Nuclear Receptors TR2 and TR4 Recruit Multiple Epigenetic Transcriptional Corepressors That Associate Specifically with the Embryonic β-Type Globin Promoters in Differentiated Adult Erythroid Cells
暂无分享,去创建一个
James Douglas Engel | Osamu Tanabe | Jeroen Demmers | Frank Grosveld | Lihong Shi | J. D. Engel | Jeroen A. A. Demmers | J. Strouboulis | F. Grosveld | Osamu Tanabe | Lihong Shi | Shuaiying Cui | N. Obara | Katarzyna E. Kolodziej | Shuaiying Cui | John Strouboulis | Naoshi Obara | Alexandra Amaral-Psarris | Alexandra Amaral-Psarris
[1] T. Townes,et al. KLF1 regulates BCL11A expression and γ- to β-globin gene switching , 2010, Nature Genetics.
[2] A. Bank,et al. Multiple hematopoietic defects and delayed globin switching in Ikaros null mice , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[3] H. Cao. Pharmacological Induction of Fetal Hemoglobin Synthesis using Histone Deacetylase Inhibitors , 2004, Hematology.
[4] J. D. Engel,et al. Embryonic and fetal β‐globin gene repression by the orphan nuclear receptors, TR2 and TR4 , 2007, The EMBO journal.
[5] Antoine H. F. M. Peters,et al. LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription , 2005, Nature.
[6] Min Gyu Lee,et al. Functional Interplay between Histone Demethylase and Deacetylase Enzymes , 2006, Molecular and Cellular Biology.
[7] E. Seto,et al. The orphan nuclear receptor TR2 interacts directly with both class I and class II histone deacetylases. , 2001, Molecular endocrinology.
[8] Stuart H. Orkin,et al. A protein interaction network for pluripotency of embryonic stem cells , 2006, Nature.
[9] Li-Na Wei,et al. Cloning and Characterization of Mouse RIP140, a Corepressor for Nuclear Orphan Receptor TR2 , 1998, Molecular and Cellular Biology.
[10] S. Baylin,et al. DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci , 2000, Nature Genetics.
[11] Ping-Chih Ho,et al. HDAC3 as a Molecular Chaperone for Shuttling Phosphorylated TR2 to PML: A Novel Deacetylase Activity-Independent Function of HDAC3 , 2009, PloS one.
[12] E. Lander,et al. MicroRNA-15a and -16-1 act via MYB to elevate fetal hemoglobin expression in human trisomy 13 , 2011, Proceedings of the National Academy of Sciences.
[13] G. Stamatoyannopoulos,et al. Histone acetylation at the human β-globin locus changes with developmental age , 2004 .
[14] Hendrik G. Stunnenberg,et al. MBD2/NuRD and MBD3/NuRD, Two Distinct Complexes with Different Biochemical and Functional Properties , 2006, Molecular and Cellular Biology.
[15] Prim B. Singh,et al. KAP-1 Corepressor Protein Interacts and Colocalizes with Heterochromatic and Euchromatic HP1 Proteins: a Potential Role for Krüppel-Associated Box–Zinc Finger Proteins in Heterochromatin-Mediated Gene Silencing , 1999, Molecular and Cellular Biology.
[16] C. Gooding,et al. LCR/MEL: a versatile system for high-level expression of heterologous proteins in erythroid cells. , 1992, Nucleic acids research.
[17] R. Losson,et al. Interaction with members of the heterochromatin protein 1 (HP1) family and histone deacetylation are differentially involved in transcriptional silencing by members of the TIF1 family , 1999, The EMBO journal.
[18] Laurent Kiger,et al. Ex vivo generation of fully mature human red blood cells from hematopoietic stem cells , 2005, Nature Biotechnology.
[19] S. Schreiber,et al. Nuclear Receptor Repression Mediated by a Complex Containing SMRT, mSin3A, and Histone Deacetylase , 1997, Cell.
