Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress
暂无分享,去创建一个
David J. Miller | D. Hayward | S. Forêt | Catalina Aguilar | D. Bourne | B. Lapeyre | J. Raina | David J. Miller | David J. Miller
[1] G. Wörheide,et al. Transcriptomic Resilience of the Montipora digitata Holobiont to Low pH , 2017, Front. Mar. Sci..
[2] David J. Miller,et al. Transcriptomic analysis of the response of Acropora millepora to hypo-osmotic stress provides insights into DMSP biosynthesis by corals , 2017, BMC Genomics.
[3] C. Li,et al. Abundant betaines in giant clams (Tridacnidae) and western Pacific reef corals, including study of coral betaine acclimatization , 2017 .
[4] J. Wiedenmann,et al. The role of floridoside in osmoadaptation of coral-associated algal endosymbionts to high-salinity conditions , 2017, Science Advances.
[5] M. Scheffer,et al. Coral reefs in the Anthropocene , 2017, Nature.
[6] Erik Cordes,et al. Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico , 2017, Front. Mar. Sci..
[7] S. Palumbi,et al. Early Transcriptional Responses during Heat Stress in the Coral Acropora hyacinthus , 2017, The Biological Bulletin.
[8] S. Palumbi,et al. Tidal heat pulses on a reef trigger a fine-tuned transcriptional response in corals to maintain homeostasis , 2017, Science Advances.
[9] M. Tippett,et al. Human influence on tropical cyclone intensity , 2016, Science.
[10] C. A. Hurtado. Transcriptomic analyses of the responses of corals to environmental stress , 2016 .
[11] O. Levy,et al. Gene expression profiles during short-term heat stress; branching vs. massive Scleractinian corals of the Red Sea , 2016, PeerJ.
[12] C. Voolstra,et al. Long‐term salinity tolerance is accompanied by major restructuring of the coral bacterial microbiome , 2016, Molecular ecology.
[13] D. Hayward,et al. Functional conservation of the apoptotic machinery from coral to man: the diverse and complex Bcl-2 and caspase repertoires of Acropora millepora , 2016, BMC Genomics.
[14] J. Pandolfi,et al. The cumulative impacts of repeated heavy rainfall, flooding and altered water quality on the high-latitude coral reefs of Hervey Bay, Queensland, Australia. , 2015, Marine pollution bulletin.
[15] D. Allemand,et al. Bicarbonate transporters in corals point towards a key step in the evolution of cnidarian calcification , 2015, Scientific Reports.
[16] J. Sun,et al. Proteomic basis of stress responses in the gills of the pacific oyster Crassostrea gigas. , 2015, Journal of proteome research.
[17] D. Hayward,et al. Rapid acclimation of juvenile corals to CO2‐mediated acidification by upregulation of heat shock protein and Bcl‐2 genes , 2015, Molecular ecology.
[18] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[19] S. Cook,et al. The role of MAPK signalling pathways in the response to endoplasmic reticulum stress. , 2014, Biochimica et biophysica acta.
[20] S. Goffredo,et al. Gene expression profiles during short‐term heat stress in the red sea coral Stylophora pistillata , 2014, Global change biology.
[21] Paul Theodor Pyl,et al. HTSeq—a Python framework to work with high-throughput sequencing data , 2014, bioRxiv.
[22] P. Galli,et al. The susceptibility of corals to thermal stress by analyzing Hsp60 expression. , 2014, Marine environmental research.
[23] T. Harder,et al. Gene Expression Patterns during the Early Stages of Chemically Induced Larval Metamorphosis and Settlement of the Coral Acropora millepora , 2014, PloS one.
[24] B. Willis,et al. DMSP biosynthesis by an animal and its role in coral thermal stress response , 2013, Nature.
[25] D. Bourne,et al. Transcriptional Activation of c3 and hsp70 as Part of the Immune Response of Acropora millepora to Bacterial Challenges , 2013, PloS one.
[26] Wei-Hua Wu,et al. Potassium transport and signaling in higher plants. , 2013, Annual review of plant biology.
[27] Cole Trapnell,et al. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions , 2013, Genome Biology.
[28] T. Oliver,et al. Genomic basis for coral resilience to climate change , 2013, Proceedings of the National Academy of Sciences.
[29] J. Valenzuela,et al. Proteomics of hyposaline stress in blue mussel congeners (genus Mytilus): implications for biogeographic range limits in response to climate change , 2012, Journal of Experimental Biology.
[30] G. De’ath,et al. The 27–year decline of coral cover on the Great Barrier Reef and its causes , 2012, Proceedings of the National Academy of Sciences.
[31] R. Berkelmans,et al. Salinity thresholds of Acropora spp. on the Great Barrier Reef , 2012, Coral Reefs.
[32] D. Allemand,et al. Cell Biology of Cnidarian-Dinoflagellate Symbiosis , 2012, Microbiology and Molecular Reviews.
[33] D. Hayward,et al. Whole Transcriptome Analysis of the Coral Acropora millepora Reveals Complex Responses to CO2‐driven Acidification during the Initiation of Calcification , 2012, Molecular ecology.
[34] S. Wijffels,et al. Ocean Salinities Reveal Strong Global Water Cycle Intensification During 1950 to 2000 , 2012, Science.
