excoffier,et al.  Surfing during population expansions promotes genetic revolutions and structuration. , 2008, Trends in ecology & evolution.

[22]  S. Kaplan Ethnological and biogeographical significance of pottery sherds from Nissan Island, Papua New Guinea / Susan Kaplan, Bryn Mawr College. , 1976 .

[23]  P. Wiessner,et al.  Prehistoric stone artefacts from Enga and the implication of links between the highlands, lowlands and islands for early agriculture in Papua New Guinea , 2008 .

[24]  J. Chappell,et al.  Post-glacial sea-level rise from a coral record at Huon Peninsula, Papua New Guinea , 1991, Nature.

[25]  Jonathan Scott Friedlaender,et al.  Melanesian mtDNA Complexity , 2007, PloS one.

[26]  R. Fairbanks A 17,000-year glacio-eustatic sea level record: influence of glacial melting rates on the Younger Dryas event and deep-ocean circulation , 1989, Nature.

[27]  T. Vincenty DIRECT AND INVERSE SOLUTIONS OF GEODESICS ON THE ELLIPSOID WITH APPLICATION OF NESTED EQUATIONS , 1975 .

[28]  J. Terrell Anthropological Knowledge and Scientific Fact , 2000 .

[29]  H. Voris Maps of Pleistocene sea levels in Southeast Asia: shorelines, river systems and time durations , 2000 .

[30]  P. Donnelly,et al.  Inference of population structure using multilocus genotype data. , 2000, Genetics.

[31]  Linton C. Freeman,et al.  Models and Methods in Social Network Analysis: Graphic Techniques for Exploring Social Network Data , 2001 .

[32]  J. Höglund,et al.  From connectivity to isolation: genetic consequences of population fragmentation in capercaillie across Europe , 2003, Molecular ecology.

[33]  Jacques van Helden,et al.  Network Analysis Tools: from biological networks to clusters and pathways , 2008, Nature Protocols.

[34]  N. Rosenberg distruct: a program for the graphical display of population structure , 2003 .

[35]  John Edward Terrell,et al.  ISLAND BIOGEOGRAPHY AND MAN IN MELANESIA , 1976 .

[36]  J. Terrell Human biogeography: evidence of our place in nature , 2006 .

[37]  W. Dickinson Paleoshoreline record of relative Holocene sea levels on Pacific islands , 2001 .

[38]  Daniel Nettle,et al.  Genetic and Linguistic Affinities between Human Populations in Eurasia and West Africa , 2003, Human biology.

[39]  K. Lambeck,et al.  Estimation of current plate motions in Papua New Guinea from Global Positioning System observations , 1998 .

[40]  J. Chappell Geology of Coral Terraces, Huon Peninsula, New Guinea: A Study of Quaternary Tectonic Movements and Sea-Level Changes , 1974 .

[41]  J. Relethford Global Patterns of Isolation by Distance Based on Genetic and Morphological Data , 2004, Human biology.

[42]  R. Hide,et al.  Changing landscape and social interaction: looking at agricultural history from a Sepik-Ramu perspective , 2005 .

[43]  Bernhard Voelkl,et al.  A social network analysis of primate groups , 2009, Primates.

[44]  R. Bailey,et al.  The tropical rain forest: Is it a productive environment for human foragers? , 1991 .

[45]  J. Specht Small islands in the big picture: the formative period of Lapita in the Bismarck Archipelago , 2007 .

[46]  S. Wichmann,et al.  Typological feature analysis models linguistic geography , 2011 .

[47]  Jonathan Scott Friedlaender Human Population Study. (Book Reviews: Patterns of Human Variation. The Demography, Genetics, and Phenetics of Bougainville Islanders) , 1975 .

[48]  F. Balloux,et al.  Geography is a better determinant of human genetic differentiation than ethnicity , 2005, Human Genetics.

[49]  John Scott Social Network Analysis , 1988 .

[50]  N. Eldredge,et al.  Phylogenetics and Material Cultural Evolution , 2007, Current Anthropology.

[51]  B S Weir,et al.  Estimation of the coancestry coefficient: basis for a short-term genetic distance. , 1983, Genetics.

[52]  Alan R. Templeton,et al.  Population Genetics and Microevolutionary Theory , 2006 .

[53]  Jennifer Golbeck,et al.  Spring-Embedded Graphs for Semantic Visualization , 2006, Visualizing the Semantic Web, 2nd Edition.

[54]  D. McDonald,et al.  Young-boy networks without kin clusters in a lek-mating manakin , 2009, Behavioral Ecology and Sociobiology.

[55]  Patrick C Phillips,et al.  Network thinking in ecology and evolution. , 2005, Trends in ecology & evolution.

[56]  Daniel J. Brass,et al.  Network Analysis in the Social Sciences , 2009, Science.

[57]  M. Glascock,et al.  Mid-Holocene Social Interaction in Melanesia: New Evidence from Hammer-Dressed Obsidian Stemmed Tools , 2009 .

[58]  M. Newman,et al.  The structure of scientific collaboration networks. , 2000, Proceedings of the National Academy of Sciences of the United States of America.