[20] Henriette O'Geen,et al. ZNF274 Recruits the Histone Methyltransferase SETDB1 to the 3′ Ends of ZNF Genes , 2010, PloS one.
[21] A. Shevchenko,et al. Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. , 1996, Analytical chemistry.
[22] S. Berger,et al. In vivo dual cross-linking for identification of indirect DNA-associated proteins by chromatin immunoprecipitation. , 2006, BioTechniques.
[23] P. Kingsley,et al. "Maturational" globin switching in primary primitive erythroid cells. , 2005, Blood.
[24] C. Glass,et al. Sensors and signals: a coactivator/corepressor/epigenetic code for integrating signal-dependent programs of transcriptional response. , 2006, Genes & development.
[25] E. Seto,et al. The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men , 2008, Nature Reviews Molecular Cell Biology.
[26] S. Kato,et al. p54nrb acts as a transcriptional coactivator for activation function 1 of the human androgen receptor. , 2003, Biochemical and biophysical research communications.
[27] En Li,et al. Suv 39 h-Mediated Histone H 3 Lysine 9 Methylation Directs DNA Methylation to Major Satellite Repeats at Pericentric Heterochromatin , 2003 .
[28] C. Glass,et al. A complex containing N-CoR, mSln3 and histone deacetylase mediates transcriptional repression , 1997, nature.
[29] S. Pradhan,et al. Epigenetic mechanisms in mammals , 2008, Cellular and Molecular Life Sciences.
[30] Arthur W. Nienhuis,et al. Hemoglobin switching , 1978, Cell.
[31] S. Kato,et al. Transrepressive Function of TLX Requires the Histone Demethylase LSD1 , 2008, Molecular and Cellular Biology.
[32] S. Orkin,et al. Transcriptional silencing of {gamma}-globin by BCL11A involves long-range interactions and cooperation with SOX6. , 2010, Genes & development.
[33] Dario Neri,et al. In vivo protein biotinylation for identification of organ-specific antigens accessible from the vasculature , 2005, Nature Methods.
[34] Luyang Sun,et al. LSD1 Is a Subunit of the NuRD Complex and Targets the Metastasis Programs in Breast Cancer , 2009, Cell.
[35] R. Neades,et al. Silencing of Aγ-Globin Gene Expression during Adult Definitive Erythropoiesis Mediated by GATA-1-FOG-1-Mi2 Complex Binding at the −566 GATA Site , 2008, Molecular and Cellular Biology.
[36] Li-Na Wei,et al. A Novel Nuclear Receptor Heterodimerization Pathway Mediated by Orphan Receptors TR2 and TR4* , 1998, The Journal of Biological Chemistry.
[37] G. Blobel,et al. FOG‐1 recruits the NuRD repressor complex to mediate transcriptional repression by GATA‐1 , 2005, The EMBO journal.
[38] M. Sutton,et al. Role of epigenetic modifications in normal globin gene regulation and butyrate-mediated induction of fetal hemoglobin. , 2007, Blood.
[39] F. Grosveld,et al. Fetal globin expression is regulated by Friend of Prmt1. , 2010, Blood.
[40] E. Bresnick,et al. Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain. , 2000, Proceedings of the National Academy of Sciences of the United States of America.
[41] Philip R. Gafken,et al. A Chicken Ovalbumin Upstream Promoter Transcription Factor I (COUP-TFI) Complex Represses Expression of the Gene Encoding Tumor Necrosis Factor α-induced Protein 8 (TNFAIP8)*♦ , 2009, Journal of Biological Chemistry.
[42] Chawnshang Chang,et al. Recent advances in the TR2 and TR4 orphan receptors of the nuclear receptor superfamily , 2002, The Journal of Steroid Biochemistry and Molecular Biology.
[43] F. Jeanmougin,et al. A possible involvement of TIF1 alpha and TIF1 beta in the epigenetic control of transcription by nuclear receptors. , 1996, The EMBO journal.
[44] Drew T. Erickson,et al. Sox6 Directly Silences Epsilon Globin Expression in Definitive Erythropoiesis , 2005, PLoS genetics.