[35] K. Nagata,et al. Protein folding and quality control in the ER. , 2011, Cold Spring Harbor perspectives in biology.
[36] L. Ukani,et al. Differential Responses of the Coral Host and Their Algal Symbiont to Thermal Stress , 2011, PloS one.
[37] T. Harder,et al. Induction of Larval Metamorphosis of the Coral Acropora millepora by Tetrabromopyrrole Isolated from a Pseudoalteromonas Bacterium , 2011, PloS one.
[38] G. Somero,et al. Transcriptomic responses to salinity stress in invasive and native blue mussels (genus Mytilus) , 2011, Molecular ecology.
[39] Trey Ideker,et al. Cytoscape 2.8: new features for data integration and network visualization , 2010, Bioinform..
[40] L. Tomanek,et al. The proteomic response of the mussel congeners Mytilus galloprovincialis and M. trossulus to acute heat stress: implications for thermal tolerance limits and metabolic costs of thermal stress , 2010, Journal of Experimental Biology.
[41] G. Somero,et al. Transcriptomic responses to heat stress in invasive and native blue mussels (genus Mytilus): molecular correlates of invasive success , 2010, Journal of Experimental Biology.
[42] A. Tarrant,et al. Ocean Warming Slows Coral Growth in the Central Red Sea , 2010, Science.
[43] Devin Dersh,et al. GRP94 in ER quality control and stress responses. , 2010, Seminars in cell & developmental biology.
[44] C. Deser,et al. Global warming pattern formation: sea surface temperature and rainfall. , 2010 .
[45] G. Holland,et al. Tropical cyclones and climate change , 2010, Tropical Cyclone Research and Review.
[46] O. Hoegh‐Guldberg,et al. Early molecular responses of coral larvae to hyperthermal stress , 2009, Molecular ecology.
[47] R. Gates,et al. Betaines and Dimethylsulfoniopropionate as Major Osmolytes in Cnidaria with Endosymbiotic Dinoflagellates , 2009, Physiological and Biochemical Zoology.
[48] C. Downs,et al. Cellular pathology and histopathology of hypo-salinity exposure on the coral Stylophora pistillata. , 2009, The Science of the total environment.
[49] A. Chow,et al. Increased light intensity induces heat shock protein Hsp60 in coral species , 2009, Cell Stress and Chaperones.
[50] Audrey Kauffmann,et al. Bioinformatics Applications Note Arrayqualitymetrics—a Bioconductor Package for Quality Assessment of Microarray Data , 2022 .
[51] P. Glynn,et al. Climate change and coral reef bleaching: An ecological assessment of long-term impacts, recovery trends and future outlook , 2008 .
[52] M. Lesser. Oxidative stress in marine environments: biochemistry and physiological ecology. , 2006, Annual review of physiology.
[53] Martin Kuiper,et al. BiNGO: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks , 2005, Bioinform..
[54] P. Falkowski,et al. Membrane lipids of symbiotic algae are diagnostic of sensitivity to thermal bleaching in corals. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[55] D. Bellwood,et al. Confronting the coral reef crisis , 2004, Nature.
[56] D. Allemand,et al. Molecular cloning and localization of a PMCA P-type calcium ATPase from the coral Stylophora pistillata. , 2004, Biochimica et biophysica acta.
[57] A. Kerswell,et al. Effects of hypo-osmosis on the coral Stylophora pistillata: nature and cause of low-salinity bleaching¹ , 2003 .
[58] S. Pierce,et al. The Taurine Efflux Portal Used to Regulate Cell Volume in Response to Hypoosmotic Stress Seems to Be Similar in Many Cell Types: Lessons to Be Learned from Molluscan Red Blood Cells1 , 2001 .
[59] H. Bohnert,et al. PLANT CELLULAR AND MOLECULAR RESPONSES TO HIGH SALINITY. , 2000, Annual review of plant physiology and plant molecular biology.
[60] C. Folke,et al. Ecological goods and services of coral reef ecosystems , 1999 .
[61] R. Woesik,et al. Effects of Cyclone 'Joy' on nearshore coral communities of the Great Barrier Reef , 1995 .
[62] D. M. Dickson,et al. The role of β-dimethylsulphoniopropionate, glycine betaine and homarine in the osmoacclimation of Platymonas subcordiformis , 1986, Planta.
[63] G. Somero,et al. Biochemical Adaptation: Mechanism and Process in Physiological Evolution , 1984 .
[64] S. Pierce. INVERTEBRATE CELL VOLUME CONTROL MECHANISMS: A COORDINATED USE OF INTRACELLULAR AMINO ACIDS AND INORGANIC IONS AS OSMOTIC SOLUTE , 1982 .
[65] Michael Cowlin. Osmoregulation and the Anthozoan-Dinoflagellate Symbiosis , 2012 .
[66] Y. Jan,et al. Cloned potassium channels from eukaryotes and prokaryotes. , 1997, Annual review of neuroscience.
[67] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[68] A. Shinagawa,et al. The role of free amino acids and betaines in intracellular osmoregulation of marine sponges , 1992 .
[69] R. J. Hoffmann,et al. Hypoosmotic volume regulation in the sea anemone Metridium senile , 1988 .