Challenges in Large-Scale Computational Mass Spectrometry and Multiomics.

[1]  Bernhard Kuster,et al.  moCluster: Identifying Joint Patterns Across Multiple Omics Data Sets. , 2016, Journal of proteome research.

[2]  Henning Hermjakob,et al.  Testing and Validation of Computational Methods for Mass Spectrometry. , 2016, Journal of proteome research.

[3]  Lennart Martens,et al.  Pladipus Enables Universal Distributed Computing in Proteomics Bioinformatics. , 2016, Journal of proteome research.

[4]  Oliver Horlacher,et al.  Mining Large Scale Tandem Mass Spectrometry Data for Protein Modifications Using Spectral Libraries. , 2016, Journal of proteome research.

[5]  Chris Bielow,et al.  Proteomics Quality Control: Quality Control Software for MaxQuant Results. , 2016, Journal of proteome research.

[6]  Joshua E Elias,et al.  Application of de Novo Sequencing to Large-Scale Complex Proteomics Data Sets. , 2016, Journal of proteome research.

[7]  Christian Fufezan,et al.  Ursgal, Universal Python Module Combining Common Bottom-Up Proteomics Tools for Large-Scale Analysis. , 2016, Journal of proteome research.

[8]  Olga Vitek,et al.  From Correlation to Causality: Statistical Approaches to Learning Regulatory Relationships in Large-Scale Biomolecular Investigations. , 2016, Journal of proteome research.

[9]  Matthew The,et al.  MaRaCluster: A Fragment Rarity Metric for Clustering Fragment Spectra in Shotgun Proteomics. , 2016, Journal of proteome research.

[10]  Francesca Petralia,et al.  New Method for Joint Network Analysis Reveals Common and Different Coexpression Patterns among Genes and Proteins in Breast Cancer , 2016, Journal of proteome research.

[11]  Michael R. Shortreed,et al.  Human Proteomic Variation Revealed by Combining RNA-Seq Proteogenomics and Global Post-Translational Modification (G-PTM) Search Strategy , 2015, Journal of proteome research.

[12]  Qi Liu,et al.  Integrative Omics Analysis Reveals Post-Transcriptionally Enhanced Protective Host Response in Colorectal Cancers with Microsatellite Instability , 2015, Journal of proteome research.

[13]  David L. Tabb,et al.  Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts , 2015, Journal of proteome research.

[14]  David Fenyö,et al.  PGx: Putting Peptides to BED , 2015, Journal of proteome research.