[45] Chawnshang Chang,et al. Disruption of TR4 Orphan Nuclear Receptor Reduces the Expression of Liver Apolipoprotein E/C-I/C-II Gene Cluster* , 2003, Journal of Biological Chemistry.
[46] Sandip K. Mishra,et al. Transcriptional repression of oestrogen receptor by metastasis-associated protein 1 corepressor , 2000, Nature Cell Biology.
[47] James Douglas Engel,et al. The TR2 and TR4 orphan nuclear receptors repress Gata1 transcription. , 2007, Genes & development.
[48] W. Herr,et al. The VP16 accessory protein HCF is a family of polypeptides processed from a large precursor protein , 1993, Cell.
[49] Patrick Rodriguez,et al. Isolation of transcription factor complexes by in vivo biotinylation tagging and direct binding to streptavidin beads. , 2006, Methods in molecular biology.
[50] J. D. Engel,et al. An embryonic/fetal β‐type globin gene repressor contains a nuclear receptor TR2/TR4 heterodimer , 2002, The EMBO journal.
[51] H. Samuels,et al. PSF Is a Novel Corepressor That Mediates Its Effect through Sin3A and the DNA Binding Domain of Nuclear Hormone Receptors , 2001, Molecular and Cellular Biology.
[52] Paul A. Khavari,et al. BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription , 1993, Nature.
[53] D. Lavelle,et al. siDNMT1 increases γ-globin expression in chemical inducer of dimerization (CID)-dependent mouse βYAC bone marrow cells and in baboon erythroid progenitor cell cultures. , 2011, Experimental hematology.
[54] Peter L. Jones,et al. DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters , 2000, Nature Genetics.
[55] Chawnshang Chang,et al. Loss of TR4 Orphan Nuclear Receptor Reduces Phosphoenolpyruvate Carboxykinase–Mediated Gluconeogenesis , 2007, Diabetes.
[56] G. Patrinos,et al. A comparative study of Greek nondeletional hereditary persistence of fetal hemoglobin and β-thalassemia compound heterozygotes , 2002, Journal of Molecular Medicine.
[57] K. Chin,et al. SCF induces gamma-globin gene expression by regulating downstream transcription factor COUP-TFII. , 2009, Blood.
[58] F. Lan,et al. Regulation of LSD1 histone demethylase activity by its associated factors. , 2005, Molecular cell.
[59] D. Na,et al. Molecular Cloning and Characterization of CAPER, a Novel Coactivator of Activating Protein-1 and Estrogen Receptors* , 2002, The Journal of Biological Chemistry.
[60] Min Gyu Lee,et al. An essential role for CoREST in nucleosomal histone 3 lysine 4 demethylation , 2005, Nature.
[61] Yang Shi,et al. Histone Demethylation Mediated by the Nuclear Amine Oxidase Homolog LSD1 , 2004, Cell.
[62] S. Fiering,et al. Developmental- and differentiation-specific patterns of human γ- and β-globin promoter DNA methylation , 2007 .
[63] J. Davie,et al. Epigenetic control , 2009, Journal of cellular physiology.
[64] M. Groudine,et al. A Complex Chromatin Landscape Revealed by Patterns of Nuclease Sensitivity and Histone Modification within the Mouse β-Globin Locus , 2003, Molecular and Cellular Biology.
[65] R. Morimoto. Dynamic Remodeling of Transcription Complexes by Molecular Chaperones , 2002, Cell.
[66] Y. Saunthararajah,et al. DNA hypo‐methylating agents and sickle cell disease , 2004, British journal of haematology.
[67] F. Grosveld,et al. Haploinsufficiency for the erythroid transcription factor KLF1 causes Hereditary Persistence of Fetal Hemoglobin , 2010, Nature Genetics.
[68] J. Drouin,et al. TIF1β/KAP-1 Is a Coactivator of the Orphan Nuclear Receptor NGFI-B/Nur77* , 2009, Journal of Biological Chemistry.
[69] David I. K. Martin,et al. CpG Hypomethylation in a Large Domain Encompassing the Embryonic β-Like Globin Genes in Primitive Erythrocytes , 2007, Molecular and Cellular Biology.
[70] C. Glass,et al. The coregulator exchange in transcriptional functions of nuclear receptors. , 2000, Genes & development.
[71] J. D. Engel,et al. The Orphan Nuclear Receptor TR4 Is a Vitamin A-activated Nuclear Receptor*♦ , 2010, The Journal of Biological Chemistry.
[72] Gratien G. Prefontaine,et al. Histone Methylation-Dependent Mechanisms Impose Ligand Dependency for Gene Activation by Nuclear Receptors , 2007, Cell.
[73] Yi Zhang,et al. Dynamic Regulation of Histone H3 Methylated at Lysine 79 within a Tissue-specific Chromatin Domain* , 2003, The Journal of Biological Chemistry.
[74] J. Hirschhorn,et al. Supporting Online Material Materials and Methods Figs. S1 to S10 Tables S1 to S7 References Human Fetal Hemoglobin Expression Is Regulated by the Developmental Stage-specific Repressor Bcl11a , 2022 .
[75] J. D. Engel,et al. Fine Tuning of Globin Gene Expression by DNA Methylation , 2006, PloS one.
[76] J. Strouboulis,et al. Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription , 1998, Nature Genetics.
[77] G. Stamatoyannopoulos,et al. Regulation of embryonic/fetal globin genes by nuclear hormone receptors: a novel perspective on hemoglobin switching , 1999, The EMBO journal.
[78] M. Wasik,et al. STAT3- and DNA methyltransferase 1-mediated epigenetic silencing of SHP-1 tyrosine phosphatase tumor suppressor gene in malignant T lymphocytes. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[79] Henriette O'Geen,et al. Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes , 2010, BMC Genomics.
[80] J. D. Engel,et al. Context-dependent EKLF responsiveness defines the developmental specificity of the human epsilon-globin gene in erythroid cells of YAC transgenic mice. , 2000, Genes & development.
[81] Ann Dean,et al. Epigenetics of beta-globin gene regulation. , 2008, Mutation research.
[82] Cameron S. Osborne,et al. Intergenic Transcription, Cell-Cycle and the Developmentally Regulated Epigenetic Profile of the Human Beta-Globin Locus , 2007, PloS one.
[83] J. Ni,et al. TR4 nuclear receptor functions as a fatty acid sensor to modulate CD36 expression and foam cell formation , 2009, Proceedings of the National Academy of Sciences.
[84] J. D. Engel,et al. Adult Stage γ-Globin Silencing Is Mediated by a Promoter Direct Repeat Element , 2005, Molecular and Cellular Biology.
[85] E. Li,et al. The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation , 2009, Nature Genetics.
[86] Pawan Gupta,et al. Activation of testicular orphan receptor 4 by fatty acids. , 2009, Biochimica et biophysica acta.
[87] R. Ware,et al. Quantitative analysis of erythrocytes containing fetal hemoglobin (F cells) in children with sickle cell disease , 1997, American journal of hematology.
[88] Jonghwan Kim,et al. Epigenetic regulation of hematopoietic differentiation by Gfi-1 and Gfi-1b is mediated by the cofactors CoREST and LSD1. , 2007, Molecular cell.
[89] Jeroen Krijgsveld,et al. GATA‐1 forms distinct activating and repressive complexes in erythroid cells , 2005, The EMBO journal.
[90] Patrick Rodriguez,et al. Efficient biotinylation and single-step purification of tagged transcription factors in mammalian cells and transgenic mice , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[91] Luke Hughes-Davies,et al. DNA methyltransferase Dnmt1 associates with histone deacetylase activity , 2000, Nature Genetics.
[92] Y. Hung,et al. Subfertility with defective folliculogenesis in female mice lacking testicular orphan nuclear receptor 4. , 2008, Molecular endocrinology.
[93] Colin A. Johnson,et al. Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex , 1998, Nature.